RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
VARS2-207ENST00000476162 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
VARS2-207ENST00000476162 ADGRF5Q8IZF2 1346 aa21.52■■□□□ 1.03
VARS2-207ENST00000476162 HECW2Q9P2P5 1572 aa21.52■■□□□ 1.03
VARS2-207ENST00000476162 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
VARS2-207ENST00000476162 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
VARS2-207ENST00000476162 MYOM2P54296 1465 aa21.49■■□□□ 1.03
VARS2-207ENST00000476162 KIF1BO60333 1816 aa21.49■■□□□ 1.03
VARS2-207ENST00000476162 NPATQ14207 1427 aa21.48■■□□□ 1.03
VARS2-207ENST00000476162 NEO1Q92859 1461 aa21.48■■□□□ 1.03
VARS2-207ENST00000476162 MAP3K4Q9Y6R4 1608 aa21.48■■□□□ 1.03
VARS2-207ENST00000476162 CDCA8Q53HL2 280 aa21.48■■□□□ 1.03
VARS2-207ENST00000476162 KIAA1210Q9ULL0 1709 aa21.47■■□□□ 1.03
VARS2-207ENST00000476162 EIF3AQ14152 1382 aaKnown RBP21.47■■□□□ 1.03
VARS2-207ENST00000476162 PPP4R2Q9NY27 417 aa21.47■■□□□ 1.03
VARS2-207ENST00000476162 ABCA6Q8N139 1617 aa21.46■■□□□ 1.03
VARS2-207ENST00000476162 CHGAP10645 457 aaKnown RBP21.46■■□□□ 1.03
VARS2-207ENST00000476162 MROH2AA6NES4 1674 aa21.45■■□□□ 1.02
VARS2-207ENST00000476162 KNSTRNQ9Y448 316 aa21.44■■□□□ 1.02
VARS2-207ENST00000476162 IFT172Q9UG01 1749 aa21.42■■□□□ 1.02
VARS2-207ENST00000476162 ADGRB3O60242 1522 aa21.42■■□□□ 1.02
VARS2-207ENST00000476162 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
VARS2-207ENST00000476162 NOS1P29475 1434 aa21.42■■□□□ 1.02
VARS2-207ENST00000476162 CFAP65Q6ZU64 1925 aaKnown RBP21.41■■□□□ 1.02
VARS2-207ENST00000476162 NRXN1Q9ULB1 1477 aa21.41■■□□□ 1.02
VARS2-207ENST00000476162 ABCC3O15438 1527 aa21.41■■□□□ 1.02
VARS2-207ENST00000476162 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
VARS2-207ENST00000476162 RNF123Q5XPI4 1314 aa21.39■■□□□ 1.02
VARS2-207ENST00000476162 SYNMO15061 1565 aa21.39■■□□□ 1.02
VARS2-207ENST00000476162 AMER1Q5JTC6 1135 aaPredicted RBP21.39■■□□□ 1.01
VARS2-207ENST00000476162 FANCIQ9NVI1 1328 aa21.38■■□□□ 1.01
VARS2-207ENST00000476162 SLC24A1O60721 1099 aa21.37■■□□□ 1.01
VARS2-207ENST00000476162 DIP2CQ9Y2E4 1556 aa21.37■■□□□ 1.01
VARS2-207ENST00000476162 B4GALNT3Q6L9W6 998 aa21.36■■□□□ 1.01
VARS2-207ENST00000476162 ERVK-7P63135 1459 aa21.34■■□□□ 1.01
VARS2-207ENST00000476162 PPP2R1AP30153 589 aa21.34■■□□□ 1.01
VARS2-207ENST00000476162 MYOM1P52179 1685 aa21.34■■□□□ 1.01
VARS2-207ENST00000476162 RICTORQ6R327 1708 aa21.33■■□□□ 1.01
VARS2-207ENST00000476162 KDM5AP29375 1690 aaKnown RBP21.33■■□□□ 1.01
VARS2-207ENST00000476162 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1.01
VARS2-207ENST00000476162 PIK3C2GO75747 1445 aa21.33■■□□□ 1
VARS2-207ENST00000476162 YEATS2Q9ULM3 1422 aa21.33■■□□□ 1
VARS2-207ENST00000476162 INSRP06213 1382 aa21.33■■□□□ 1
VARS2-207ENST00000476162 C14orf93Q9H972 538 aaKnown RBP21.33■■□□□ 1
VARS2-207ENST00000476162 ASXL1Q8IXJ9 1541 aa21.32■■□□□ 1
VARS2-207ENST00000476162 RPGRIP1LQ68CZ1 1315 aa21.32■■□□□ 1
VARS2-207ENST00000476162 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
VARS2-207ENST00000476162 PPLO60437 1756 aa21.31■■□□□ 1
VARS2-207ENST00000476162 PDE3BQ13370 1112 aa21.31■■□□□ 1
VARS2-207ENST00000476162 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
VARS2-207ENST00000476162 SETBP1Q9Y6X0 1596 aa21.3■■□□□ 1
VARS2-207ENST00000476162 ZMYM4Q5VZL5 1548 aa21.3■■□□□ 1
VARS2-207ENST00000476162 SIGLEC1Q9BZZ2 1709 aa21.3■■□□□ 1
VARS2-207ENST00000476162 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
VARS2-207ENST00000476162 ADAMTS8Q9UP79 889 aa21.29■■□□□ 1
VARS2-207ENST00000476162 NPC1L1Q9UHC9 1359 aa21.29■■□□□ 1
VARS2-207ENST00000476162 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
VARS2-207ENST00000476162 TMEM132EQ6IEE7 984 aa21.28■■□□□ 1
VARS2-207ENST00000476162 GLI2P10070 1586 aa21.28■■□□□ 1
VARS2-207ENST00000476162 MYO3AQ8NEV4 1616 aa21.27■■□□□ 1
VARS2-207ENST00000476162 FAM69CQ0P6D2 419 aa21.27■■□□□ 1
VARS2-207ENST00000476162 NUTM2DQ5VT03 806 aaPredicted RBP21.27■■□□□ 1
VARS2-207ENST00000476162 CDCA7LQ96GN5 454 aa21.27■□□□□ 0.99
VARS2-207ENST00000476162 ARHGAP31Q2M1Z3 1444 aa21.26■□□□□ 0.99
VARS2-207ENST00000476162 CARD14Q9BXL6 1004 aa21.26■□□□□ 0.99
VARS2-207ENST00000476162 ADGRB1O14514 1584 aa21.26■□□□□ 0.99
VARS2-207ENST00000476162 DEKP35659 375 aaKnown RBP21.25■□□□□ 0.99
VARS2-207ENST00000476162 ANO8Q9HCE9 1232 aaPredicted RBP21.25■□□□□ 0.99
VARS2-207ENST00000476162 PIK3C2BO00750 1634 aa21.25■□□□□ 0.99
VARS2-207ENST00000476162 IDI1Q13907 227 aa21.25■□□□□ 0.99
VARS2-207ENST00000476162 RCAN3Q9UKA8 241 aa21.24■□□□□ 0.99
VARS2-207ENST00000476162 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
VARS2-207ENST00000476162 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
VARS2-207ENST00000476162 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
VARS2-207ENST00000476162 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
VARS2-207ENST00000476162 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
VARS2-207ENST00000476162 ZC3H13Q5T200 1668 aaKnown RBP21.21■□□□□ 0.99
VARS2-207ENST00000476162 RRP1P56182 461 aaKnown RBP21.21■□□□□ 0.99
VARS2-207ENST00000476162 NEXMIFQ5QGS0 1516 aa21.2■□□□□ 0.98
VARS2-207ENST00000476162 SLC52A1Q9NWF4 448 aa21.2■□□□□ 0.98
VARS2-207ENST00000476162 CCDC136Q96JN2 1154 aa21.19■□□□□ 0.98
VARS2-207ENST00000476162 QRICH2Q9H0J4 1663 aa21.17■□□□□ 0.98
VARS2-207ENST00000476162 DIP2BQ9P265 1576 aa21.17■□□□□ 0.98
VARS2-207ENST00000476162 SLC12A5Q9H2X9 1139 aa21.16■□□□□ 0.98
VARS2-207ENST00000476162 FBXO31Q5XUX0 539 aaPredicted RBP21.13■□□□□ 0.97
VARS2-207ENST00000476162 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
VARS2-207ENST00000476162 PLEKHH1Q9ULM0 1364 aa21.13■□□□□ 0.97
VARS2-207ENST00000476162 TSPOAP1O95153 1857 aa21.12■□□□□ 0.97
VARS2-207ENST00000476162 NSD3Q9BZ95 1437 aa21.12■□□□□ 0.97
VARS2-207ENST00000476162 PREX1Q8TCU6 1659 aa21.12■□□□□ 0.97
VARS2-207ENST00000476162 ZFYVE9O95405 1425 aa21.11■□□□□ 0.97
VARS2-207ENST00000476162 EXOC6Q8TAG9 804 aa21.1■□□□□ 0.97
VARS2-207ENST00000476162 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
VARS2-207ENST00000476162 EVC2Q86UK5 1308 aa21.09■□□□□ 0.97
VARS2-207ENST00000476162 ZNF521Q96K83 1311 aa21.09■□□□□ 0.97
VARS2-207ENST00000476162 TMEM131LA2VDJ0 1609 aa21.08■□□□□ 0.97
VARS2-207ENST00000476162 STK26Q9P289 416 aa21.08■□□□□ 0.96
VARS2-207ENST00000476162 ARHGEF28Q8N1W1 1705 aaKnown RBP21.08■□□□□ 0.96
VARS2-207ENST00000476162 MYO5BQ9ULV0 1848 aa21.07■□□□□ 0.96
VARS2-207ENST00000476162 SAFB2Q14151 953 aaKnown RBP eCLIP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms