RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 THEMISQ8N1K5 641 aaPredicted RBP20.36■□□□□ 0.85
SOD1-204ENST00000476106 TMEM131LA2VDJ0 1609 aa20.35■□□□□ 0.85
SOD1-204ENST00000476106 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
SOD1-204ENST00000476106 LRRC7Q96NW7 1537 aa20.33■□□□□ 0.85
SOD1-204ENST00000476106 MPHOSPH9Q99550 1183 aa20.33■□□□□ 0.85
SOD1-204ENST00000476106 NPHP4O75161 1426 aaPredicted RBP20.33■□□□□ 0.84
SOD1-204ENST00000476106 CHGAP10645 457 aaKnown RBP20.32■□□□□ 0.84
SOD1-204ENST00000476106 MED14O60244 1454 aa20.31■□□□□ 0.84
SOD1-204ENST00000476106 IDI1Q13907 227 aa20.31■□□□□ 0.84
SOD1-204ENST00000476106 UPF1Q92900 1129 aaKnown RBP eCLIP20.3■□□□□ 0.84
SOD1-204ENST00000476106 IQGAP1P46940 1657 aa20.28■□□□□ 0.84
SOD1-204ENST00000476106 ACIN1Q9UKV3 1341 aaKnown RBP20.27■□□□□ 0.83
SOD1-204ENST00000476106 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
SOD1-204ENST00000476106 SLIT1O75093 1534 aa20.25■□□□□ 0.83
SOD1-204ENST00000476106 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
SOD1-204ENST00000476106 FAM135BQ49AJ0 1406 aa20.24■□□□□ 0.83
SOD1-204ENST00000476106 CCDC144AA2RUR9 1427 aa20.23■□□□□ 0.83
SOD1-204ENST00000476106 SCAF11Q99590 1463 aaKnown RBP20.23■□□□□ 0.83
SOD1-204ENST00000476106 ARHGAP23Q9P227 1491 aa20.22■□□□□ 0.83
SOD1-204ENST00000476106 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
SOD1-204ENST00000476106 PPLO60437 1756 aa20.21■□□□□ 0.83
SOD1-204ENST00000476106 HRCP23327 699 aa20.21■□□□□ 0.83
SOD1-204ENST00000476106 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
SOD1-204ENST00000476106 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
SOD1-204ENST00000476106 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
SOD1-204ENST00000476106 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
SOD1-204ENST00000476106 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
SOD1-204ENST00000476106 STRCP1A6NGW2 1772 aa20.17■□□□□ 0.82
SOD1-204ENST00000476106 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
SOD1-204ENST00000476106 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
SOD1-204ENST00000476106 NEXMIFQ5QGS0 1516 aa20.16■□□□□ 0.82
SOD1-204ENST00000476106 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
SOD1-204ENST00000476106 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
SOD1-204ENST00000476106 LTKP29376 864 aa20.14■□□□□ 0.81
SOD1-204ENST00000476106 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
SOD1-204ENST00000476106 BCANQ96GW7 911 aa20.12■□□□□ 0.81
SOD1-204ENST00000476106 ZNF772Q68DY9 489 aaPredicted RBP20.11■□□□□ 0.81
SOD1-204ENST00000476106 DHX57Q6P158 1386 aaKnown RBP20.1■□□□□ 0.81
SOD1-204ENST00000476106 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
SOD1-204ENST00000476106 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
SOD1-204ENST00000476106 SPATA31E1Q6ZUB1 1445 aa20.08■□□□□ 0.8
SOD1-204ENST00000476106 JCADQ9P266 1359 aa20.07■□□□□ 0.8
SOD1-204ENST00000476106 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
SOD1-204ENST00000476106 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
SOD1-204ENST00000476106 RXRBP28702 533 aa20.03■□□□□ 0.8
SOD1-204ENST00000476106 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
SOD1-204ENST00000476106 SLC26A8Q96RN1 970 aa20.03■□□□□ 0.8
SOD1-204ENST00000476106 CHD2O14647 1828 aaKnown RBP20.03■□□□□ 0.8
SOD1-204ENST00000476106 DIP2AQ14689 1571 aa20.03■□□□□ 0.8
SOD1-204ENST00000476106 SETBP1Q9Y6X0 1596 aa20.03■□□□□ 0.8
SOD1-204ENST00000476106 MEX3CQ5U5Q3 659 aaKnown RBP20.02■□□□□ 0.8
SOD1-204ENST00000476106 ROBO1Q9Y6N7 1651 aa20■□□□□ 0.79
SOD1-204ENST00000476106 TMEM94Q12767 1356 aa19.99■□□□□ 0.79
SOD1-204ENST00000476106 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
SOD1-204ENST00000476106 XIRP1Q702N8 1843 aaKnown RBP19.98■□□□□ 0.79
SOD1-204ENST00000476106 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
SOD1-204ENST00000476106 NEUROD1Q13562 356 aa19.97■□□□□ 0.79
SOD1-204ENST00000476106 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
SOD1-204ENST00000476106 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
SOD1-204ENST00000476106 NWD1Q149M9 1564 aa19.96■□□□□ 0.79
SOD1-204ENST00000476106 MYOM2P54296 1465 aa19.95■□□□□ 0.78
SOD1-204ENST00000476106 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
SOD1-204ENST00000476106 ADGRF5Q8IZF2 1346 aa19.95■□□□□ 0.78
SOD1-204ENST00000476106 LAMC1P11047 1609 aa19.94■□□□□ 0.78
SOD1-204ENST00000476106 SRCAPQ6ZRS2 3230 aa19.94■□□□□ 0.78
SOD1-204ENST00000476106 VGFO15240 615 aaPredicted RBP19.94■□□□□ 0.78
SOD1-204ENST00000476106 PROSER2Q86WR7 435 aaPredicted RBP19.94■□□□□ 0.78
SOD1-204ENST00000476106 KCNA6P17658 529 aa19.93■□□□□ 0.78
SOD1-204ENST00000476106 SLAIN2Q9P270 581 aa19.93■□□□□ 0.78
SOD1-204ENST00000476106 KDM2AQ9Y2K7 1162 aa19.93■□□□□ 0.78
SOD1-204ENST00000476106 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
SOD1-204ENST00000476106 PIK3C2GO75747 1445 aa19.91■□□□□ 0.78
SOD1-204ENST00000476106 DCAF11Q8TEB1 546 aa19.9■□□□□ 0.78
SOD1-204ENST00000476106 ZRANB1Q9UGI0 708 aa19.9■□□□□ 0.78
SOD1-204ENST00000476106 PHLPP1O60346 1717 aa19.9■□□□□ 0.78
SOD1-204ENST00000476106 ASXL1Q8IXJ9 1541 aa19.88■□□□□ 0.77
SOD1-204ENST00000476106 METP08581 1390 aa19.88■□□□□ 0.77
SOD1-204ENST00000476106 MSH6P52701 1360 aa19.88■□□□□ 0.77
SOD1-204ENST00000476106 LRP6O75581 1613 aa19.87■□□□□ 0.77
SOD1-204ENST00000476106 NKTRP30414 1462 aaKnown RBP19.87■□□□□ 0.77
SOD1-204ENST00000476106 NRXN1Q9ULB1 1477 aa19.87■□□□□ 0.77
SOD1-204ENST00000476106 TBX22Q9Y458 520 aa19.87■□□□□ 0.77
SOD1-204ENST00000476106 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
SOD1-204ENST00000476106 KNDC1Q76NI1 1749 aa19.85■□□□□ 0.77
SOD1-204ENST00000476106 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
SOD1-204ENST00000476106 RBM33Q96EV2 1170 aaKnown RBP19.85■□□□□ 0.77
SOD1-204ENST00000476106 TONSLQ96HA7 1378 aa19.83■□□□□ 0.76
SOD1-204ENST00000476106 NALCNQ8IZF0 1738 aa19.82■□□□□ 0.76
SOD1-204ENST00000476106 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
SOD1-204ENST00000476106 PIK3R4Q99570 1358 aa19.82■□□□□ 0.76
SOD1-204ENST00000476106 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
SOD1-204ENST00000476106 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
SOD1-204ENST00000476106 TRPM1Q7Z4N2 1603 aa19.8■□□□□ 0.76
SOD1-204ENST00000476106 NUTM2BA6NNL0 878 aaPredicted RBP19.8■□□□□ 0.76
SOD1-204ENST00000476106 NUTM2EB1AL46 878 aaPredicted RBP19.8■□□□□ 0.76
SOD1-204ENST00000476106 CFAP70Q5T0N1 1121 aa19.8■□□□□ 0.76
SOD1-204ENST00000476106 TMEM132EQ6IEE7 984 aa19.8■□□□□ 0.76
SOD1-204ENST00000476106 NUTM2AQ8IVF1 878 aaPredicted RBP19.8■□□□□ 0.76
SOD1-204ENST00000476106 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
SOD1-204ENST00000476106 PRAG1Q86YV5 1406 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms