RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 SPHKAPQ2M3C7 1700 aa17.37■□□□□ 0.37
MRPL55-227ENST00000475832 CFAP65Q6ZU64 1925 aaKnown RBP17.37■□□□□ 0.37
MRPL55-227ENST00000475832 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-227ENST00000475832 DCAF11Q8TEB1 546 aa17.35■□□□□ 0.37
MRPL55-227ENST00000475832 SYNMO15061 1565 aa17.35■□□□□ 0.37
MRPL55-227ENST00000475832 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
MRPL55-227ENST00000475832 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
MRPL55-227ENST00000475832 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
MRPL55-227ENST00000475832 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
MRPL55-227ENST00000475832 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
MRPL55-227ENST00000475832 SLC52A1Q9NWF4 448 aa17.32■□□□□ 0.36
MRPL55-227ENST00000475832 IDI1Q13907 227 aa17.31■□□□□ 0.36
MRPL55-227ENST00000475832 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
MRPL55-227ENST00000475832 PIK3C2BO00750 1634 aa17.3■□□□□ 0.36
MRPL55-227ENST00000475832 NEURL4Q96JN8 1562 aa17.3■□□□□ 0.36
MRPL55-227ENST00000475832 MED14O60244 1454 aa17.3■□□□□ 0.36
MRPL55-227ENST00000475832 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
MRPL55-227ENST00000475832 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
MRPL55-227ENST00000475832 CHGAP10645 457 aaKnown RBP17.29■□□□□ 0.36
MRPL55-227ENST00000475832 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
MRPL55-227ENST00000475832 SLIT1O75093 1534 aa17.29■□□□□ 0.36
MRPL55-227ENST00000475832 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
MRPL55-227ENST00000475832 POLR1AO95602 1720 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-227ENST00000475832 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
MRPL55-227ENST00000475832 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
MRPL55-227ENST00000475832 CPS1P31327 1500 aa17.26■□□□□ 0.35
MRPL55-227ENST00000475832 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
MRPL55-227ENST00000475832 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
MRPL55-227ENST00000475832 NBPF8Q3BBV2 869 aa17.25■□□□□ 0.35
MRPL55-227ENST00000475832 RGS17Q9UGC6 210 aaPredicted RBP17.25■□□□□ 0.35
MRPL55-227ENST00000475832 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
MRPL55-227ENST00000475832 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
MRPL55-227ENST00000475832 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-227ENST00000475832 KIF1BO60333 1816 aa17.22■□□□□ 0.35
MRPL55-227ENST00000475832 LTKP29376 864 aa17.22■□□□□ 0.35
MRPL55-227ENST00000475832 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
MRPL55-227ENST00000475832 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.35
MRPL55-227ENST00000475832 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
MRPL55-227ENST00000475832 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
MRPL55-227ENST00000475832 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
MRPL55-227ENST00000475832 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
MRPL55-227ENST00000475832 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
MRPL55-227ENST00000475832 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
MRPL55-227ENST00000475832 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
MRPL55-227ENST00000475832 MYOM2P54296 1465 aa17.18■□□□□ 0.34
MRPL55-227ENST00000475832 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
MRPL55-227ENST00000475832 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
MRPL55-227ENST00000475832 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
MRPL55-227ENST00000475832 MYO5BQ9ULV0 1848 aa17.14■□□□□ 0.34
MRPL55-227ENST00000475832 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
MRPL55-227ENST00000475832 POTEAQ6S8J7 498 aa17.14■□□□□ 0.33
MRPL55-227ENST00000475832 USP47Q96K76 1375 aa17.14■□□□□ 0.33
MRPL55-227ENST00000475832 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
MRPL55-227ENST00000475832 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
MRPL55-227ENST00000475832 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
MRPL55-227ENST00000475832 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
MRPL55-227ENST00000475832 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-227ENST00000475832 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
MRPL55-227ENST00000475832 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
MRPL55-227ENST00000475832 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
MRPL55-227ENST00000475832 LAMC1P11047 1609 aa17.07■□□□□ 0.32
MRPL55-227ENST00000475832 NRXN1Q9ULB1 1477 aa17.07■□□□□ 0.32
MRPL55-227ENST00000475832 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
MRPL55-227ENST00000475832 EIF3AQ14152 1382 aaKnown RBP17.06■□□□□ 0.32
MRPL55-227ENST00000475832 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
MRPL55-227ENST00000475832 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
MRPL55-227ENST00000475832 STRCP1A6NGW2 1772 aa17.05■□□□□ 0.32
MRPL55-227ENST00000475832 KIAA1210Q9ULL0 1709 aa17.05■□□□□ 0.32
MRPL55-227ENST00000475832 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
MRPL55-227ENST00000475832 PPLO60437 1756 aa17.05■□□□□ 0.32
MRPL55-227ENST00000475832 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
MRPL55-227ENST00000475832 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
MRPL55-227ENST00000475832 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
MRPL55-227ENST00000475832 SLC26A8Q96RN1 970 aa17.03■□□□□ 0.32
MRPL55-227ENST00000475832 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
MRPL55-227ENST00000475832 ST20-MTHFSA0A0A6YYL1 179 aa17.02■□□□□ 0.32
MRPL55-227ENST00000475832 TBX22Q9Y458 520 aa17.02■□□□□ 0.32
MRPL55-227ENST00000475832 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
MRPL55-227ENST00000475832 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-227ENST00000475832 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
MRPL55-227ENST00000475832 KCNA6P17658 529 aa17■□□□□ 0.31
MRPL55-227ENST00000475832 NWD1Q149M9 1564 aa17■□□□□ 0.31
MRPL55-227ENST00000475832 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
MRPL55-227ENST00000475832 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
MRPL55-227ENST00000475832 PIK3R4Q99570 1358 aa16.99■□□□□ 0.31
MRPL55-227ENST00000475832 BCANQ96GW7 911 aa16.98■□□□□ 0.31
MRPL55-227ENST00000475832 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
MRPL55-227ENST00000475832 CCDC7Q96M83 1385 aa16.98■□□□□ 0.31
MRPL55-227ENST00000475832 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
MRPL55-227ENST00000475832 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.31
MRPL55-227ENST00000475832 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
MRPL55-227ENST00000475832 TMF1P82094 1093 aa16.96■□□□□ 0.31
MRPL55-227ENST00000475832 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
MRPL55-227ENST00000475832 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.3
MRPL55-227ENST00000475832 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.3
MRPL55-227ENST00000475832 POLR3GLQ9BT43 218 aa16.94■□□□□ 0.3
MRPL55-227ENST00000475832 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
MRPL55-227ENST00000475832 XIRP1Q702N8 1843 aaKnown RBP16.92■□□□□ 0.3
MRPL55-227ENST00000475832 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
MRPL55-227ENST00000475832 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms