RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 XIRP1Q702N8 1843 aaKnown RBP11.24□□□□□ -0.61
UBE4B-208ENST00000475795 EFCAB6Q5THR3 1501 aa11.24□□□□□ -0.61
UBE4B-208ENST00000475795 MED1Q15648 1581 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-208ENST00000475795 LTKP29376 864 aa11.23□□□□□ -0.61
UBE4B-208ENST00000475795 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
UBE4B-208ENST00000475795 CAPN15O75808 1086 aa11.22□□□□□ -0.61
UBE4B-208ENST00000475795 TXNDC2Q86VQ3 553 aa11.22□□□□□ -0.61
UBE4B-208ENST00000475795 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
UBE4B-208ENST00000475795 EID1Q9Y6B2 187 aa11.21□□□□□ -0.61
UBE4B-208ENST00000475795 ADGRB3O60242 1522 aa11.2□□□□□ -0.62
UBE4B-208ENST00000475795 NOS1P29475 1434 aa11.2□□□□□ -0.62
UBE4B-208ENST00000475795 MYO5BQ9ULV0 1848 aa11.2□□□□□ -0.62
UBE4B-208ENST00000475795 IDI1Q13907 227 aa11.19□□□□□ -0.62
UBE4B-208ENST00000475795 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
UBE4B-208ENST00000475795 TET3O43151 1660 aa11.19□□□□□ -0.62
UBE4B-208ENST00000475795 GCC2Q8IWJ2 1684 aa11.19□□□□□ -0.62
UBE4B-208ENST00000475795 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
UBE4B-208ENST00000475795 FAM50AQ14320 339 aaKnown RBP11.18□□□□□ -0.62
UBE4B-208ENST00000475795 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
UBE4B-208ENST00000475795 UNC13BO14795 1591 aa11.17□□□□□ -0.62
UBE4B-208ENST00000475795 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
UBE4B-208ENST00000475795 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
UBE4B-208ENST00000475795 SLC52A1Q9NWF4 448 aa11.15□□□□□ -0.62
UBE4B-208ENST00000475795 E9PCH4 1651 aa11.14□□□□□ -0.63
UBE4B-208ENST00000475795 CHD2O14647 1828 aaKnown RBP11.14□□□□□ -0.63
UBE4B-208ENST00000475795 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
UBE4B-208ENST00000475795 NKTRP30414 1462 aaKnown RBP11.13□□□□□ -0.63
UBE4B-208ENST00000475795 ZFYVE9O95405 1425 aa11.13□□□□□ -0.63
UBE4B-208ENST00000475795 KCNA6P17658 529 aa11.13□□□□□ -0.63
UBE4B-208ENST00000475795 TMEM94Q12767 1356 aa11.13□□□□□ -0.63
UBE4B-208ENST00000475795 IQGAP3Q86VI3 1631 aa11.13□□□□□ -0.63
UBE4B-208ENST00000475795 ROCK1Q13464 1354 aa11.12□□□□□ -0.63
UBE4B-208ENST00000475795 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
UBE4B-208ENST00000475795 SLC26A8Q96RN1 970 aa11.11□□□□□ -0.63
UBE4B-208ENST00000475795 ROBO1Q9Y6N7 1651 aa11.11□□□□□ -0.63
UBE4B-208ENST00000475795 RIMS2Q9UQ26 1411 aa11.1□□□□□ -0.63
UBE4B-208ENST00000475795 PLEKHG1Q9ULL1 1385 aa11.1□□□□□ -0.63
UBE4B-208ENST00000475795 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
UBE4B-208ENST00000475795 BCANQ96GW7 911 aa11.08□□□□□ -0.64
UBE4B-208ENST00000475795 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
UBE4B-208ENST00000475795 PPP1R15AO75807 674 aaPredicted RBP11.07□□□□□ -0.64
UBE4B-208ENST00000475795 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
UBE4B-208ENST00000475795 ZNF219Q9P2Y4 722 aaPredicted RBP11.07□□□□□ -0.64
UBE4B-208ENST00000475795 MSH6P52701 1360 aa11.06□□□□□ -0.64
UBE4B-208ENST00000475795 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
UBE4B-208ENST00000475795 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
UBE4B-208ENST00000475795 PHLPP1O60346 1717 aa11.05□□□□□ -0.64
UBE4B-208ENST00000475795 ADAMTS13Q76LX8 1427 aa11.05□□□□□ -0.64
UBE4B-208ENST00000475795 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBE4B-208ENST00000475795 NUP155O75694 1391 aa11.04□□□□□ -0.64
UBE4B-208ENST00000475795 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
UBE4B-208ENST00000475795 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
UBE4B-208ENST00000475795 NCOA3Q9Y6Q9 1424 aa11.03□□□□□ -0.64
UBE4B-208ENST00000475795 RGS17Q9UGC6 210 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-208ENST00000475795 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-208ENST00000475795 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
UBE4B-208ENST00000475795 ITGAEP38570 1179 aa11.02□□□□□ -0.65
UBE4B-208ENST00000475795 TRPM2O94759 1503 aa11.02□□□□□ -0.65
UBE4B-208ENST00000475795 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.65
UBE4B-208ENST00000475795 NUTM2DQ5VT03 806 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-208ENST00000475795 SLAIN2Q9P270 581 aa11.01□□□□□ -0.65
UBE4B-208ENST00000475795 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-208ENST00000475795 COL16A1Q07092 1604 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-208ENST00000475795 SETBP1Q9Y6X0 1596 aa11□□□□□ -0.65
UBE4B-208ENST00000475795 ATXN8OSP0DMR3 200 aa11□□□□□ -0.65
UBE4B-208ENST00000475795 XRN1Q8IZH2 1706 aaKnown RBP11□□□□□ -0.65
UBE4B-208ENST00000475795 ABCB7O75027 752 aa10.99□□□□□ -0.65
UBE4B-208ENST00000475795 PPARGC1BQ86YN6 1023 aaKnown RBP10.99□□□□□ -0.65
UBE4B-208ENST00000475795 KIF1BO60333 1816 aa10.99□□□□□ -0.65
UBE4B-208ENST00000475795 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
UBE4B-208ENST00000475795 CLTCL1P53675 1640 aa10.98□□□□□ -0.65
UBE4B-208ENST00000475795 JCADQ9P266 1359 aa10.98□□□□□ -0.65
UBE4B-208ENST00000475795 RRBP1Q9P2E9 1410 aaKnown RBP10.98□□□□□ -0.65
UBE4B-208ENST00000475795 AHDC1Q5TGY3 1603 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-208ENST00000475795 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
UBE4B-208ENST00000475795 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
UBE4B-208ENST00000475795 C19orf44Q9H6X5 657 aa10.97□□□□□ -0.65
UBE4B-208ENST00000475795 SHPRHQ149N8 1683 aa10.96□□□□□ -0.65
UBE4B-208ENST00000475795 NEXMIFQ5QGS0 1516 aa10.96□□□□□ -0.65
UBE4B-208ENST00000475795 POTEAQ6S8J7 498 aa10.96□□□□□ -0.65
UBE4B-208ENST00000475795 AMOTL2Q9Y2J4 779 aa10.96□□□□□ -0.65
UBE4B-208ENST00000475795 DCCP43146 1447 aa10.95□□□□□ -0.66
UBE4B-208ENST00000475795 ATF3P18847 181 aa10.95□□□□□ -0.66
UBE4B-208ENST00000475795 NAIPQ13075 1403 aa10.94□□□□□ -0.66
UBE4B-208ENST00000475795 ZNF326Q5BKZ1 582 aaKnown RBP10.94□□□□□ -0.66
UBE4B-208ENST00000475795 SETD1AO15047 1707 aaKnown RBP10.93□□□□□ -0.66
UBE4B-208ENST00000475795 LRP6O75581 1613 aa10.93□□□□□ -0.66
UBE4B-208ENST00000475795 NHSL1Q5SYE7 1610 aa10.93□□□□□ -0.66
UBE4B-208ENST00000475795 NALCNQ8IZF0 1738 aa10.92□□□□□ -0.66
UBE4B-208ENST00000475795 METP08581 1390 aa10.92□□□□□ -0.66
UBE4B-208ENST00000475795 SPATA31A6Q5VVP1 1343 aa10.92□□□□□ -0.66
UBE4B-208ENST00000475795 ASXL1Q8IXJ9 1541 aa10.92□□□□□ -0.66
UBE4B-208ENST00000475795 DSG3P32926 999 aa10.91□□□□□ -0.66
UBE4B-208ENST00000475795 BRINP3Q76B58 766 aa10.91□□□□□ -0.66
UBE4B-208ENST00000475795 HFM1A2PYH4 1435 aa10.91□□□□□ -0.66
UBE4B-208ENST00000475795 MST1RQ04912 1400 aa10.91□□□□□ -0.66
UBE4B-208ENST00000475795 PPLO60437 1756 aa10.9□□□□□ -0.66
UBE4B-208ENST00000475795 ADGRL3Q9HAR2 1447 aa10.9□□□□□ -0.66
UBE4B-208ENST00000475795 POLA2Q14181 598 aa10.88□□□□□ -0.67
UBE4B-208ENST00000475795 SETD5Q9C0A6 1442 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms