RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MAGI3Q5TCQ9 1506 aa14.28□□□□□ -0.12
U2AF1-209ENST00000475639 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
U2AF1-209ENST00000475639 PDE4CQ08493 712 aa14.27□□□□□ -0.12
U2AF1-209ENST00000475639 PLEKHH2Q8IVE3 1493 aa14.27□□□□□ -0.12
U2AF1-209ENST00000475639 IGHDP01880 384 aa14.27□□□□□ -0.13
U2AF1-209ENST00000475639 DUSP27Q5VZP5 1158 aa14.27□□□□□ -0.13
U2AF1-209ENST00000475639 GRIN2BQ13224 1484 aa14.27□□□□□ -0.13
U2AF1-209ENST00000475639 CARD11Q9BXL7 1154 aa14.26□□□□□ -0.13
U2AF1-209ENST00000475639 INSRP06213 1382 aa14.26□□□□□ -0.13
U2AF1-209ENST00000475639 ST20-MTHFSA0A0A6YYL1 179 aa14.25□□□□□ -0.13
U2AF1-209ENST00000475639 TBC1D32Q96NH3 1257 aa14.25□□□□□ -0.13
U2AF1-209ENST00000475639 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
U2AF1-209ENST00000475639 CTTNBP2Q8WZ74 1663 aa14.24□□□□□ -0.13
U2AF1-209ENST00000475639 EIF3AQ14152 1382 aaKnown RBP14.24□□□□□ -0.13
U2AF1-209ENST00000475639 RALGAPBQ86X10 1494 aa14.23□□□□□ -0.13
U2AF1-209ENST00000475639 OFD1O75665 1012 aa14.23□□□□□ -0.13
U2AF1-209ENST00000475639 FAM13BQ9NYF5 915 aa14.23□□□□□ -0.13
U2AF1-209ENST00000475639 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
U2AF1-209ENST00000475639 PLEKHH1Q9ULM0 1364 aa14.22□□□□□ -0.13
U2AF1-209ENST00000475639 PER1O15534 1290 aaPredicted RBP14.21□□□□□ -0.13
U2AF1-209ENST00000475639 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
U2AF1-209ENST00000475639 SMAP1Q8IYB5 467 aaPredicted RBP14.21□□□□□ -0.13
U2AF1-209ENST00000475639 RASSF8Q8NHQ8 419 aa14.21□□□□□ -0.13
U2AF1-209ENST00000475639 CHMP5Q9NZZ3 219 aa14.21□□□□□ -0.13
U2AF1-209ENST00000475639 PZPP20742 1482 aa14.21□□□□□ -0.14
U2AF1-209ENST00000475639 MAP7D2Q96T17 732 aa14.2□□□□□ -0.14
U2AF1-209ENST00000475639 CSPP1Q1MSJ5 1256 aa14.2□□□□□ -0.14
U2AF1-209ENST00000475639 ZHX1Q9UKY1 873 aaPredicted RBP14.2□□□□□ -0.14
U2AF1-209ENST00000475639 UHRF1BP1Q6BDS2 1440 aa14.2□□□□□ -0.14
U2AF1-209ENST00000475639 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
U2AF1-209ENST00000475639 TERF1P54274 439 aa14.19□□□□□ -0.14
U2AF1-209ENST00000475639 GPS2Q13227 327 aa14.19□□□□□ -0.14
U2AF1-209ENST00000475639 ROCK1Q13464 1354 aa14.18□□□□□ -0.14
U2AF1-209ENST00000475639 DDX11L8A8MPP1 907 aa14.18□□□□□ -0.14
U2AF1-209ENST00000475639 CC2D1BQ5T0F9 858 aaKnown RBP14.18□□□□□ -0.14
U2AF1-209ENST00000475639 ZSCAN30Q86W11 494 aa14.18□□□□□ -0.14
U2AF1-209ENST00000475639 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
U2AF1-209ENST00000475639 ZNF521Q96K83 1311 aa14.18□□□□□ -0.14
U2AF1-209ENST00000475639 SAMD9Q5K651 1589 aa14.17□□□□□ -0.14
U2AF1-209ENST00000475639 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.17□□□□□ -0.14
U2AF1-209ENST00000475639 RRP12Q5JTH9 1297 aaKnown RBP14.17□□□□□ -0.14
U2AF1-209ENST00000475639 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
U2AF1-209ENST00000475639 DAPK1P53355 1430 aa14.16□□□□□ -0.14
U2AF1-209ENST00000475639 APBB1O00213 710 aa14.16□□□□□ -0.14
U2AF1-209ENST00000475639 TSR1Q2NL82 804 aaKnown RBP14.16□□□□□ -0.14
U2AF1-209ENST00000475639 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
U2AF1-209ENST00000475639 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
U2AF1-209ENST00000475639 HDAC5Q9UQL6 1122 aa14.16□□□□□ -0.14
U2AF1-209ENST00000475639 PLEKHD1A6NEE1 506 aa14.16□□□□□ -0.14
U2AF1-209ENST00000475639 BCAR3O75815 825 aa14.16□□□□□ -0.14
U2AF1-209ENST00000475639 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.14
U2AF1-209ENST00000475639 PPP1R9BQ96SB3 815 aa14.15□□□□□ -0.14
U2AF1-209ENST00000475639 CREBRFQ8IUR6 639 aa14.15□□□□□ -0.14
U2AF1-209ENST00000475639 R3HCC1Q9Y3T6 440 aaKnown RBP14.15□□□□□ -0.14
U2AF1-209ENST00000475639 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
U2AF1-209ENST00000475639 CCDC173Q0VFZ6 552 aa14.14□□□□□ -0.15
U2AF1-209ENST00000475639 KIAA1107Q9UPP5 1409 aa14.14□□□□□ -0.15
U2AF1-209ENST00000475639 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
U2AF1-209ENST00000475639 RWDD1Q9H446 243 aaPredicted RBP14.14□□□□□ -0.15
U2AF1-209ENST00000475639 PHF14O94880 888 aa14.14□□□□□ -0.15
U2AF1-209ENST00000475639 CCDC70Q6NSX1 233 aa14.14□□□□□ -0.15
U2AF1-209ENST00000475639 RTEL1-TNFRSF6BF6WH68 1400 aa14.13□□□□□ -0.15
U2AF1-209ENST00000475639 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
U2AF1-209ENST00000475639 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
U2AF1-209ENST00000475639 SLFN5Q08AF3 891 aa14.13□□□□□ -0.15
U2AF1-209ENST00000475639 SF3A1Q15459 793 aaKnown RBP14.13□□□□□ -0.15
U2AF1-209ENST00000475639 TMX4Q9H1E5 349 aaPredicted RBP14.13□□□□□ -0.15
U2AF1-209ENST00000475639 ABCC5O15440 1437 aa14.13□□□□□ -0.15
U2AF1-209ENST00000475639 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
U2AF1-209ENST00000475639 CLUAP1Q96AJ1 413 aa14.12□□□□□ -0.15
U2AF1-209ENST00000475639 UQCRHLA0A096LP55 91 aa14.11□□□□□ -0.15
U2AF1-209ENST00000475639 UQCRHP07919 91 aa14.11□□□□□ -0.15
U2AF1-209ENST00000475639 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
U2AF1-209ENST00000475639 PATL2C9JE40 543 aaKnown RBP14.11□□□□□ -0.15
U2AF1-209ENST00000475639 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
U2AF1-209ENST00000475639 MARCH6O60337 910 aa14.11□□□□□ -0.15
U2AF1-209ENST00000475639 CCAR2Q8N163 923 aaKnown RBP14.11□□□□□ -0.15
U2AF1-209ENST00000475639 DMTNQ08495 405 aa14.11□□□□□ -0.15
U2AF1-209ENST00000475639 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
U2AF1-209ENST00000475639 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
U2AF1-209ENST00000475639 DDIT3P35638 169 aa14.1□□□□□ -0.15
U2AF1-209ENST00000475639 BBXQ8WY36 941 aaPredicted RBP14.1□□□□□ -0.15
U2AF1-209ENST00000475639 NASPP49321 788 aaPredicted RBP14.1□□□□□ -0.15
U2AF1-209ENST00000475639 UTP14CQ5TAP6 766 aaKnown RBP14.1□□□□□ -0.15
U2AF1-209ENST00000475639 TPM1P09493 284 aa14.1□□□□□ -0.15
U2AF1-209ENST00000475639 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
U2AF1-209ENST00000475639 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
U2AF1-209ENST00000475639 PKD2Q13563 968 aa14.09□□□□□ -0.15
U2AF1-209ENST00000475639 PES1O00541 588 aaKnown RBP14.09□□□□□ -0.15
U2AF1-209ENST00000475639 TNPO1Q92973 898 aaKnown RBP14.09□□□□□ -0.15
U2AF1-209ENST00000475639 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
U2AF1-209ENST00000475639 IPO7O95373 1038 aaKnown RBP14.09□□□□□ -0.15
U2AF1-209ENST00000475639 ZSCAN20P17040 1043 aaPredicted RBP14.09□□□□□ -0.15
U2AF1-209ENST00000475639 TMF1P82094 1093 aa14.09□□□□□ -0.15
U2AF1-209ENST00000475639 NCOA3Q9Y6Q9 1424 aa14.08□□□□□ -0.15
U2AF1-209ENST00000475639 MTERF4Q7Z6M4 381 aaKnown RBP14.08□□□□□ -0.15
U2AF1-209ENST00000475639 NKTRP30414 1462 aaKnown RBP14.08□□□□□ -0.15
U2AF1-209ENST00000475639 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
U2AF1-209ENST00000475639 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
U2AF1-209ENST00000475639 CUL7Q14999 1698 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms