RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 SCAF11Q99590 1463 aaKnown RBP25.15■■□□□ 1.62
SEC61A2-213ENST00000475268 KIAA1210Q9ULL0 1709 aa25.15■■□□□ 1.62
SEC61A2-213ENST00000475268 SYNMO15061 1565 aa25.15■■□□□ 1.62
SEC61A2-213ENST00000475268 TMF1P82094 1093 aa25.14■■□□□ 1.62
SEC61A2-213ENST00000475268 REREQ9P2R6 1566 aa25.13■■□□□ 1.61
SEC61A2-213ENST00000475268 MRS2Q9HD23 443 aa25.11■■□□□ 1.61
SEC61A2-213ENST00000475268 NRXN1Q9ULB1 1477 aa25.11■■□□□ 1.61
SEC61A2-213ENST00000475268 PIK3C2BO00750 1634 aa25.11■■□□□ 1.61
SEC61A2-213ENST00000475268 AGLP35573 1532 aa25.1■■□□□ 1.61
SEC61A2-213ENST00000475268 RPGRIP1LQ68CZ1 1315 aa25.09■■□□□ 1.61
SEC61A2-213ENST00000475268 IDI1Q13907 227 aa25.08■■□□□ 1.61
SEC61A2-213ENST00000475268 PPLO60437 1756 aa25.08■■□□□ 1.61
SEC61A2-213ENST00000475268 EIF3AQ14152 1382 aaKnown RBP25.08■■□□□ 1.6
SEC61A2-213ENST00000475268 SLC52A1Q9NWF4 448 aa25.07■■□□□ 1.6
SEC61A2-213ENST00000475268 PREX1Q8TCU6 1659 aa25.06■■□□□ 1.6
SEC61A2-213ENST00000475268 MLECQ14165 292 aa25.05■■□□□ 1.6
SEC61A2-213ENST00000475268 ARHGEF40Q8TER5 1519 aa25.05■■□□□ 1.6
SEC61A2-213ENST00000475268 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
SEC61A2-213ENST00000475268 PPP6R1Q9UPN7 881 aa25.04■■□□□ 1.6
SEC61A2-213ENST00000475268 PIK3C2GO75747 1445 aa25.03■■□□□ 1.6
SEC61A2-213ENST00000475268 HNRNPUQ00839 825 aaKnown RBP eCLIP25.03■■□□□ 1.6
SEC61A2-213ENST00000475268 FAM9BQ8IZU0 186 aa25.03■■□□□ 1.6
SEC61A2-213ENST00000475268 NUTM2DQ5VT03 806 aaPredicted RBP25.02■■□□□ 1.6
SEC61A2-213ENST00000475268 C14orf93Q9H972 538 aaKnown RBP25■■□□□ 1.59
SEC61A2-213ENST00000475268 CLTCQ00610 1675 aaKnown RBP24.99■■□□□ 1.59
SEC61A2-213ENST00000475268 VGFO15240 615 aaPredicted RBP24.99■■□□□ 1.59
SEC61A2-213ENST00000475268 PANK3Q9H999 370 aa24.99■■□□□ 1.59
SEC61A2-213ENST00000475268 NEXMIFQ5QGS0 1516 aa24.99■■□□□ 1.59
SEC61A2-213ENST00000475268 CDCA8Q53HL2 280 aa24.98■■□□□ 1.59
SEC61A2-213ENST00000475268 ERVK-7P63135 1459 aa24.98■■□□□ 1.59
SEC61A2-213ENST00000475268 PER1O15534 1290 aaPredicted RBP24.98■■□□□ 1.59
SEC61A2-213ENST00000475268 SETBP1Q9Y6X0 1596 aa24.98■■□□□ 1.59
SEC61A2-213ENST00000475268 RALBP1Q15311 655 aa24.96■■□□□ 1.59
SEC61A2-213ENST00000475268 KTN1Q86UP2 1357 aaKnown RBP24.96■■□□□ 1.59
SEC61A2-213ENST00000475268 TMEM132EQ6IEE7 984 aa24.94■■□□□ 1.58
SEC61A2-213ENST00000475268 TMEM131LA2VDJ0 1609 aa24.94■■□□□ 1.58
SEC61A2-213ENST00000475268 TRAK1Q9UPV9 953 aa24.93■■□□□ 1.58
SEC61A2-213ENST00000475268 MYO5BQ9ULV0 1848 aa24.92■■□□□ 1.58
SEC61A2-213ENST00000475268 SLC24A1O60721 1099 aa24.92■■□□□ 1.58
SEC61A2-213ENST00000475268 ADGRB1O14514 1584 aa24.92■■□□□ 1.58
SEC61A2-213ENST00000475268 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
SEC61A2-213ENST00000475268 ESF1Q9H501 851 aaKnown RBP24.91■■□□□ 1.58
SEC61A2-213ENST00000475268 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
SEC61A2-213ENST00000475268 STAG3Q9UJ98 1225 aa24.9■■□□□ 1.58
SEC61A2-213ENST00000475268 CENPJQ9HC77 1338 aaPredicted RBP24.89■■□□□ 1.58
SEC61A2-213ENST00000475268 PARD3Q8TEW0 1356 aa24.88■■□□□ 1.57
SEC61A2-213ENST00000475268 MYO3AQ8NEV4 1616 aa24.88■■□□□ 1.57
SEC61A2-213ENST00000475268 ZFYVE9O95405 1425 aa24.88■■□□□ 1.57
SEC61A2-213ENST00000475268 CC2D1BQ5T0F9 858 aaKnown RBP24.88■■□□□ 1.57
SEC61A2-213ENST00000475268 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
SEC61A2-213ENST00000475268 KDM5AP29375 1690 aaKnown RBP24.86■■□□□ 1.57
SEC61A2-213ENST00000475268 SPATA31D1Q6ZQQ2 1576 aa24.86■■□□□ 1.57
SEC61A2-213ENST00000475268 SBNO2Q9Y2G9 1366 aa24.85■■□□□ 1.57
SEC61A2-213ENST00000475268 BRD4O60885 1362 aaPredicted RBP24.84■■□□□ 1.57
SEC61A2-213ENST00000475268 TRHP20396 242 aaPredicted RBP24.84■■□□□ 1.57
SEC61A2-213ENST00000475268 ZMYM3Q14202 1370 aa24.84■■□□□ 1.57
SEC61A2-213ENST00000475268 PNISRQ8TF01 805 aaKnown RBP24.83■■□□□ 1.57
SEC61A2-213ENST00000475268 KNSTRNQ9Y448 316 aa24.83■■□□□ 1.57
SEC61A2-213ENST00000475268 MYOM1P52179 1685 aa24.82■■□□□ 1.56
SEC61A2-213ENST00000475268 NLRP13Q86W25 1043 aa24.81■■□□□ 1.56
SEC61A2-213ENST00000475268 QRICH2Q9H0J4 1663 aa24.8■■□□□ 1.56
SEC61A2-213ENST00000475268 ZBED9Q6R2W3 1325 aa24.77■■□□□ 1.56
SEC61A2-213ENST00000475268 A2ML1A8K2U0 1454 aa24.77■■□□□ 1.56
SEC61A2-213ENST00000475268 STK26Q9P289 416 aa24.76■■□□□ 1.55
SEC61A2-213ENST00000475268 AMER1Q5JTC6 1135 aaPredicted RBP24.74■■□□□ 1.55
SEC61A2-213ENST00000475268 SUPT16HQ9Y5B9 1047 aaKnown RBP24.74■■□□□ 1.55
SEC61A2-213ENST00000475268 ASXL1Q8IXJ9 1541 aa24.74■■□□□ 1.55
SEC61A2-213ENST00000475268 ARHGEF28Q8N1W1 1705 aaKnown RBP24.74■■□□□ 1.55
SEC61A2-213ENST00000475268 RIMS2Q9UQ26 1411 aa24.71■■□□□ 1.55
SEC61A2-213ENST00000475268 LRPPRCP42704 1394 aaKnown RBP24.71■■□□□ 1.55
SEC61A2-213ENST00000475268 SAFB2Q14151 953 aaKnown RBP eCLIP24.7■■□□□ 1.54
SEC61A2-213ENST00000475268 ALKQ9UM73 1620 aa24.69■■□□□ 1.54
SEC61A2-213ENST00000475268 TNRQ92752 1358 aa24.69■■□□□ 1.54
SEC61A2-213ENST00000475268 CARD14Q9BXL6 1004 aa24.67■■□□□ 1.54
SEC61A2-213ENST00000475268 EVC2Q86UK5 1308 aa24.67■■□□□ 1.54
SEC61A2-213ENST00000475268 YTHDC2Q9H6S0 1430 aaKnown RBP24.67■■□□□ 1.54
SEC61A2-213ENST00000475268 NPC1L1Q9UHC9 1359 aa24.65■■□□□ 1.54
SEC61A2-213ENST00000475268 SENP3-EIF4A1A0A087X0R7 540 aa24.65■■□□□ 1.54
SEC61A2-213ENST00000475268 FKBP8Q14318 412 aa24.65■■□□□ 1.54
SEC61A2-213ENST00000475268 NEFLP07196 543 aa24.64■■□□□ 1.54
SEC61A2-213ENST00000475268 SLC12A5Q9H2X9 1139 aa24.64■■□□□ 1.54
SEC61A2-213ENST00000475268 PPP2R1AP30153 589 aa24.64■■□□□ 1.53
SEC61A2-213ENST00000475268 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
SEC61A2-213ENST00000475268 PRAM1Q96QH2 718 aa24.63■■□□□ 1.53
SEC61A2-213ENST00000475268 PTPRMP28827 1452 aa24.63■■□□□ 1.53
SEC61A2-213ENST00000475268 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.63■■□□□ 1.53
SEC61A2-213ENST00000475268 POGKQ9P215 609 aa24.63■■□□□ 1.53
SEC61A2-213ENST00000475268 CEBPAP49715 358 aaPredicted RBP24.61■■□□□ 1.53
SEC61A2-213ENST00000475268 PUS7Q96PZ0 661 aaKnown RBP24.61■■□□□ 1.53
SEC61A2-213ENST00000475268 CABP2Q9NPB3 220 aa24.6■■□□□ 1.53
SEC61A2-213ENST00000475268 HDGFP51858 240 aaKnown RBP24.59■■□□□ 1.53
SEC61A2-213ENST00000475268 MINK1Q8N4C8 1332 aaPredicted RBP24.58■■□□□ 1.53
SEC61A2-213ENST00000475268 NSD3Q9BZ95 1437 aa24.57■■□□□ 1.52
SEC61A2-213ENST00000475268 SRPK2P78362 688 aaKnown RBP24.56■■□□□ 1.52
SEC61A2-213ENST00000475268 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
SEC61A2-213ENST00000475268 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
SEC61A2-213ENST00000475268 SETD1AO15047 1707 aaKnown RBP24.54■■□□□ 1.52
SEC61A2-213ENST00000475268 TMEM2Q9UHN6 1383 aa24.54■■□□□ 1.52
SEC61A2-213ENST00000475268 NRXN3Q9Y4C0 1643 aa24.53■■□□□ 1.52
SEC61A2-213ENST00000475268 BCANQ96GW7 911 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms