RNA–Protein interactions for RNA: ENST00000474937.1

NIN-209, Transcript of ninein, humanhuman

TSL 3

Gene NIN, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-209ENST00000474937 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
NIN-209ENST00000474937 KCNA6P17658 529 aa19.04■□□□□ 0.64
NIN-209ENST00000474937 E9PCH4 1651 aa19.04■□□□□ 0.64
NIN-209ENST00000474937 TMEM131LA2VDJ0 1609 aa19.03■□□□□ 0.64
NIN-209ENST00000474937 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
NIN-209ENST00000474937 BCANQ96GW7 911 aa19.02■□□□□ 0.64
NIN-209ENST00000474937 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
NIN-209ENST00000474937 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.01■□□□□ 0.63
NIN-209ENST00000474937 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
NIN-209ENST00000474937 CHGAP10645 457 aaKnown RBP19■□□□□ 0.63
NIN-209ENST00000474937 ILDR2Q71H61 639 aa19■□□□□ 0.63
NIN-209ENST00000474937 TMEM94Q12767 1356 aa18.98■□□□□ 0.63
NIN-209ENST00000474937 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
NIN-209ENST00000474937 MYO5BQ9ULV0 1848 aa18.97■□□□□ 0.63
NIN-209ENST00000474937 XIRP1Q702N8 1843 aaKnown RBP18.97■□□□□ 0.63
NIN-209ENST00000474937 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
NIN-209ENST00000474937 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
NIN-209ENST00000474937 NWD1Q149M9 1564 aa18.94■□□□□ 0.62
NIN-209ENST00000474937 NAIPQ13075 1403 aa18.94■□□□□ 0.62
NIN-209ENST00000474937 FAM135BQ49AJ0 1406 aa18.91■□□□□ 0.62
NIN-209ENST00000474937 NUTM2DQ5VT03 806 aaPredicted RBP18.91■□□□□ 0.62
NIN-209ENST00000474937 SOCS7O14512 581 aa18.9■□□□□ 0.62
NIN-209ENST00000474937 RBM33Q96EV2 1170 aaKnown RBP18.9■□□□□ 0.62
NIN-209ENST00000474937 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
NIN-209ENST00000474937 ADAMTS13Q76LX8 1427 aa18.9■□□□□ 0.62
NIN-209ENST00000474937 CHD2O14647 1828 aaKnown RBP18.89■□□□□ 0.61
NIN-209ENST00000474937 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
NIN-209ENST00000474937 DIP2AQ14689 1571 aa18.89■□□□□ 0.61
NIN-209ENST00000474937 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.61
NIN-209ENST00000474937 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
NIN-209ENST00000474937 MSH6P52701 1360 aa18.88■□□□□ 0.61
NIN-209ENST00000474937 NCOA3Q9Y6Q9 1424 aa18.86■□□□□ 0.61
NIN-209ENST00000474937 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
NIN-209ENST00000474937 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
NIN-209ENST00000474937 TRPM2O94759 1503 aa18.84■□□□□ 0.61
NIN-209ENST00000474937 SLAIN2Q9P270 581 aa18.83■□□□□ 0.6
NIN-209ENST00000474937 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
NIN-209ENST00000474937 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
NIN-209ENST00000474937 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
NIN-209ENST00000474937 SETBP1Q9Y6X0 1596 aa18.8■□□□□ 0.6
NIN-209ENST00000474937 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
NIN-209ENST00000474937 C14orf37Q86TY3 774 aa18.79■□□□□ 0.6
NIN-209ENST00000474937 C19orf44Q9H6X5 657 aa18.79■□□□□ 0.6
NIN-209ENST00000474937 PTPRUQ92729 1446 aa18.78■□□□□ 0.6
NIN-209ENST00000474937 CADPS2Q86UW7 1296 aa18.77■□□□□ 0.6
NIN-209ENST00000474937 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
NIN-209ENST00000474937 NEXMIFQ5QGS0 1516 aa18.76■□□□□ 0.59
NIN-209ENST00000474937 KIF1BO60333 1816 aa18.75■□□□□ 0.59
NIN-209ENST00000474937 ATF3P18847 181 aa18.75■□□□□ 0.59
NIN-209ENST00000474937 METP08581 1390 aa18.74■□□□□ 0.59
NIN-209ENST00000474937 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
NIN-209ENST00000474937 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
NIN-209ENST00000474937 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
NIN-209ENST00000474937 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.71■□□□□ 0.59
NIN-209ENST00000474937 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
NIN-209ENST00000474937 DCCP43146 1447 aa18.7■□□□□ 0.58
NIN-209ENST00000474937 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
NIN-209ENST00000474937 PHLPP1O60346 1717 aa18.68■□□□□ 0.58
NIN-209ENST00000474937 JCADQ9P266 1359 aa18.68■□□□□ 0.58
NIN-209ENST00000474937 RGS17Q9UGC6 210 aaPredicted RBP18.66■□□□□ 0.58
NIN-209ENST00000474937 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
NIN-209ENST00000474937 BRINP3Q76B58 766 aa18.64■□□□□ 0.57
NIN-209ENST00000474937 COL16A1Q07092 1604 aaPredicted RBP18.63■□□□□ 0.57
NIN-209ENST00000474937 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
NIN-209ENST00000474937 ADGRL3Q9HAR2 1447 aa18.63■□□□□ 0.57
NIN-209ENST00000474937 PTCH1Q13635 1447 aa18.62■□□□□ 0.57
NIN-209ENST00000474937 SETD5Q9C0A6 1442 aa18.62■□□□□ 0.57
NIN-209ENST00000474937 PPLO60437 1756 aa18.61■□□□□ 0.57
NIN-209ENST00000474937 MST1RQ04912 1400 aa18.61■□□□□ 0.57
NIN-209ENST00000474937 SPATA31E1Q6ZUB1 1445 aa18.6■□□□□ 0.57
NIN-209ENST00000474937 PRAG1Q86YV5 1406 aa18.6■□□□□ 0.57
NIN-209ENST00000474937 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
NIN-209ENST00000474937 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
NIN-209ENST00000474937 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
NIN-209ENST00000474937 RGL3Q3MIN7 710 aa18.59■□□□□ 0.57
NIN-209ENST00000474937 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.57
NIN-209ENST00000474937 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.56
NIN-209ENST00000474937 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
NIN-209ENST00000474937 NALCNQ8IZF0 1738 aa18.55■□□□□ 0.56
NIN-209ENST00000474937 POTEAQ6S8J7 498 aa18.55■□□□□ 0.56
NIN-209ENST00000474937 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
NIN-209ENST00000474937 LRRC59Q96AG4 307 aaKnown RBP18.53■□□□□ 0.56
NIN-209ENST00000474937 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
NIN-209ENST00000474937 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
NIN-209ENST00000474937 ADRA2BP18089 450 aa18.52■□□□□ 0.56
NIN-209ENST00000474937 MEX3CQ5U5Q3 659 aaKnown RBP18.51■□□□□ 0.55
NIN-209ENST00000474937 LRP6O75581 1613 aa18.51■□□□□ 0.55
NIN-209ENST00000474937 NHSL1Q5SYE7 1610 aa18.51■□□□□ 0.55
NIN-209ENST00000474937 IFT172Q9UG01 1749 aa18.5■□□□□ 0.55
NIN-209ENST00000474937 TECPR2O15040 1411 aa18.49■□□□□ 0.55
NIN-209ENST00000474937 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
NIN-209ENST00000474937 LRPPRCP42704 1394 aaKnown RBP18.49■□□□□ 0.55
NIN-209ENST00000474937 ABCC11Q96J66 1382 aa18.48■□□□□ 0.55
NIN-209ENST00000474937 DDX17Q92841 729 aaKnown RBP18.48■□□□□ 0.55
NIN-209ENST00000474937 HRCP23327 699 aa18.47■□□□□ 0.55
NIN-209ENST00000474937 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
NIN-209ENST00000474937 ORAI2Q96SN7 254 aa18.47■□□□□ 0.55
NIN-209ENST00000474937 STK26Q9P289 416 aa18.47■□□□□ 0.55
NIN-209ENST00000474937 NUTM2BA6NNL0 878 aaPredicted RBP18.46■□□□□ 0.55
NIN-209ENST00000474937 NUTM2EB1AL46 878 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms