RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
COL8A1-206ENST00000474648 NLRP1Q9C000 1473 aa14.5□□□□□ -0.09
COL8A1-206ENST00000474648 A2ML1A8K2U0 1454 aa14.47□□□□□ -0.09
COL8A1-206ENST00000474648 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
COL8A1-206ENST00000474648 RPGRIP1LQ68CZ1 1315 aa14.45□□□□□ -0.1
COL8A1-206ENST00000474648 ZNF326Q5BKZ1 582 aaKnown RBP14.45□□□□□ -0.1
COL8A1-206ENST00000474648 THEMISQ8N1K5 641 aaPredicted RBP14.45□□□□□ -0.1
COL8A1-206ENST00000474648 ADGRB3O60242 1522 aa14.45□□□□□ -0.1
COL8A1-206ENST00000474648 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
COL8A1-206ENST00000474648 TMEM131LA2VDJ0 1609 aa14.44□□□□□ -0.1
COL8A1-206ENST00000474648 NEURL4Q96JN8 1562 aa14.44□□□□□ -0.1
COL8A1-206ENST00000474648 PPP1R15AO75807 674 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-206ENST00000474648 DCAF11Q8TEB1 546 aa14.44□□□□□ -0.1
COL8A1-206ENST00000474648 SETD1BQ9UPS6 1966 aaKnown RBP14.43□□□□□ -0.1
COL8A1-206ENST00000474648 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
COL8A1-206ENST00000474648 UHRF1BP1Q6BDS2 1440 aa14.42□□□□□ -0.1
COL8A1-206ENST00000474648 MYCNP04198 464 aaPredicted RBP14.42□□□□□ -0.1
COL8A1-206ENST00000474648 STAC3Q96MF2 364 aa14.42□□□□□ -0.1
COL8A1-206ENST00000474648 TMEM2Q9UHN6 1383 aa14.42□□□□□ -0.1
COL8A1-206ENST00000474648 MYO3AQ8NEV4 1616 aa14.41□□□□□ -0.1
COL8A1-206ENST00000474648 LTKP29376 864 aa14.41□□□□□ -0.1
COL8A1-206ENST00000474648 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
COL8A1-206ENST00000474648 NUTM2DQ5VT03 806 aaPredicted RBP14.41□□□□□ -0.1
COL8A1-206ENST00000474648 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
COL8A1-206ENST00000474648 CEP170BQ9Y4F5 1589 aaPredicted RBP14.4□□□□□ -0.1
COL8A1-206ENST00000474648 NBPF8Q3BBV2 869 aa14.4□□□□□ -0.1
COL8A1-206ENST00000474648 ZFYVE9O95405 1425 aa14.4□□□□□ -0.1
COL8A1-206ENST00000474648 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
COL8A1-206ENST00000474648 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
COL8A1-206ENST00000474648 TXNDC2Q86VQ3 553 aa14.39□□□□□ -0.11
COL8A1-206ENST00000474648 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
COL8A1-206ENST00000474648 UBR1Q8IWV7 1749 aa14.38□□□□□ -0.11
COL8A1-206ENST00000474648 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
COL8A1-206ENST00000474648 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL8A1-206ENST00000474648 KIF1BO60333 1816 aa14.38□□□□□ -0.11
COL8A1-206ENST00000474648 SLIT1O75093 1534 aa14.37□□□□□ -0.11
COL8A1-206ENST00000474648 NEXMIFQ5QGS0 1516 aa14.37□□□□□ -0.11
COL8A1-206ENST00000474648 KDM5AP29375 1690 aaKnown RBP14.37□□□□□ -0.11
COL8A1-206ENST00000474648 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
COL8A1-206ENST00000474648 LMTK3Q96Q04 1460 aa14.37□□□□□ -0.11
COL8A1-206ENST00000474648 HSPA2P54652 639 aa14.36□□□□□ -0.11
COL8A1-206ENST00000474648 ANKLE2Q86XL3 938 aa14.35□□□□□ -0.11
COL8A1-206ENST00000474648 EID1Q9Y6B2 187 aa14.35□□□□□ -0.11
COL8A1-206ENST00000474648 NRXN1Q9ULB1 1477 aa14.35□□□□□ -0.11
COL8A1-206ENST00000474648 ZNF142P52746 1687 aaPredicted RBP14.35□□□□□ -0.11
COL8A1-206ENST00000474648 MYOM2P54296 1465 aa14.34□□□□□ -0.11
COL8A1-206ENST00000474648 MYO5BQ9ULV0 1848 aa14.34□□□□□ -0.11
COL8A1-206ENST00000474648 PRAG1Q86YV5 1406 aa14.33□□□□□ -0.11
COL8A1-206ENST00000474648 C14orf93Q9H972 538 aaKnown RBP14.33□□□□□ -0.12
COL8A1-206ENST00000474648 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.12
COL8A1-206ENST00000474648 CFAP70Q5T0N1 1121 aa14.32□□□□□ -0.12
COL8A1-206ENST00000474648 NBPF1Q3BBV0 1214 aa14.31□□□□□ -0.12
COL8A1-206ENST00000474648 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
COL8A1-206ENST00000474648 PLEKHG1Q9ULL1 1385 aa14.31□□□□□ -0.12
COL8A1-206ENST00000474648 PIK3C2GO75747 1445 aa14.31□□□□□ -0.12
COL8A1-206ENST00000474648 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
COL8A1-206ENST00000474648 PPLO60437 1756 aa14.3□□□□□ -0.12
COL8A1-206ENST00000474648 IFT172Q9UG01 1749 aa14.29□□□□□ -0.12
COL8A1-206ENST00000474648 CAPN15O75808 1086 aa14.28□□□□□ -0.12
COL8A1-206ENST00000474648 ADAMTS13Q76LX8 1427 aa14.28□□□□□ -0.12
COL8A1-206ENST00000474648 MED14O60244 1454 aa14.27□□□□□ -0.12
COL8A1-206ENST00000474648 BCANQ96GW7 911 aa14.27□□□□□ -0.13
COL8A1-206ENST00000474648 SLC26A8Q96RN1 970 aa14.27□□□□□ -0.13
COL8A1-206ENST00000474648 TBX22Q9Y458 520 aa14.27□□□□□ -0.13
COL8A1-206ENST00000474648 TMEM132EQ6IEE7 984 aa14.26□□□□□ -0.13
COL8A1-206ENST00000474648 NPHP4O75161 1426 aaPredicted RBP14.25□□□□□ -0.13
COL8A1-206ENST00000474648 SETBP1Q9Y6X0 1596 aa14.25□□□□□ -0.13
COL8A1-206ENST00000474648 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
COL8A1-206ENST00000474648 RALGAPBQ86X10 1494 aa14.24□□□□□ -0.13
COL8A1-206ENST00000474648 METP08581 1390 aa14.23□□□□□ -0.13
COL8A1-206ENST00000474648 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
COL8A1-206ENST00000474648 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
COL8A1-206ENST00000474648 CARD11Q9BXL7 1154 aa14.22□□□□□ -0.13
COL8A1-206ENST00000474648 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
COL8A1-206ENST00000474648 ADGRB1O14514 1584 aa14.21□□□□□ -0.14
COL8A1-206ENST00000474648 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
COL8A1-206ENST00000474648 PTPRUQ92729 1446 aa14.19□□□□□ -0.14
COL8A1-206ENST00000474648 ASXL1Q8IXJ9 1541 aa14.19□□□□□ -0.14
COL8A1-206ENST00000474648 STRCQ7RTU9 1775 aa14.19□□□□□ -0.14
COL8A1-206ENST00000474648 STK26Q9P289 416 aa14.18□□□□□ -0.14
COL8A1-206ENST00000474648 LRPPRCP42704 1394 aaKnown RBP14.18□□□□□ -0.14
COL8A1-206ENST00000474648 ABCC11Q96J66 1382 aa14.18□□□□□ -0.14
COL8A1-206ENST00000474648 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
COL8A1-206ENST00000474648 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
COL8A1-206ENST00000474648 TRAK1Q9UPV9 953 aa14.17□□□□□ -0.14
COL8A1-206ENST00000474648 AMOTL2Q9Y2J4 779 aa14.17□□□□□ -0.14
COL8A1-206ENST00000474648 PIK3R4Q99570 1358 aa14.17□□□□□ -0.14
COL8A1-206ENST00000474648 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
COL8A1-206ENST00000474648 KCNA6P17658 529 aa14.16□□□□□ -0.14
COL8A1-206ENST00000474648 SIRT1Q96EB6 747 aa14.16□□□□□ -0.14
COL8A1-206ENST00000474648 SETD1AO15047 1707 aaKnown RBP14.15□□□□□ -0.14
COL8A1-206ENST00000474648 DIP2AQ14689 1571 aa14.15□□□□□ -0.14
COL8A1-206ENST00000474648 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
COL8A1-206ENST00000474648 POLR1AO95602 1720 aaPredicted RBP14.15□□□□□ -0.14
COL8A1-206ENST00000474648 USP47Q96K76 1375 aa14.14□□□□□ -0.15
COL8A1-206ENST00000474648 ST20-MTHFSA0A0A6YYL1 179 aa14.14□□□□□ -0.15
COL8A1-206ENST00000474648 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL8A1-206ENST00000474648 LAMC1P11047 1609 aa14.14□□□□□ -0.15
COL8A1-206ENST00000474648 WAPLQ7Z5K2 1190 aa14.13□□□□□ -0.15
COL8A1-206ENST00000474648 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms