RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 KDM5AP29375 1690 aaKnown RBP14.62□□□□□ -0.07
COL12A1-206ENST00000474564 ANKLE2Q86XL3 938 aa14.62□□□□□ -0.07
COL12A1-206ENST00000474564 TMEM2Q9UHN6 1383 aa14.61□□□□□ -0.07
COL12A1-206ENST00000474564 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
COL12A1-206ENST00000474564 RIMS2Q9UQ26 1411 aa14.61□□□□□ -0.07
COL12A1-206ENST00000474564 MYOM2P54296 1465 aa14.61□□□□□ -0.07
COL12A1-206ENST00000474564 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
COL12A1-206ENST00000474564 PRAG1Q86YV5 1406 aa14.59□□□□□ -0.07
COL12A1-206ENST00000474564 NBPF8Q3BBV2 869 aa14.59□□□□□ -0.07
COL12A1-206ENST00000474564 NUTM2DQ5VT03 806 aaPredicted RBP14.59□□□□□ -0.07
COL12A1-206ENST00000474564 CARD11Q9BXL7 1154 aa14.59□□□□□ -0.07
COL12A1-206ENST00000474564 CEP170BQ9Y4F5 1589 aaPredicted RBP14.59□□□□□ -0.07
COL12A1-206ENST00000474564 MYO3AQ8NEV4 1616 aa14.59□□□□□ -0.07
COL12A1-206ENST00000474564 EIF4G2P78344 907 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL12A1-206ENST00000474564 ADGRF5Q8IZF2 1346 aa14.58□□□□□ -0.08
COL12A1-206ENST00000474564 UBR1Q8IWV7 1749 aa14.56□□□□□ -0.08
COL12A1-206ENST00000474564 SLC24A1O60721 1099 aa14.56□□□□□ -0.08
COL12A1-206ENST00000474564 C14orf93Q9H972 538 aaKnown RBP14.56□□□□□ -0.08
COL12A1-206ENST00000474564 NEXMIFQ5QGS0 1516 aa14.55□□□□□ -0.08
COL12A1-206ENST00000474564 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
COL12A1-206ENST00000474564 PPLO60437 1756 aa14.54□□□□□ -0.08
COL12A1-206ENST00000474564 SLIT1O75093 1534 aa14.53□□□□□ -0.08
COL12A1-206ENST00000474564 RALGAPBQ86X10 1494 aa14.53□□□□□ -0.08
COL12A1-206ENST00000474564 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.08
COL12A1-206ENST00000474564 SCAF11Q99590 1463 aaKnown RBP14.52□□□□□ -0.08
COL12A1-206ENST00000474564 PIK3C2GO75747 1445 aa14.52□□□□□ -0.08
COL12A1-206ENST00000474564 EIF3AQ14152 1382 aaKnown RBP14.52□□□□□ -0.08
COL12A1-206ENST00000474564 PLEKHG1Q9ULL1 1385 aa14.52□□□□□ -0.08
COL12A1-206ENST00000474564 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
COL12A1-206ENST00000474564 ARHGAP23Q9P227 1491 aa14.51□□□□□ -0.09
COL12A1-206ENST00000474564 NRXN1Q9ULB1 1477 aa14.51□□□□□ -0.09
COL12A1-206ENST00000474564 IFT172Q9UG01 1749 aa14.51□□□□□ -0.09
COL12A1-206ENST00000474564 MYO5BQ9ULV0 1848 aa14.5□□□□□ -0.09
COL12A1-206ENST00000474564 LTKP29376 864 aa14.5□□□□□ -0.09
COL12A1-206ENST00000474564 NBPF1Q3BBV0 1214 aa14.5□□□□□ -0.09
COL12A1-206ENST00000474564 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
COL12A1-206ENST00000474564 TBX22Q9Y458 520 aa14.5□□□□□ -0.09
COL12A1-206ENST00000474564 LAMC1P11047 1609 aa14.49□□□□□ -0.09
COL12A1-206ENST00000474564 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
COL12A1-206ENST00000474564 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
COL12A1-206ENST00000474564 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
COL12A1-206ENST00000474564 GPRASP1Q5JY77 1395 aa14.47□□□□□ -0.09
COL12A1-206ENST00000474564 TRPM1Q7Z4N2 1603 aa14.47□□□□□ -0.09
COL12A1-206ENST00000474564 USP47Q96K76 1375 aa14.47□□□□□ -0.09
COL12A1-206ENST00000474564 HSPA5P11021 654 aaKnown RBP14.46□□□□□ -0.09
COL12A1-206ENST00000474564 TMEM132EQ6IEE7 984 aa14.46□□□□□ -0.09
COL12A1-206ENST00000474564 SLC26A8Q96RN1 970 aa14.46□□□□□ -0.09
COL12A1-206ENST00000474564 STK26Q9P289 416 aa14.46□□□□□ -0.09
COL12A1-206ENST00000474564 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
COL12A1-206ENST00000474564 POGKQ9P215 609 aa14.45□□□□□ -0.1
COL12A1-206ENST00000474564 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
COL12A1-206ENST00000474564 NCKAP5LQ9HCH0 1330 aa14.44□□□□□ -0.1
COL12A1-206ENST00000474564 NPHP4O75161 1426 aaPredicted RBP14.44□□□□□ -0.1
COL12A1-206ENST00000474564 HSPA2P54652 639 aa14.44□□□□□ -0.1
COL12A1-206ENST00000474564 CDCA8Q53HL2 280 aa14.44□□□□□ -0.1
COL12A1-206ENST00000474564 ALKQ9UM73 1620 aa14.44□□□□□ -0.1
COL12A1-206ENST00000474564 PIK3R4Q99570 1358 aa14.43□□□□□ -0.1
COL12A1-206ENST00000474564 ST20-MTHFSA0A0A6YYL1 179 aa14.42□□□□□ -0.1
COL12A1-206ENST00000474564 TMF1P82094 1093 aa14.42□□□□□ -0.1
COL12A1-206ENST00000474564 DIP2AQ14689 1571 aa14.42□□□□□ -0.1
COL12A1-206ENST00000474564 CENPJQ9HC77 1338 aaPredicted RBP14.41□□□□□ -0.1
COL12A1-206ENST00000474564 SIRT1Q96EB6 747 aa14.41□□□□□ -0.1
COL12A1-206ENST00000474564 LRPPRCP42704 1394 aaKnown RBP14.41□□□□□ -0.1
COL12A1-206ENST00000474564 YTHDC2Q9H6S0 1430 aaKnown RBP14.41□□□□□ -0.1
COL12A1-206ENST00000474564 MED14O60244 1454 aa14.4□□□□□ -0.1
COL12A1-206ENST00000474564 LMTK3Q96Q04 1460 aa14.4□□□□□ -0.1
COL12A1-206ENST00000474564 ABCC11Q96J66 1382 aa14.4□□□□□ -0.1
COL12A1-206ENST00000474564 HIRIP3Q9BW71 556 aaPredicted RBP14.39□□□□□ -0.11
COL12A1-206ENST00000474564 AMOTL2Q9Y2J4 779 aa14.39□□□□□ -0.11
COL12A1-206ENST00000474564 ADAMTS13Q76LX8 1427 aa14.38□□□□□ -0.11
COL12A1-206ENST00000474564 METP08581 1390 aa14.37□□□□□ -0.11
COL12A1-206ENST00000474564 PRAM1Q96QH2 718 aa14.37□□□□□ -0.11
COL12A1-206ENST00000474564 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
COL12A1-206ENST00000474564 ADGRB1O14514 1584 aa14.36□□□□□ -0.11
COL12A1-206ENST00000474564 KCNA6P17658 529 aa14.36□□□□□ -0.11
COL12A1-206ENST00000474564 POLR3GLQ9BT43 218 aa14.36□□□□□ -0.11
COL12A1-206ENST00000474564 EVC2Q86UK5 1308 aa14.36□□□□□ -0.11
COL12A1-206ENST00000474564 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
COL12A1-206ENST00000474564 FAM135BQ49AJ0 1406 aa14.34□□□□□ -0.11
COL12A1-206ENST00000474564 NRXN3Q9Y4C0 1643 aa14.33□□□□□ -0.11
COL12A1-206ENST00000474564 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
COL12A1-206ENST00000474564 SAFB2Q14151 953 aaKnown RBP eCLIP14.33□□□□□ -0.12
COL12A1-206ENST00000474564 C14orf37Q86TY3 774 aa14.33□□□□□ -0.12
COL12A1-206ENST00000474564 SBNO2Q9Y2G9 1366 aa14.32□□□□□ -0.12
COL12A1-206ENST00000474564 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
COL12A1-206ENST00000474564 TECPR2O15040 1411 aa14.31□□□□□ -0.12
COL12A1-206ENST00000474564 SRPK2P78362 688 aaKnown RBP14.3□□□□□ -0.12
COL12A1-206ENST00000474564 WAPLQ7Z5K2 1190 aa14.3□□□□□ -0.12
COL12A1-206ENST00000474564 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
COL12A1-206ENST00000474564 TESK2Q96S53 571 aa14.3□□□□□ -0.12
COL12A1-206ENST00000474564 MINK1Q8N4C8 1332 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-206ENST00000474564 ASXL1Q8IXJ9 1541 aa14.29□□□□□ -0.12
COL12A1-206ENST00000474564 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
COL12A1-206ENST00000474564 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
COL12A1-206ENST00000474564 SETD1AO15047 1707 aaKnown RBP14.27□□□□□ -0.12
COL12A1-206ENST00000474564 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
COL12A1-206ENST00000474564 CPS1P31327 1500 aa14.26□□□□□ -0.13
COL12A1-206ENST00000474564 PTPRUQ92729 1446 aa14.26□□□□□ -0.13
COL12A1-206ENST00000474564 ROBO2Q9HCK4 1378 aa14.26□□□□□ -0.13
COL12A1-206ENST00000474564 KIF7Q2M1P5 1343 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms