RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TMEM131LA2VDJ0 1609 aa27.82■■■□□ 2.04
CCDC171-206ENST00000474193 PIP4K2BP78356 416 aa27.82■■■□□ 2.04
CCDC171-206ENST00000474193 KCNA6P17658 529 aa27.81■■■□□ 2.04
CCDC171-206ENST00000474193 SLC4A1APQ9BWU0 796 aaKnown RBP27.81■■■□□ 2.04
CCDC171-206ENST00000474193 MYO5BQ9ULV0 1848 aa27.79■■■□□ 2.04
CCDC171-206ENST00000474193 PLEKHG1Q9ULL1 1385 aa27.79■■■□□ 2.04
CCDC171-206ENST00000474193 ACIN1Q9UKV3 1341 aaKnown RBP27.79■■■□□ 2.04
CCDC171-206ENST00000474193 ZNF326Q5BKZ1 582 aaKnown RBP27.79■■■□□ 2.04
CCDC171-206ENST00000474193 LRRC7Q96NW7 1537 aa27.78■■■□□ 2.04
CCDC171-206ENST00000474193 ZFYVE9O95405 1425 aa27.78■■■□□ 2.04
CCDC171-206ENST00000474193 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
CCDC171-206ENST00000474193 SPHKAPQ2M3C7 1700 aa27.76■■■□□ 2.03
CCDC171-206ENST00000474193 PROSER2Q86WR7 435 aaPredicted RBP27.76■■■□□ 2.03
CCDC171-206ENST00000474193 NUTM2DQ5VT03 806 aaPredicted RBP27.75■■■□□ 2.03
CCDC171-206ENST00000474193 STRCP1A6NGW2 1772 aa27.75■■■□□ 2.03
CCDC171-206ENST00000474193 TBX22Q9Y458 520 aa27.74■■■□□ 2.03
CCDC171-206ENST00000474193 TMEM94Q12767 1356 aa27.65■■■□□ 2.02
CCDC171-206ENST00000474193 TRPM2O94759 1503 aa27.65■■■□□ 2.02
CCDC171-206ENST00000474193 NKTRP30414 1462 aaKnown RBP27.63■■■□□ 2.01
CCDC171-206ENST00000474193 HSPA1LP34931 641 aa27.62■■■□□ 2.01
CCDC171-206ENST00000474193 MPHOSPH9Q99550 1183 aa27.62■■■□□ 2.01
CCDC171-206ENST00000474193 KIF1BO60333 1816 aa27.62■■■□□ 2.01
CCDC171-206ENST00000474193 PIK3R4Q99570 1358 aa27.61■■■□□ 2.01
CCDC171-206ENST00000474193 SETD5Q9C0A6 1442 aa27.6■■■□□ 2.01
CCDC171-206ENST00000474193 DIP2AQ14689 1571 aa27.6■■■□□ 2.01
CCDC171-206ENST00000474193 CLTCL1P53675 1640 aa27.59■■■□□ 2.01
CCDC171-206ENST00000474193 VGFO15240 615 aaPredicted RBP27.59■■■□□ 2.01
CCDC171-206ENST00000474193 C14orf37Q86TY3 774 aa27.59■■■□□ 2.01
CCDC171-206ENST00000474193 DISP3Q9P2K9 1392 aa27.59■■■□□ 2.01
CCDC171-206ENST00000474193 RBM33Q96EV2 1170 aaKnown RBP27.58■■■□□ 2.01
CCDC171-206ENST00000474193 MSH6P52701 1360 aa27.58■■■□□ 2.01
CCDC171-206ENST00000474193 ADAMTS13Q76LX8 1427 aa27.58■■■□□ 2
CCDC171-206ENST00000474193 CHD2O14647 1828 aaKnown RBP27.57■■■□□ 2
CCDC171-206ENST00000474193 NWD1Q149M9 1564 aa27.57■■■□□ 2
CCDC171-206ENST00000474193 RPGRIP1LQ68CZ1 1315 aa27.57■■■□□ 2
CCDC171-206ENST00000474193 FOXD1Q16676 465 aa27.55■■■□□ 2
CCDC171-206ENST00000474193 AMOTL2Q9Y2J4 779 aa27.55■■■□□ 2
CCDC171-206ENST00000474193 XIRP1Q702N8 1843 aaKnown RBP27.54■■■□□ 2
CCDC171-206ENST00000474193 CCDC144AA2RUR9 1427 aa27.52■■■□□ 2
CCDC171-206ENST00000474193 NCOA3Q9Y6Q9 1424 aa27.51■■□□□ 1.99
CCDC171-206ENST00000474193 ALKQ9UM73 1620 aa27.5■■□□□ 1.99
CCDC171-206ENST00000474193 SETBP1Q9Y6X0 1596 aa27.48■■□□□ 1.99
CCDC171-206ENST00000474193 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
CCDC171-206ENST00000474193 C19orf44Q9H6X5 657 aa27.47■■□□□ 1.99
CCDC171-206ENST00000474193 FAM135BQ49AJ0 1406 aa27.47■■□□□ 1.99
CCDC171-206ENST00000474193 ATF3P18847 181 aa27.46■■□□□ 1.99
CCDC171-206ENST00000474193 SLAIN2Q9P270 581 aa27.46■■□□□ 1.99
CCDC171-206ENST00000474193 RAB3GAP2Q9H2M9 1393 aa27.46■■□□□ 1.99
CCDC171-206ENST00000474193 TRIM26Q12899 539 aaPredicted RBP27.45■■□□□ 1.98
CCDC171-206ENST00000474193 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
CCDC171-206ENST00000474193 CADPS2Q86UW7 1296 aa27.44■■□□□ 1.98
CCDC171-206ENST00000474193 METP08581 1390 aa27.4■■□□□ 1.98
CCDC171-206ENST00000474193 PTPRUQ92729 1446 aa27.4■■□□□ 1.98
CCDC171-206ENST00000474193 NRXN3Q9Y4C0 1643 aa27.39■■□□□ 1.98
CCDC171-206ENST00000474193 HRCP23327 699 aa27.39■■□□□ 1.98
CCDC171-206ENST00000474193 ANKRD30BQ9BXX2 1392 aa27.36■■□□□ 1.97
CCDC171-206ENST00000474193 ROBO1Q9Y6N7 1651 aa27.33■■□□□ 1.97
CCDC171-206ENST00000474193 PPLO60437 1756 aa27.32■■□□□ 1.96
CCDC171-206ENST00000474193 PHF23Q9BUL5 403 aaPredicted RBP27.32■■□□□ 1.96
CCDC171-206ENST00000474193 XRN1Q8IZH2 1706 aaKnown RBP27.3■■□□□ 1.96
CCDC171-206ENST00000474193 SPATA31E1Q6ZUB1 1445 aa27.3■■□□□ 1.96
CCDC171-206ENST00000474193 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.3■■□□□ 1.96
CCDC171-206ENST00000474193 ADGRF5Q8IZF2 1346 aa27.28■■□□□ 1.96
CCDC171-206ENST00000474193 DCCP43146 1447 aa27.27■■□□□ 1.96
CCDC171-206ENST00000474193 MED1Q15648 1581 aaPredicted RBP27.25■■□□□ 1.95
CCDC171-206ENST00000474193 ILDR2Q71H61 639 aa27.23■■□□□ 1.95
CCDC171-206ENST00000474193 PTCH1Q13635 1447 aa27.21■■□□□ 1.95
CCDC171-206ENST00000474193 ADGRL3Q9HAR2 1447 aa27.21■■□□□ 1.95
CCDC171-206ENST00000474193 PHLPP1O60346 1717 aa27.19■■□□□ 1.94
CCDC171-206ENST00000474193 STK26Q9P289 416 aa27.19■■□□□ 1.94
CCDC171-206ENST00000474193 SETD1AO15047 1707 aaKnown RBP27.17■■□□□ 1.94
CCDC171-206ENST00000474193 BRINP3Q76B58 766 aa27.17■■□□□ 1.94
CCDC171-206ENST00000474193 ROBO2Q9HCK4 1378 aa27.17■■□□□ 1.94
CCDC171-206ENST00000474193 JCADQ9P266 1359 aa27.17■■□□□ 1.94
CCDC171-206ENST00000474193 STAC3Q96MF2 364 aa27.16■■□□□ 1.94
CCDC171-206ENST00000474193 IFT172Q9UG01 1749 aa27.16■■□□□ 1.94
CCDC171-206ENST00000474193 TMEM132EQ6IEE7 984 aa27.15■■□□□ 1.94
CCDC171-206ENST00000474193 C14orf93Q9H972 538 aaKnown RBP27.14■■□□□ 1.94
CCDC171-206ENST00000474193 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
CCDC171-206ENST00000474193 MST1RQ04912 1400 aa27.13■■□□□ 1.93
CCDC171-206ENST00000474193 PRAG1Q86YV5 1406 aa27.13■■□□□ 1.93
CCDC171-206ENST00000474193 LRPPRCP42704 1394 aaKnown RBP27.12■■□□□ 1.93
CCDC171-206ENST00000474193 PCGF6Q9BYE7 350 aa27.12■■□□□ 1.93
CCDC171-206ENST00000474193 DHX57Q6P158 1386 aaKnown RBP27.11■■□□□ 1.93
CCDC171-206ENST00000474193 ABCC11Q96J66 1382 aa27.11■■□□□ 1.93
CCDC171-206ENST00000474193 DCAF11Q8TEB1 546 aa27.1■■□□□ 1.93
CCDC171-206ENST00000474193 KDM2AQ9Y2K7 1162 aa27.1■■□□□ 1.93
CCDC171-206ENST00000474193 MYOM2P54296 1465 aa27.09■■□□□ 1.93
CCDC171-206ENST00000474193 SOCS7O14512 581 aa27.09■■□□□ 1.93
CCDC171-206ENST00000474193 CFAP70Q5T0N1 1121 aa27.09■■□□□ 1.93
CCDC171-206ENST00000474193 NALCNQ8IZF0 1738 aa27.09■■□□□ 1.93
CCDC171-206ENST00000474193 LRRC59Q96AG4 307 aaKnown RBP27.08■■□□□ 1.93
CCDC171-206ENST00000474193 AHDC1Q5TGY3 1603 aaPredicted RBP27.08■■□□□ 1.93
CCDC171-206ENST00000474193 WAPLQ7Z5K2 1190 aa27.07■■□□□ 1.92
CCDC171-206ENST00000474193 SIRT1Q96EB6 747 aa27.07■■□□□ 1.92
CCDC171-206ENST00000474193 SPATA31A6Q5VVP1 1343 aa27.07■■□□□ 1.92
CCDC171-206ENST00000474193 YTHDC2Q9H6S0 1430 aaKnown RBP27.06■■□□□ 1.92
CCDC171-206ENST00000474193 ASXL1Q8IXJ9 1541 aa27.06■■□□□ 1.92
CCDC171-206ENST00000474193 TECPR2O15040 1411 aa27.05■■□□□ 1.92
CCDC171-206ENST00000474193 MEX3CQ5U5Q3 659 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms