RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 VGFO15240 615 aaPredicted RBP14.52□□□□□ -0.09
PRPF38A-202ENST00000474048 ROCK2O75116 1388 aaKnown RBP14.51□□□□□ -0.09
PRPF38A-202ENST00000474048 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
PRPF38A-202ENST00000474048 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRPF38A-202ENST00000474048 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
PRPF38A-202ENST00000474048 UBR1Q8IWV7 1749 aa14.49□□□□□ -0.09
PRPF38A-202ENST00000474048 NEXMIFQ5QGS0 1516 aa14.49□□□□□ -0.09
PRPF38A-202ENST00000474048 PTPRMP28827 1452 aa14.49□□□□□ -0.09
PRPF38A-202ENST00000474048 LAMC1P11047 1609 aa14.48□□□□□ -0.09
PRPF38A-202ENST00000474048 EIF4G2P78344 907 aaKnown RBP eCLIP14.48□□□□□ -0.09
PRPF38A-202ENST00000474048 CARD11Q9BXL7 1154 aa14.48□□□□□ -0.09
PRPF38A-202ENST00000474048 KIAA1210Q9ULL0 1709 aa14.48□□□□□ -0.09
PRPF38A-202ENST00000474048 A2ML1A8K2U0 1454 aa14.48□□□□□ -0.09
PRPF38A-202ENST00000474048 CEP170BQ9Y4F5 1589 aaPredicted RBP14.47□□□□□ -0.09
PRPF38A-202ENST00000474048 ZNF316A6NFI3 1004 aaPredicted RBP14.47□□□□□ -0.09
PRPF38A-202ENST00000474048 NBPF8Q3BBV2 869 aa14.47□□□□□ -0.09
PRPF38A-202ENST00000474048 BCANQ96GW7 911 aa14.47□□□□□ -0.09
PRPF38A-202ENST00000474048 EID1Q9Y6B2 187 aa14.47□□□□□ -0.09
PRPF38A-202ENST00000474048 RIMS2Q9UQ26 1411 aa14.47□□□□□ -0.09
PRPF38A-202ENST00000474048 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
PRPF38A-202ENST00000474048 ZNF142P52746 1687 aaPredicted RBP14.46□□□□□ -0.09
PRPF38A-202ENST00000474048 THEMISQ8N1K5 641 aaPredicted RBP14.46□□□□□ -0.09
PRPF38A-202ENST00000474048 EIF3AQ14152 1382 aaKnown RBP14.44□□□□□ -0.1
PRPF38A-202ENST00000474048 ZFYVE9O95405 1425 aa14.43□□□□□ -0.1
PRPF38A-202ENST00000474048 NUTM2DQ5VT03 806 aaPredicted RBP14.43□□□□□ -0.1
PRPF38A-202ENST00000474048 ADGRF5Q8IZF2 1346 aa14.42□□□□□ -0.1
PRPF38A-202ENST00000474048 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
PRPF38A-202ENST00000474048 USP47Q96K76 1375 aa14.42□□□□□ -0.1
PRPF38A-202ENST00000474048 TMEM2Q9UHN6 1383 aa14.42□□□□□ -0.1
PRPF38A-202ENST00000474048 NRXN1Q9ULB1 1477 aa14.42□□□□□ -0.1
PRPF38A-202ENST00000474048 SETBP1Q9Y6X0 1596 aa14.4□□□□□ -0.1
PRPF38A-202ENST00000474048 HSPA5P11021 654 aaKnown RBP14.39□□□□□ -0.11
PRPF38A-202ENST00000474048 GPRASP1Q5JY77 1395 aa14.38□□□□□ -0.11
PRPF38A-202ENST00000474048 SLIT1O75093 1534 aa14.38□□□□□ -0.11
PRPF38A-202ENST00000474048 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
PRPF38A-202ENST00000474048 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
PRPF38A-202ENST00000474048 SCAF11Q99590 1463 aaKnown RBP14.37□□□□□ -0.11
PRPF38A-202ENST00000474048 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
PRPF38A-202ENST00000474048 C14orf93Q9H972 538 aaKnown RBP14.36□□□□□ -0.11
PRPF38A-202ENST00000474048 NBPF1Q3BBV0 1214 aa14.35□□□□□ -0.11
PRPF38A-202ENST00000474048 ANKLE2Q86XL3 938 aa14.35□□□□□ -0.11
PRPF38A-202ENST00000474048 ARHGAP23Q9P227 1491 aa14.35□□□□□ -0.11
PRPF38A-202ENST00000474048 POLR1AO95602 1720 aaPredicted RBP14.35□□□□□ -0.11
PRPF38A-202ENST00000474048 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
PRPF38A-202ENST00000474048 ALKQ9UM73 1620 aa14.34□□□□□ -0.11
PRPF38A-202ENST00000474048 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
PRPF38A-202ENST00000474048 HIRIP3Q9BW71 556 aaPredicted RBP14.34□□□□□ -0.11
PRPF38A-202ENST00000474048 DIP2AQ14689 1571 aa14.33□□□□□ -0.12
PRPF38A-202ENST00000474048 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
PRPF38A-202ENST00000474048 ST20-MTHFSA0A0A6YYL1 179 aa14.3□□□□□ -0.12
PRPF38A-202ENST00000474048 POLR3GLQ9BT43 218 aa14.3□□□□□ -0.12
PRPF38A-202ENST00000474048 TRAK1Q9UPV9 953 aa14.3□□□□□ -0.12
PRPF38A-202ENST00000474048 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
PRPF38A-202ENST00000474048 TMEM132EQ6IEE7 984 aa14.29□□□□□ -0.12
PRPF38A-202ENST00000474048 STK26Q9P289 416 aa14.29□□□□□ -0.12
PRPF38A-202ENST00000474048 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
PRPF38A-202ENST00000474048 LTKP29376 864 aa14.28□□□□□ -0.12
PRPF38A-202ENST00000474048 TMF1P82094 1093 aa14.28□□□□□ -0.12
PRPF38A-202ENST00000474048 CDCA8Q53HL2 280 aa14.28□□□□□ -0.12
PRPF38A-202ENST00000474048 QRICH2Q9H0J4 1663 aa14.28□□□□□ -0.12
PRPF38A-202ENST00000474048 YTHDC2Q9H6S0 1430 aaKnown RBP14.28□□□□□ -0.12
PRPF38A-202ENST00000474048 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
PRPF38A-202ENST00000474048 POGKQ9P215 609 aa14.28□□□□□ -0.12
PRPF38A-202ENST00000474048 SETD1AO15047 1707 aaKnown RBP14.27□□□□□ -0.12
PRPF38A-202ENST00000474048 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.12
PRPF38A-202ENST00000474048 KNDC1Q76NI1 1749 aa14.26□□□□□ -0.13
PRPF38A-202ENST00000474048 NPHP4O75161 1426 aaPredicted RBP14.25□□□□□ -0.13
PRPF38A-202ENST00000474048 LRPPRCP42704 1394 aaKnown RBP14.25□□□□□ -0.13
PRPF38A-202ENST00000474048 SLC26A8Q96RN1 970 aa14.25□□□□□ -0.13
PRPF38A-202ENST00000474048 ASXL1Q8IXJ9 1541 aa14.25□□□□□ -0.13
PRPF38A-202ENST00000474048 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
PRPF38A-202ENST00000474048 TBX22Q9Y458 520 aa14.24□□□□□ -0.13
PRPF38A-202ENST00000474048 DLC1Q96QB1 1528 aa14.23□□□□□ -0.13
PRPF38A-202ENST00000474048 ADAMTS13Q76LX8 1427 aa14.23□□□□□ -0.13
PRPF38A-202ENST00000474048 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
PRPF38A-202ENST00000474048 METP08581 1390 aa14.22□□□□□ -0.13
PRPF38A-202ENST00000474048 PIK3R4Q99570 1358 aa14.22□□□□□ -0.13
PRPF38A-202ENST00000474048 CPS1P31327 1500 aa14.21□□□□□ -0.13
PRPF38A-202ENST00000474048 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
PRPF38A-202ENST00000474048 ABCC11Q96J66 1382 aa14.21□□□□□ -0.14
PRPF38A-202ENST00000474048 SBNO2Q9Y2G9 1366 aa14.21□□□□□ -0.14
PRPF38A-202ENST00000474048 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
PRPF38A-202ENST00000474048 MED14O60244 1454 aa14.2□□□□□ -0.14
PRPF38A-202ENST00000474048 DDX10Q13206 875 aaKnown RBP14.2□□□□□ -0.14
PRPF38A-202ENST00000474048 SAFB2Q14151 953 aaKnown RBP eCLIP14.2□□□□□ -0.14
PRPF38A-202ENST00000474048 PRAM1Q96QH2 718 aa14.2□□□□□ -0.14
PRPF38A-202ENST00000474048 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
PRPF38A-202ENST00000474048 WASHC2AQ641Q2 1341 aa14.19□□□□□ -0.14
PRPF38A-202ENST00000474048 EVC2Q86UK5 1308 aa14.19□□□□□ -0.14
PRPF38A-202ENST00000474048 HSPA2P54652 639 aa14.19□□□□□ -0.14
PRPF38A-202ENST00000474048 FAM135BQ49AJ0 1406 aa14.18□□□□□ -0.14
PRPF38A-202ENST00000474048 TECPR2O15040 1411 aa14.17□□□□□ -0.14
PRPF38A-202ENST00000474048 TESK2Q96S53 571 aa14.17□□□□□ -0.14
PRPF38A-202ENST00000474048 AMOTL2Q9Y2J4 779 aa14.17□□□□□ -0.14
PRPF38A-202ENST00000474048 MINK1Q8N4C8 1332 aaPredicted RBP14.16□□□□□ -0.14
PRPF38A-202ENST00000474048 PTCH1Q13635 1447 aa14.16□□□□□ -0.14
PRPF38A-202ENST00000474048 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
PRPF38A-202ENST00000474048 DISP3Q9P2K9 1392 aa14.16□□□□□ -0.14
PRPF38A-202ENST00000474048 XRN1Q8IZH2 1706 aaKnown RBP14.15□□□□□ -0.14
PRPF38A-202ENST00000474048 CHD2O14647 1828 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms