RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 ADGRB3O60242 1522 aa23.69■■□□□ 1.38
CLIC3-201ENST00000473911 UNC13BO14795 1591 aa23.68■■□□□ 1.38
CLIC3-201ENST00000473911 MYO5BQ9ULV0 1848 aa23.68■■□□□ 1.38
CLIC3-201ENST00000473911 NUP155O75694 1391 aa23.66■■□□□ 1.38
CLIC3-201ENST00000473911 RRBP1Q9P2E9 1410 aaKnown RBP23.66■■□□□ 1.38
CLIC3-201ENST00000473911 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
CLIC3-201ENST00000473911 FAM135BQ49AJ0 1406 aa23.65■■□□□ 1.38
CLIC3-201ENST00000473911 ROBO1Q9Y6N7 1651 aa23.62■■□□□ 1.37
CLIC3-201ENST00000473911 ZFYVE9O95405 1425 aa23.61■■□□□ 1.37
CLIC3-201ENST00000473911 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
CLIC3-201ENST00000473911 GCC2Q8IWJ2 1684 aa23.6■■□□□ 1.37
CLIC3-201ENST00000473911 CHGAP10645 457 aaKnown RBP23.59■■□□□ 1.37
CLIC3-201ENST00000473911 BCANQ96GW7 911 aa23.59■■□□□ 1.37
CLIC3-201ENST00000473911 IQGAP3Q86VI3 1631 aa23.59■■□□□ 1.37
CLIC3-201ENST00000473911 TMEM131LA2VDJ0 1609 aa23.58■■□□□ 1.36
CLIC3-201ENST00000473911 RIMS2Q9UQ26 1411 aa23.57■■□□□ 1.36
CLIC3-201ENST00000473911 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
CLIC3-201ENST00000473911 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
CLIC3-201ENST00000473911 CHD2O14647 1828 aaKnown RBP23.55■■□□□ 1.36
CLIC3-201ENST00000473911 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
CLIC3-201ENST00000473911 NUTM2DQ5VT03 806 aaPredicted RBP23.55■■□□□ 1.36
CLIC3-201ENST00000473911 E9PCH4 1651 aa23.54■■□□□ 1.36
CLIC3-201ENST00000473911 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
CLIC3-201ENST00000473911 POTEAQ6S8J7 498 aa23.54■■□□□ 1.36
CLIC3-201ENST00000473911 NAIPQ13075 1403 aa23.5■■□□□ 1.35
CLIC3-201ENST00000473911 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.5■■□□□ 1.35
CLIC3-201ENST00000473911 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
CLIC3-201ENST00000473911 MSH6P52701 1360 aa23.49■■□□□ 1.35
CLIC3-201ENST00000473911 ADAMTS13Q76LX8 1427 aa23.48■■□□□ 1.35
CLIC3-201ENST00000473911 PHLPP1O60346 1717 aa23.47■■□□□ 1.35
CLIC3-201ENST00000473911 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
CLIC3-201ENST00000473911 TBX22Q9Y458 520 aa23.46■■□□□ 1.35
CLIC3-201ENST00000473911 HFM1A2PYH4 1435 aa23.44■■□□□ 1.34
CLIC3-201ENST00000473911 PTPRUQ92729 1446 aa23.4■■□□□ 1.34
CLIC3-201ENST00000473911 COL16A1Q07092 1604 aaPredicted RBP23.4■■□□□ 1.34
CLIC3-201ENST00000473911 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.39■■□□□ 1.34
CLIC3-201ENST00000473911 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
CLIC3-201ENST00000473911 JCADQ9P266 1359 aa23.37■■□□□ 1.33
CLIC3-201ENST00000473911 SPHKAPQ2M3C7 1700 aa23.36■■□□□ 1.33
CLIC3-201ENST00000473911 C14orf37Q86TY3 774 aa23.36■■□□□ 1.33
CLIC3-201ENST00000473911 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
CLIC3-201ENST00000473911 LRP6O75581 1613 aa23.36■■□□□ 1.33
CLIC3-201ENST00000473911 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
CLIC3-201ENST00000473911 NCOA3Q9Y6Q9 1424 aa23.35■■□□□ 1.33
CLIC3-201ENST00000473911 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
CLIC3-201ENST00000473911 AMOTL2Q9Y2J4 779 aa23.34■■□□□ 1.33
CLIC3-201ENST00000473911 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.33
CLIC3-201ENST00000473911 TRPM2O94759 1503 aa23.33■■□□□ 1.32
CLIC3-201ENST00000473911 C19orf44Q9H6X5 657 aa23.32■■□□□ 1.32
CLIC3-201ENST00000473911 PIK3R4Q99570 1358 aa23.31■■□□□ 1.32
CLIC3-201ENST00000473911 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
CLIC3-201ENST00000473911 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
CLIC3-201ENST00000473911 AHDC1Q5TGY3 1603 aaPredicted RBP23.29■■□□□ 1.32
CLIC3-201ENST00000473911 ATF3P18847 181 aa23.28■■□□□ 1.32
CLIC3-201ENST00000473911 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
CLIC3-201ENST00000473911 XRN1Q8IZH2 1706 aaKnown RBP23.27■■□□□ 1.32
CLIC3-201ENST00000473911 METP08581 1390 aa23.27■■□□□ 1.31
CLIC3-201ENST00000473911 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
CLIC3-201ENST00000473911 SHPRHQ149N8 1683 aa23.24■■□□□ 1.31
CLIC3-201ENST00000473911 FOXD1Q16676 465 aa23.23■■□□□ 1.31
CLIC3-201ENST00000473911 SPATA31A6Q5VVP1 1343 aa23.23■■□□□ 1.31
CLIC3-201ENST00000473911 NEXMIFQ5QGS0 1516 aa23.2■■□□□ 1.3
CLIC3-201ENST00000473911 MST1RQ04912 1400 aa23.2■■□□□ 1.3
CLIC3-201ENST00000473911 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
CLIC3-201ENST00000473911 DDX17Q92841 729 aaKnown RBP23.2■■□□□ 1.3
CLIC3-201ENST00000473911 MPHOSPH9Q99550 1183 aa23.19■■□□□ 1.3
CLIC3-201ENST00000473911 ASXL1Q8IXJ9 1541 aa23.18■■□□□ 1.3
CLIC3-201ENST00000473911 NUTM2BA6NNL0 878 aaPredicted RBP23.18■■□□□ 1.3
CLIC3-201ENST00000473911 NUTM2EB1AL46 878 aaPredicted RBP23.18■■□□□ 1.3
CLIC3-201ENST00000473911 VGFO15240 615 aaPredicted RBP23.18■■□□□ 1.3
CLIC3-201ENST00000473911 NUTM2AQ8IVF1 878 aaPredicted RBP23.18■■□□□ 1.3
CLIC3-201ENST00000473911 KIF1BO60333 1816 aa23.17■■□□□ 1.3
CLIC3-201ENST00000473911 DCCP43146 1447 aa23.16■■□□□ 1.3
CLIC3-201ENST00000473911 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
CLIC3-201ENST00000473911 ACIN1Q9UKV3 1341 aaKnown RBP23.15■■□□□ 1.3
CLIC3-201ENST00000473911 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
CLIC3-201ENST00000473911 SETD5Q9C0A6 1442 aa23.15■■□□□ 1.3
CLIC3-201ENST00000473911 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
CLIC3-201ENST00000473911 NALCNQ8IZF0 1738 aa23.13■■□□□ 1.29
CLIC3-201ENST00000473911 ZNF772Q68DY9 489 aaPredicted RBP23.13■■□□□ 1.29
CLIC3-201ENST00000473911 ADGRL3Q9HAR2 1447 aa23.11■■□□□ 1.29
CLIC3-201ENST00000473911 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.29
CLIC3-201ENST00000473911 RGL3Q3MIN7 710 aa23.09■■□□□ 1.29
CLIC3-201ENST00000473911 AFF2P51816 1311 aa23.08■■□□□ 1.29
CLIC3-201ENST00000473911 PNPLA6Q8IY17 1366 aa23.06■■□□□ 1.28
CLIC3-201ENST00000473911 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
CLIC3-201ENST00000473911 RXRBP28702 533 aa23.06■■□□□ 1.28
CLIC3-201ENST00000473911 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
CLIC3-201ENST00000473911 LRRC59Q96AG4 307 aaKnown RBP23.05■■□□□ 1.28
CLIC3-201ENST00000473911 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
CLIC3-201ENST00000473911 C8orf37Q96NL8 207 aa23.03■■□□□ 1.28
CLIC3-201ENST00000473911 ORAI2Q96SN7 254 aa23.03■■□□□ 1.28
CLIC3-201ENST00000473911 SPATA31E1Q6ZUB1 1445 aa23.02■■□□□ 1.28
CLIC3-201ENST00000473911 ADGRF5Q8IZF2 1346 aa23.01■■□□□ 1.27
CLIC3-201ENST00000473911 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
CLIC3-201ENST00000473911 PPLO60437 1756 aa23■■□□□ 1.27
CLIC3-201ENST00000473911 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
CLIC3-201ENST00000473911 QTRT2Q9H974 415 aaKnown RBP22.98■■□□□ 1.27
CLIC3-201ENST00000473911 ADAMTS2O95450 1211 aa22.97■■□□□ 1.27
CLIC3-201ENST00000473911 CDK12Q9NYV4 1490 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms