RNA–Protein interactions for RNA: ENST00000473458.5

SGSM1-204, Transcript of small G protein signaling modulator 1, humanhuman

TSL 5

Gene SGSM1, Length 5,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM1-204ENST00000473458 NPHP1O15259 732 aa15.19■□□□□ 0.02
SGSM1-204ENST00000473458 TRAK1Q9UPV9 953 aa15.19■□□□□ 0.02
SGSM1-204ENST00000473458 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
SGSM1-204ENST00000473458 AEBP2Q6ZN18 517 aaPredicted RBP15.19■□□□□ 0.02
SGSM1-204ENST00000473458 CFAP43Q8NDM7 1665 aa15.19■□□□□ 0.02
SGSM1-204ENST00000473458 CHAF1AQ13111 956 aaPredicted RBP15.19■□□□□ 0.02
SGSM1-204ENST00000473458 FANCAO15360 1455 aa15.18■□□□□ 0.02
SGSM1-204ENST00000473458 WDR7Q9Y4E6 1490 aa15.18■□□□□ 0.02
SGSM1-204ENST00000473458 SHANK2Q9UPX8 1470 aa15.18■□□□□ 0.02
SGSM1-204ENST00000473458 SLKQ9H2G2 1235 aaPredicted RBP15.18■□□□□ 0.02
SGSM1-204ENST00000473458 DUOX2Q9NRD8 1548 aa15.18■□□□□ 0.02
SGSM1-204ENST00000473458 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
SGSM1-204ENST00000473458 MCCP23508 829 aa15.18■□□□□ 0.02
SGSM1-204ENST00000473458 PSME1Q06323 249 aa15.18■□□□□ 0.02
SGSM1-204ENST00000473458 CFAP74Q9C0B2 1584 aa15.18■□□□□ 0.02
SGSM1-204ENST00000473458 OS9Q13438 667 aaPredicted RBP15.18■□□□□ 0.02
SGSM1-204ENST00000473458 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
SGSM1-204ENST00000473458 AAMPQ13685 434 aa15.17■□□□□ 0.02
SGSM1-204ENST00000473458 PLCH2O75038 1416 aa15.17■□□□□ 0.02
SGSM1-204ENST00000473458 TPM2P07951 284 aa15.17■□□□□ 0.02
SGSM1-204ENST00000473458 HMMRO75330 724 aa15.17■□□□□ 0.02
SGSM1-204ENST00000473458 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
SGSM1-204ENST00000473458 GPRASP1Q5JY77 1395 aa15.16■□□□□ 0.02
SGSM1-204ENST00000473458 ATF3P18847 181 aa15.16■□□□□ 0.02
SGSM1-204ENST00000473458 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
SGSM1-204ENST00000473458 ST20-MTHFSA0A0A6YYL1 179 aa15.16■□□□□ 0.02
SGSM1-204ENST00000473458 FAM135AQ9P2D6 1515 aa15.16■□□□□ 0.02
SGSM1-204ENST00000473458 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
SGSM1-204ENST00000473458 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
SGSM1-204ENST00000473458 ABCC2Q92887 1545 aa15.15■□□□□ 0.02
SGSM1-204ENST00000473458 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
SGSM1-204ENST00000473458 ZBED9Q6R2W3 1325 aa15.15■□□□□ 0.02
SGSM1-204ENST00000473458 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
SGSM1-204ENST00000473458 ZNF518AQ6AHZ1 1483 aa15.15■□□□□ 0.02
SGSM1-204ENST00000473458 ATAD2Q6PL18 1390 aa15.14■□□□□ 0.01
SGSM1-204ENST00000473458 RWDD1Q9H446 243 aaPredicted RBP15.14■□□□□ 0.01
SGSM1-204ENST00000473458 GBP4Q96PP9 640 aa15.14■□□□□ 0.01
SGSM1-204ENST00000473458 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
SGSM1-204ENST00000473458 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
SGSM1-204ENST00000473458 ABCC5O15440 1437 aa15.13■□□□□ 0.01
SGSM1-204ENST00000473458 MTERF4Q7Z6M4 381 aaKnown RBP15.13■□□□□ 0.01
SGSM1-204ENST00000473458 SENP3-EIF4A1A0A087X0R7 540 aa15.13■□□□□ 0.01
SGSM1-204ENST00000473458 GPATCH3Q96I76 525 aa15.13■□□□□ 0.01
SGSM1-204ENST00000473458 NAIPQ13075 1403 aa15.12■□□□□ 0.01
SGSM1-204ENST00000473458 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
SGSM1-204ENST00000473458 CCDC7Q96M83 1385 aa15.12■□□□□ 0.01
SGSM1-204ENST00000473458 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
SGSM1-204ENST00000473458 RTEL1-TNFRSF6BF6WH68 1400 aa15.12■□□□□ 0.01
SGSM1-204ENST00000473458 ANKLE2Q86XL3 938 aa15.12■□□□□ 0.01
SGSM1-204ENST00000473458 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
SGSM1-204ENST00000473458 PANK3Q9H999 370 aa15.12■□□□□ 0.01
SGSM1-204ENST00000473458 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
SGSM1-204ENST00000473458 HSP90AB1P08238 724 aaKnown RBP15.11■□□□□ 0.01
SGSM1-204ENST00000473458 E9PSI1 815 aa15.11■□□□□ 0.01
SGSM1-204ENST00000473458 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
SGSM1-204ENST00000473458 ABCC10Q5T3U5 1492 aa15.1■□□□□ 0.01
SGSM1-204ENST00000473458 SLC4A3P48751 1232 aa15.1■□□□□ 0.01
SGSM1-204ENST00000473458 BRD4O60885 1362 aaPredicted RBP15.1■□□□□ 0.01
SGSM1-204ENST00000473458 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.1■□□□□ 0.01
SGSM1-204ENST00000473458 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
SGSM1-204ENST00000473458 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
SGSM1-204ENST00000473458 FAM13BQ9NYF5 915 aa15.09■□□□□ 0.01
SGSM1-204ENST00000473458 CHMP4CQ96CF2 233 aa15.08■□□□□ 0
SGSM1-204ENST00000473458 ASXL2Q76L83 1435 aa15.08■□□□□ 0
SGSM1-204ENST00000473458 DIAPH1O60610 1272 aaKnown RBP15.07■□□□□ 0
SGSM1-204ENST00000473458 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
SGSM1-204ENST00000473458 TXNDC2Q86VQ3 553 aa15.07■□□□□ 0
SGSM1-204ENST00000473458 FAM161AQ3B820 660 aa15.07■□□□□ 0
SGSM1-204ENST00000473458 ATP10BO94823 1461 aa15.07■□□□□ 0
SGSM1-204ENST00000473458 DDX11L8A8MPP1 907 aa15.07■□□□□ 0
SGSM1-204ENST00000473458 PLEKHG5O94827 1062 aa15.07■□□□□ 0
SGSM1-204ENST00000473458 KIAA2012Q0VF49 1180 aa15.07■□□□□ 0
SGSM1-204ENST00000473458 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
SGSM1-204ENST00000473458 NCOA1Q15788 1441 aa15.06■□□□□ 0
SGSM1-204ENST00000473458 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
SGSM1-204ENST00000473458 C11orf95C9JLR9 678 aaPredicted RBP15.05■□□□□ -0
SGSM1-204ENST00000473458 SPRYD3Q8NCJ5 442 aa15.05■□□□□ -0
SGSM1-204ENST00000473458 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
SGSM1-204ENST00000473458 SAMD9Q5K651 1589 aa15.04■□□□□ -0
SGSM1-204ENST00000473458 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
SGSM1-204ENST00000473458 PDE4CQ08493 712 aa15.03■□□□□ -0
SGSM1-204ENST00000473458 UHRF1BP1LA0JNW5 1464 aa15.03■□□□□ -0
SGSM1-204ENST00000473458 EVA1CP58658 441 aa15.03■□□□□ -0
SGSM1-204ENST00000473458 TARBP1Q13395 1621 aaKnown RBP15.02■□□□□ -0
SGSM1-204ENST00000473458 EIF2AK4Q9P2K8 1649 aaKnown RBP15.02■□□□□ -0
SGSM1-204ENST00000473458 MRE11P49959 708 aa15.02□□□□□ -0.01
SGSM1-204ENST00000473458 HSP90B1P14625 803 aaKnown RBP15.02□□□□□ -0.01
SGSM1-204ENST00000473458 LRRFIP1Q32MZ4 808 aaKnown RBP15.02□□□□□ -0.01
SGSM1-204ENST00000473458 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
SGSM1-204ENST00000473458 SOX12O15370 315 aa15.01□□□□□ -0.01
SGSM1-204ENST00000473458 RUNDC1Q96C34 613 aa15.01□□□□□ -0.01
SGSM1-204ENST00000473458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.01□□□□□ -0.01
SGSM1-204ENST00000473458 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
SGSM1-204ENST00000473458 ZRSR1Q15695 479 aaKnown RBP15□□□□□ -0.01
SGSM1-204ENST00000473458 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
SGSM1-204ENST00000473458 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
SGSM1-204ENST00000473458 A2MP01023 1474 aa15□□□□□ -0.01
SGSM1-204ENST00000473458 CSPP1Q1MSJ5 1256 aa15□□□□□ -0.01
SGSM1-204ENST00000473458 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
SGSM1-204ENST00000473458 GNAI1P63096 354 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms