RNA–Protein interactions for RNA: ENST00000473278.1

CCDC142-206, Transcript of coiled-coil domain containing 142, humanhuman

TSL 2

Gene CCDC142, Length 810 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-206ENST00000473278 PROSER2Q86WR7 435 aaPredicted RBP18.86■□□□□ 0.61
CCDC142-206ENST00000473278 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
CCDC142-206ENST00000473278 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
CCDC142-206ENST00000473278 TMEM94Q12767 1356 aa18.85■□□□□ 0.61
CCDC142-206ENST00000473278 TBX22Q9Y458 520 aa18.85■□□□□ 0.61
CCDC142-206ENST00000473278 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
CCDC142-206ENST00000473278 CHGAP10645 457 aaKnown RBP18.84■□□□□ 0.61
CCDC142-206ENST00000473278 GCC2Q8IWJ2 1684 aa18.83■□□□□ 0.61
CCDC142-206ENST00000473278 FAM135BQ49AJ0 1406 aa18.82■□□□□ 0.6
CCDC142-206ENST00000473278 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
CCDC142-206ENST00000473278 NKTRP30414 1462 aaKnown RBP18.81■□□□□ 0.6
CCDC142-206ENST00000473278 TMEM131LA2VDJ0 1609 aa18.8■□□□□ 0.6
CCDC142-206ENST00000473278 RRBP1Q9P2E9 1410 aaKnown RBP18.8■□□□□ 0.6
CCDC142-206ENST00000473278 E9PCH4 1651 aa18.77■□□□□ 0.6
CCDC142-206ENST00000473278 MSH6P52701 1360 aa18.77■□□□□ 0.6
CCDC142-206ENST00000473278 PIK3R4Q99570 1358 aa18.77■□□□□ 0.6
CCDC142-206ENST00000473278 NCOA3Q9Y6Q9 1424 aa18.76■□□□□ 0.59
CCDC142-206ENST00000473278 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
CCDC142-206ENST00000473278 NWD1Q149M9 1564 aa18.76■□□□□ 0.59
CCDC142-206ENST00000473278 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
CCDC142-206ENST00000473278 RBM33Q96EV2 1170 aaKnown RBP18.74■□□□□ 0.59
CCDC142-206ENST00000473278 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
CCDC142-206ENST00000473278 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
CCDC142-206ENST00000473278 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
CCDC142-206ENST00000473278 NUTM2DQ5VT03 806 aaPredicted RBP18.72■□□□□ 0.59
CCDC142-206ENST00000473278 ADAMTS13Q76LX8 1427 aa18.72■□□□□ 0.59
CCDC142-206ENST00000473278 NAIPQ13075 1403 aa18.71■□□□□ 0.59
CCDC142-206ENST00000473278 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
CCDC142-206ENST00000473278 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
CCDC142-206ENST00000473278 C14orf37Q86TY3 774 aa18.69■□□□□ 0.58
CCDC142-206ENST00000473278 C19orf44Q9H6X5 657 aa18.69■□□□□ 0.58
CCDC142-206ENST00000473278 MYO5BQ9ULV0 1848 aa18.68■□□□□ 0.58
CCDC142-206ENST00000473278 CADPS2Q86UW7 1296 aa18.68■□□□□ 0.58
CCDC142-206ENST00000473278 AMOTL2Q9Y2J4 779 aa18.68■□□□□ 0.58
CCDC142-206ENST00000473278 CHD2O14647 1828 aaKnown RBP18.67■□□□□ 0.58
CCDC142-206ENST00000473278 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
CCDC142-206ENST00000473278 ATF3P18847 181 aa18.65■□□□□ 0.58
CCDC142-206ENST00000473278 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
CCDC142-206ENST00000473278 TRPM2O94759 1503 aa18.64■□□□□ 0.57
CCDC142-206ENST00000473278 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
CCDC142-206ENST00000473278 SPHKAPQ2M3C7 1700 aa18.61■□□□□ 0.57
CCDC142-206ENST00000473278 ROBO1Q9Y6N7 1651 aa18.61■□□□□ 0.57
CCDC142-206ENST00000473278 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
CCDC142-206ENST00000473278 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
CCDC142-206ENST00000473278 SETBP1Q9Y6X0 1596 aa18.59■□□□□ 0.57
CCDC142-206ENST00000473278 JCADQ9P266 1359 aa18.59■□□□□ 0.57
CCDC142-206ENST00000473278 PTPRUQ92729 1446 aa18.58■□□□□ 0.57
CCDC142-206ENST00000473278 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.57
CCDC142-206ENST00000473278 RGS17Q9UGC6 210 aaPredicted RBP18.57■□□□□ 0.56
CCDC142-206ENST00000473278 DCCP43146 1447 aa18.57■□□□□ 0.56
CCDC142-206ENST00000473278 METP08581 1390 aa18.56■□□□□ 0.56
CCDC142-206ENST00000473278 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
CCDC142-206ENST00000473278 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
CCDC142-206ENST00000473278 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.56
CCDC142-206ENST00000473278 SPATA31A6Q5VVP1 1343 aa18.52■□□□□ 0.56
CCDC142-206ENST00000473278 BRINP3Q76B58 766 aa18.52■□□□□ 0.56
CCDC142-206ENST00000473278 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.51■□□□□ 0.55
CCDC142-206ENST00000473278 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
CCDC142-206ENST00000473278 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
CCDC142-206ENST00000473278 KIF1BO60333 1816 aa18.49■□□□□ 0.55
CCDC142-206ENST00000473278 MPHOSPH9Q99550 1183 aa18.48■□□□□ 0.55
CCDC142-206ENST00000473278 ADGRL3Q9HAR2 1447 aa18.48■□□□□ 0.55
CCDC142-206ENST00000473278 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
CCDC142-206ENST00000473278 AHDC1Q5TGY3 1603 aaPredicted RBP18.47■□□□□ 0.55
CCDC142-206ENST00000473278 COL16A1Q07092 1604 aaPredicted RBP18.46■□□□□ 0.55
CCDC142-206ENST00000473278 CCDC144AA2RUR9 1427 aa18.46■□□□□ 0.55
CCDC142-206ENST00000473278 MST1RQ04912 1400 aa18.46■□□□□ 0.55
CCDC142-206ENST00000473278 PTCH1Q13635 1447 aa18.46■□□□□ 0.55
CCDC142-206ENST00000473278 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
CCDC142-206ENST00000473278 PRAG1Q86YV5 1406 aa18.44■□□□□ 0.54
CCDC142-206ENST00000473278 FOXD1Q16676 465 aa18.44■□□□□ 0.54
CCDC142-206ENST00000473278 MEX3CQ5U5Q3 659 aaKnown RBP18.43■□□□□ 0.54
CCDC142-206ENST00000473278 ZNF772Q68DY9 489 aaPredicted RBP18.43■□□□□ 0.54
CCDC142-206ENST00000473278 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
CCDC142-206ENST00000473278 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
CCDC142-206ENST00000473278 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
CCDC142-206ENST00000473278 ROBO2Q9HCK4 1378 aa18.41■□□□□ 0.54
CCDC142-206ENST00000473278 RGL3Q3MIN7 710 aa18.4■□□□□ 0.54
CCDC142-206ENST00000473278 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.53
CCDC142-206ENST00000473278 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
CCDC142-206ENST00000473278 C1orf167Q5SNV9 1468 aa18.38■□□□□ 0.53
CCDC142-206ENST00000473278 LRP6O75581 1613 aa18.36■□□□□ 0.53
CCDC142-206ENST00000473278 SHPRHQ149N8 1683 aa18.36■□□□□ 0.53
CCDC142-206ENST00000473278 PPLO60437 1756 aa18.35■□□□□ 0.53
CCDC142-206ENST00000473278 NUTM2BA6NNL0 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC142-206ENST00000473278 NUTM2EB1AL46 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC142-206ENST00000473278 NUTM2AQ8IVF1 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC142-206ENST00000473278 ABCC11Q96J66 1382 aa18.33■□□□□ 0.53
CCDC142-206ENST00000473278 SETD1AO15047 1707 aaKnown RBP18.33■□□□□ 0.52
CCDC142-206ENST00000473278 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
CCDC142-206ENST00000473278 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
CCDC142-206ENST00000473278 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
CCDC142-206ENST00000473278 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
CCDC142-206ENST00000473278 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
CCDC142-206ENST00000473278 TECPR2O15040 1411 aa18.32■□□□□ 0.52
CCDC142-206ENST00000473278 NHSL1Q5SYE7 1610 aa18.31■□□□□ 0.52
CCDC142-206ENST00000473278 DDX17Q92841 729 aaKnown RBP18.31■□□□□ 0.52
CCDC142-206ENST00000473278 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
CCDC142-206ENST00000473278 RXRBP28702 533 aa18.3■□□□□ 0.52
CCDC142-206ENST00000473278 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms