RNA–Protein interactions for RNA: ENST00000473037.5

LYST-208, Transcript of lysosomal trafficking regulator, humanhuman

TSL 2

Gene LYST, Length 8,293 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-208ENST00000473037 CHMP3Q9Y3E7 222 aa8.74□□□□□ -1.01
LYST-208ENST00000473037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.73□□□□□ -1.01
LYST-208ENST00000473037 CYB5RLQ6IPT4 315 aa8.73□□□□□ -1.01
LYST-208ENST00000473037 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
LYST-208ENST00000473037 DIAPH1O60610 1272 aaKnown RBP8.73□□□□□ -1.01
LYST-208ENST00000473037 ISY1Q9ULR0 285 aaKnown RBP8.73□□□□□ -1.01
LYST-208ENST00000473037 KIF14Q15058 1648 aa8.73□□□□□ -1.01
LYST-208ENST00000473037 DDX11L8A8MPP1 907 aa8.73□□□□□ -1.01
LYST-208ENST00000473037 SMG6Q86US8 1419 aaKnown RBP8.73□□□□□ -1.01
LYST-208ENST00000473037 FAM69CQ0P6D2 419 aa8.73□□□□□ -1.01
LYST-208ENST00000473037 RPGRIP1LQ68CZ1 1315 aa8.73□□□□□ -1.01
LYST-208ENST00000473037 BRD4O60885 1362 aaPredicted RBP8.73□□□□□ -1.01
LYST-208ENST00000473037 GNAI1P63096 354 aa8.73□□□□□ -1.01
LYST-208ENST00000473037 CCDC7Q96M83 1385 aa8.72□□□□□ -1.01
LYST-208ENST00000473037 GPRASP1Q5JY77 1395 aa8.72□□□□□ -1.01
LYST-208ENST00000473037 ANKRD30BQ9BXX2 1392 aa8.72□□□□□ -1.01
LYST-208ENST00000473037 EVA1CP58658 441 aa8.72□□□□□ -1.01
LYST-208ENST00000473037 PSME1Q06323 249 aa8.72□□□□□ -1.01
LYST-208ENST00000473037 NOL10Q9BSC4 688 aaKnown RBP8.72□□□□□ -1.01
LYST-208ENST00000473037 ZNF330Q9Y3S2 320 aaPredicted RBP8.72□□□□□ -1.01
LYST-208ENST00000473037 NINLQ9Y2I6 1382 aa8.72□□□□□ -1.01
LYST-208ENST00000473037 SKOR2Q2VWA4 1001 aaPredicted RBP8.71□□□□□ -1.01
LYST-208ENST00000473037 ATF3P18847 181 aa8.71□□□□□ -1.01
LYST-208ENST00000473037 RUNDC1Q96C34 613 aa8.71□□□□□ -1.02
LYST-208ENST00000473037 ZKSCAN1P17029 563 aaPredicted RBP8.71□□□□□ -1.02
LYST-208ENST00000473037 RNF20Q5VTR2 975 aa8.71□□□□□ -1.02
LYST-208ENST00000473037 FRAT2O75474 233 aaPredicted RBP8.7□□□□□ -1.02
LYST-208ENST00000473037 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
LYST-208ENST00000473037 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
LYST-208ENST00000473037 CT47B1P0C2W7 299 aaPredicted RBP8.7□□□□□ -1.02
LYST-208ENST00000473037 C9orf78Q9NZ63 289 aaPredicted RBP8.7□□□□□ -1.02
LYST-208ENST00000473037 THEMISQ8N1K5 641 aaPredicted RBP8.69□□□□□ -1.02
LYST-208ENST00000473037 THOC2Q8NI27 1593 aaKnown RBP8.69□□□□□ -1.02
LYST-208ENST00000473037 SYNE3Q6ZMZ3 975 aa8.69□□□□□ -1.02
LYST-208ENST00000473037 UNC13AQ9UPW8 1703 aa8.69□□□□□ -1.02
LYST-208ENST00000473037 AKAP17AQ02040 695 aaKnown RBP8.69□□□□□ -1.02
LYST-208ENST00000473037 EPRSP07814 1512 aaKnown RBP8.69□□□□□ -1.02
LYST-208ENST00000473037 IPO9Q96P70 1041 aaKnown RBP8.68□□□□□ -1.02
LYST-208ENST00000473037 DIAPH3Q9NSV4 1193 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 ITSN2Q9NZM3 1697 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 SNAPC4Q5SXM2 1469 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 APBB1O00213 710 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 HOOK1Q9UJC3 728 aaKnown RBP8.68□□□□□ -1.02
LYST-208ENST00000473037 ERC2O15083 957 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 CLSTN1O94985 981 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 NAP1L5Q96NT1 182 aaPredicted RBP8.68□□□□□ -1.02
LYST-208ENST00000473037 ARAP1Q96P48 1450 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 KAT6BQ8WYB5 2073 aa8.68□□□□□ -1.02
LYST-208ENST00000473037 MINK1Q8N4C8 1332 aaPredicted RBP8.67□□□□□ -1.02
LYST-208ENST00000473037 RASSF8Q8NHQ8 419 aa8.67□□□□□ -1.02
LYST-208ENST00000473037 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
LYST-208ENST00000473037 BIVM-ERCC5R4GMW8 1640 aa8.67□□□□□ -1.02
LYST-208ENST00000473037 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
LYST-208ENST00000473037 ZNF692Q9BU19 519 aaPredicted RBP8.67□□□□□ -1.02
LYST-208ENST00000473037 TPM3P06753 285 aa8.67□□□□□ -1.02
LYST-208ENST00000473037 RRP1P56182 461 aaKnown RBP8.67□□□□□ -1.02
LYST-208ENST00000473037 RBM19Q9Y4C8 960 aaKnown RBP8.67□□□□□ -1.02
LYST-208ENST00000473037 ZNF428Q96B54 188 aa8.66□□□□□ -1.02
LYST-208ENST00000473037 TPM2P07951 284 aa8.66□□□□□ -1.02
LYST-208ENST00000473037 TPM1P09493 284 aa8.66□□□□□ -1.02
LYST-208ENST00000473037 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
LYST-208ENST00000473037 ATAD2Q6PL18 1390 aa8.66□□□□□ -1.02
LYST-208ENST00000473037 TSR1Q2NL82 804 aaKnown RBP8.65□□□□□ -1.02
LYST-208ENST00000473037 TRDNQ13061 729 aa8.65□□□□□ -1.02
LYST-208ENST00000473037 SF3A1Q15459 793 aaKnown RBP8.65□□□□□ -1.02
LYST-208ENST00000473037 LTV1Q96GA3 475 aaPredicted RBP8.65□□□□□ -1.02
LYST-208ENST00000473037 GOLGA6L3A6NEY3 463 aa8.65□□□□□ -1.03
LYST-208ENST00000473037 H3BQV1 296 aa8.65□□□□□ -1.03
LYST-208ENST00000473037 IFFO2Q5TF58 517 aa8.65□□□□□ -1.03
LYST-208ENST00000473037 CCDC146Q8IYE0 955 aa8.65□□□□□ -1.03
LYST-208ENST00000473037 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
LYST-208ENST00000473037 G3BP1Q13283 466 aaKnown RBP eCLIP8.64□□□□□ -1.03
LYST-208ENST00000473037 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
LYST-208ENST00000473037 CCDC47Q96A33 483 aaKnown RBP8.64□□□□□ -1.03
LYST-208ENST00000473037 CEP89Q96ST8 783 aa8.64□□□□□ -1.03
LYST-208ENST00000473037 RIPK4P57078 832 aa8.64□□□□□ -1.03
LYST-208ENST00000473037 FAM184AQ8NB25 1140 aa8.64□□□□□ -1.03
LYST-208ENST00000473037 ANKRD20A12PQ8NF67 263 aa8.64□□□□□ -1.03
LYST-208ENST00000473037 IFIT2P09913 472 aaKnown RBP8.64□□□□□ -1.03
LYST-208ENST00000473037 HIP1O00291 1037 aa8.64□□□□□ -1.03
LYST-208ENST00000473037 PPP6R1Q9UPN7 881 aa8.64□□□□□ -1.03
LYST-208ENST00000473037 PNISRQ8TF01 805 aaKnown RBP8.63□□□□□ -1.03
LYST-208ENST00000473037 NOC3LQ8WTT2 800 aaKnown RBP8.63□□□□□ -1.03
LYST-208ENST00000473037 TRIM29Q14134 588 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 PTPN23Q9H3S7 1636 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 GNAI3P08754 354 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 VPS37DQ86XT2 251 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 TPRNQ4KMQ1 711 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
LYST-208ENST00000473037 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
LYST-208ENST00000473037 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
LYST-208ENST00000473037 MARCH6O60337 910 aa8.62□□□□□ -1.03
LYST-208ENST00000473037 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
LYST-208ENST00000473037 GOLGA6L1Q8N7Z2 621 aa8.62□□□□□ -1.03
LYST-208ENST00000473037 ANKRD45Q5TZF3 282 aa8.62□□□□□ -1.03
LYST-208ENST00000473037 KIF7Q2M1P5 1343 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms