RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 CCDC61Q9Y6R9 512 aa6.17□□□□□ -1.42
UBE2D4-210ENST00000473007 ARAP1Q96P48 1450 aa6.16□□□□□ -1.42
UBE2D4-210ENST00000473007 RAPGEF2Q9Y4G8 1499 aa6.16□□□□□ -1.42
UBE2D4-210ENST00000473007 KIAA0586Q9BVV6 1533 aa6.16□□□□□ -1.42
UBE2D4-210ENST00000473007 TBC1D12O60347 775 aa6.16□□□□□ -1.42
UBE2D4-210ENST00000473007 CSB-PGBD3P0DP91 1061 aa6.16□□□□□ -1.42
UBE2D4-210ENST00000473007 GLMNQ92990 594 aa6.16□□□□□ -1.42
UBE2D4-210ENST00000473007 POM121CA8CG34 1229 aa6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 SOCS7O14512 581 aa6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 SSTR3P32745 418 aaPredicted RBP6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 CLCN1P35523 988 aa6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 RFC5P40937 340 aa6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 SRPK2P78362 688 aaKnown RBP6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 WWC1Q8IX03 1113 aa6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 GDPD2Q9HCC8 539 aa6.15□□□□□ -1.42
UBE2D4-210ENST00000473007 CARMIL1Q5VZK9 1371 aa6.15□□□□□ -1.43
UBE2D4-210ENST00000473007 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.43
UBE2D4-210ENST00000473007 IQGAP2Q13576 1575 aa6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 CEP170Q5SW79 1584 aa6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 RBM47A0AV96 593 aaKnown RBP6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 CARNS1A5YM72 827 aa6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 CCDC125Q86Z20 511 aa6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 FBXO41Q8TF61 875 aa6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 AKT1S1Q96B36 256 aa6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 BEGAINQ9BUH8 593 aa6.14□□□□□ -1.43
UBE2D4-210ENST00000473007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.13□□□□□ -1.43
UBE2D4-210ENST00000473007 KDM4FA0A1W2PPD8 638 aa6.13□□□□□ -1.43
UBE2D4-210ENST00000473007 DSG2Q14126 1118 aa6.13□□□□□ -1.43
UBE2D4-210ENST00000473007 GPCPD1Q9NPB8 672 aa6.13□□□□□ -1.43
UBE2D4-210ENST00000473007 UGGT2Q9NYU1 1516 aa6.13□□□□□ -1.43
UBE2D4-210ENST00000473007 RFX1P22670 979 aa6.12□□□□□ -1.43
UBE2D4-210ENST00000473007 MDM2Q00987 491 aaPredicted RBP6.12□□□□□ -1.43
UBE2D4-210ENST00000473007 TMEM259Q4ZIN3 620 aa6.12□□□□□ -1.43
UBE2D4-210ENST00000473007 MYSM1Q5VVJ2 828 aa6.12□□□□□ -1.43
UBE2D4-210ENST00000473007 CHMP7Q8WUX9 453 aaPredicted RBP6.12□□□□□ -1.43
UBE2D4-210ENST00000473007 ABL2P42684 1182 aa6.11□□□□□ -1.43
UBE2D4-210ENST00000473007 PTGDRQ13258 359 aa6.11□□□□□ -1.43
UBE2D4-210ENST00000473007 ILDR2Q71H61 639 aa6.11□□□□□ -1.43
UBE2D4-210ENST00000473007 MTMR14Q8NCE2 650 aa6.11□□□□□ -1.43
UBE2D4-210ENST00000473007 VRTNQ9H8Y1 702 aa6.11□□□□□ -1.43
UBE2D4-210ENST00000473007 EFCAB5A4FU69 1503 aa6.1□□□□□ -1.43
UBE2D4-210ENST00000473007 GOLGA3Q08378 1498 aa6.1□□□□□ -1.43
UBE2D4-210ENST00000473007 CLK2P49760 499 aaKnown RBP6.1□□□□□ -1.43
UBE2D4-210ENST00000473007 CFAP70Q5T0N1 1121 aa6.1□□□□□ -1.43
UBE2D4-210ENST00000473007 FBXO31Q5XUX0 539 aaPredicted RBP6.1□□□□□ -1.43
UBE2D4-210ENST00000473007 KIAA1522Q9P206 1035 aaPredicted RBP6.1□□□□□ -1.43
UBE2D4-210ENST00000473007 SAMD9Q5K651 1589 aa6.1□□□□□ -1.43
UBE2D4-210ENST00000473007 PTGER2P43116 358 aa6.09□□□□□ -1.43
UBE2D4-210ENST00000473007 PPP2R2DQ66LE6 453 aa6.09□□□□□ -1.43
UBE2D4-210ENST00000473007 MAP3K13O43283 966 aa6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 PRIM1P49642 420 aaKnown RBP6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 MAP3K9P80192 1104 aa6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 FOXK1P85037 733 aa6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 HDGFL1Q5TGJ6 251 aa6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 PHOX2BQ99453 314 aa6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 FAM217BQ9NTX9 383 aaPredicted RBP6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 GNEQ9Y223 722 aaKnown RBP6.08□□□□□ -1.44
UBE2D4-210ENST00000473007 KIAA0556O60303 1618 aa6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 PPM1GO15355 546 aaPredicted RBP6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 CANXP27824 592 aaKnown RBP6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 TXNDC2Q86VQ3 553 aa6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 REM2Q8IYK8 340 aaPredicted RBP6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 PRM3Q9NNZ6 103 aa6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 TBC1D2BQ9UPU7 963 aa6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 CARMIL2Q6F5E8 1435 aa6.07□□□□□ -1.44
UBE2D4-210ENST00000473007 TMEM88BA6NKF7 163 aa6.06□□□□□ -1.44
UBE2D4-210ENST00000473007 ADAMTS19Q8TE59 1207 aa6.06□□□□□ -1.44
UBE2D4-210ENST00000473007 DDX12PQ92771 950 aa6.06□□□□□ -1.44
UBE2D4-210ENST00000473007 MRRFQ96E11 262 aaKnown RBP6.06□□□□□ -1.44
UBE2D4-210ENST00000473007 KIF12Q96FN5 646 aa6.06□□□□□ -1.44
UBE2D4-210ENST00000473007 UHRF1BP1LA0JNW5 1464 aa6.05□□□□□ -1.44
UBE2D4-210ENST00000473007 PPP1R12CQ9BZL4 782 aa6.05□□□□□ -1.44
UBE2D4-210ENST00000473007 DISP1Q96F81 1524 aa6.04□□□□□ -1.44
UBE2D4-210ENST00000473007 PLPP6Q8IY26 295 aa6.04□□□□□ -1.44
UBE2D4-210ENST00000473007 DRC1Q96MC2 740 aa6.04□□□□□ -1.44
UBE2D4-210ENST00000473007 FARP1Q9Y4F1 1045 aaPredicted RBP6.04□□□□□ -1.44
UBE2D4-210ENST00000473007 ATG7O95352 703 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 ERCC3P19447 782 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 GOLGA2Q08379 1002 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 CHADLQ6NUI6 762 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 JPH4Q96JJ6 628 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 TBC1D2Q9BYX2 928 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 LIMD1Q9UGP4 676 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 MAPKBP1O60336 1514 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 TNIKQ9UKE5 1360 aa6.03□□□□□ -1.44
UBE2D4-210ENST00000473007 ERCC6L2Q5T890 1561 aa6.02□□□□□ -1.45
UBE2D4-210ENST00000473007 PRG4Q92954 1404 aaPredicted RBP6.02□□□□□ -1.45
UBE2D4-210ENST00000473007 DIXDC1Q155Q3 683 aa6.02□□□□□ -1.45
UBE2D4-210ENST00000473007 DNAJC14Q6Y2X3 702 aaPredicted RBP6.02□□□□□ -1.45
UBE2D4-210ENST00000473007 TMC2Q8TDI7 906 aa6.02□□□□□ -1.45
UBE2D4-210ENST00000473007 SPATA32Q96LK8 384 aa6.02□□□□□ -1.45
UBE2D4-210ENST00000473007 DISP3Q9P2K9 1392 aa6.02□□□□□ -1.45
UBE2D4-210ENST00000473007 PALM3A6NDB9 673 aaPredicted RBP6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 SMARCA5O60264 1052 aaPredicted RBP6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 TCF3P15923 654 aa6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 ZNF16P17020 682 aaPredicted RBP6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 LMOD1P29536 600 aaPredicted RBP6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 SREK1Q8WXA9 508 aaKnown RBP6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 SIRT1Q96EB6 747 aa6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 C8orf37Q96NL8 207 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms