RNA–Protein interactions for RNA: ENST00000472776.1

CLASP1-210, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 2

Gene CLASP1, Length 1,982 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-210ENST00000472776 STAG3Q9UJ98 1225 aa22.18■■□□□ 1.14
CLASP1-210ENST00000472776 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
CLASP1-210ENST00000472776 NUTM2DQ5VT03 806 aaPredicted RBP22.17■■□□□ 1.14
CLASP1-210ENST00000472776 TRPM1Q7Z4N2 1603 aa22.17■■□□□ 1.14
CLASP1-210ENST00000472776 KDM4FA0A1W2PPD8 638 aa22.16■■□□□ 1.14
CLASP1-210ENST00000472776 KDM5AP29375 1690 aaKnown RBP22.16■■□□□ 1.14
CLASP1-210ENST00000472776 RALGAPBQ86X10 1494 aa22.15■■□□□ 1.14
CLASP1-210ENST00000472776 NRXN1Q9ULB1 1477 aa22.15■■□□□ 1.14
CLASP1-210ENST00000472776 RPGRIP1LQ68CZ1 1315 aa22.15■■□□□ 1.14
CLASP1-210ENST00000472776 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
CLASP1-210ENST00000472776 STAC3Q96MF2 364 aa22.11■■□□□ 1.13
CLASP1-210ENST00000472776 CEP170BQ9Y4F5 1589 aaPredicted RBP22.11■■□□□ 1.13
CLASP1-210ENST00000472776 ZFYVE9O95405 1425 aa22.11■■□□□ 1.13
CLASP1-210ENST00000472776 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
CLASP1-210ENST00000472776 PIK3C2GO75747 1445 aa22.09■■□□□ 1.13
CLASP1-210ENST00000472776 RIMS2Q9UQ26 1411 aa22.09■■□□□ 1.13
CLASP1-210ENST00000472776 ZNF142P52746 1687 aaPredicted RBP22.08■■□□□ 1.13
CLASP1-210ENST00000472776 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
CLASP1-210ENST00000472776 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
CLASP1-210ENST00000472776 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
CLASP1-210ENST00000472776 VGFO15240 615 aaPredicted RBP22.06■■□□□ 1.12
CLASP1-210ENST00000472776 KIAA1210Q9ULL0 1709 aa22.05■■□□□ 1.12
CLASP1-210ENST00000472776 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
CLASP1-210ENST00000472776 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
CLASP1-210ENST00000472776 GPRASP1Q5JY77 1395 aa22.04■■□□□ 1.12
CLASP1-210ENST00000472776 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
CLASP1-210ENST00000472776 SLIT1O75093 1534 aa22.03■■□□□ 1.12
CLASP1-210ENST00000472776 ARHGAP23Q9P227 1491 aa22.03■■□□□ 1.12
CLASP1-210ENST00000472776 LTKP29376 864 aa22.01■■□□□ 1.11
CLASP1-210ENST00000472776 C14orf93Q9H972 538 aaKnown RBP22■■□□□ 1.11
CLASP1-210ENST00000472776 LAMC1P11047 1609 aa22■■□□□ 1.11
CLASP1-210ENST00000472776 NRXN3Q9Y4C0 1643 aa22■■□□□ 1.11
CLASP1-210ENST00000472776 ZNF316A6NFI3 1004 aaPredicted RBP21.99■■□□□ 1.11
CLASP1-210ENST00000472776 HSPA5P11021 654 aaKnown RBP21.99■■□□□ 1.11
CLASP1-210ENST00000472776 THEMISQ8N1K5 641 aaPredicted RBP21.99■■□□□ 1.11
CLASP1-210ENST00000472776 USP47Q96K76 1375 aa21.99■■□□□ 1.11
CLASP1-210ENST00000472776 ADGRB1O14514 1584 aa21.98■■□□□ 1.11
CLASP1-210ENST00000472776 EIF4G2P78344 907 aaKnown RBP eCLIP21.98■■□□□ 1.11
CLASP1-210ENST00000472776 IQGAP1P46940 1657 aa21.97■■□□□ 1.11
CLASP1-210ENST00000472776 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
CLASP1-210ENST00000472776 ASXL1Q8IXJ9 1541 aa21.97■■□□□ 1.11
CLASP1-210ENST00000472776 SETBP1Q9Y6X0 1596 aa21.96■■□□□ 1.11
CLASP1-210ENST00000472776 SETD1AO15047 1707 aaKnown RBP21.96■■□□□ 1.11
CLASP1-210ENST00000472776 ALKQ9UM73 1620 aa21.96■■□□□ 1.11
CLASP1-210ENST00000472776 TXNDC2Q86VQ3 553 aa21.96■■□□□ 1.11
CLASP1-210ENST00000472776 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
CLASP1-210ENST00000472776 HDGFP51858 240 aaKnown RBP21.92■■□□□ 1.1
CLASP1-210ENST00000472776 SCAF11Q99590 1463 aaKnown RBP21.92■■□□□ 1.1
CLASP1-210ENST00000472776 EID1Q9Y6B2 187 aa21.91■■□□□ 1.1
CLASP1-210ENST00000472776 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
CLASP1-210ENST00000472776 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
CLASP1-210ENST00000472776 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.1
CLASP1-210ENST00000472776 LMTK3Q96Q04 1460 aa21.86■■□□□ 1.09
CLASP1-210ENST00000472776 METP08581 1390 aa21.86■■□□□ 1.09
CLASP1-210ENST00000472776 MED14O60244 1454 aa21.85■■□□□ 1.09
CLASP1-210ENST00000472776 BCANQ96GW7 911 aa21.85■■□□□ 1.09
CLASP1-210ENST00000472776 C11orf95C9JLR9 678 aaPredicted RBP21.85■■□□□ 1.09
CLASP1-210ENST00000472776 POLR1AO95602 1720 aaPredicted RBP21.84■■□□□ 1.09
CLASP1-210ENST00000472776 ANKLE2Q86XL3 938 aa21.84■■□□□ 1.09
CLASP1-210ENST00000472776 SLC26A8Q96RN1 970 aa21.84■■□□□ 1.09
CLASP1-210ENST00000472776 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
CLASP1-210ENST00000472776 ARHGEF28Q8N1W1 1705 aaKnown RBP21.83■■□□□ 1.09
CLASP1-210ENST00000472776 YTHDC2Q9H6S0 1430 aaKnown RBP21.83■■□□□ 1.08
CLASP1-210ENST00000472776 HSPA2P54652 639 aa21.83■■□□□ 1.08
CLASP1-210ENST00000472776 TESK2Q96S53 571 aa21.81■■□□□ 1.08
CLASP1-210ENST00000472776 STK26Q9P289 416 aa21.81■■□□□ 1.08
CLASP1-210ENST00000472776 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
CLASP1-210ENST00000472776 WASHC2AQ641Q2 1341 aa21.79■■□□□ 1.08
CLASP1-210ENST00000472776 EIF3AQ14152 1382 aaKnown RBP21.78■■□□□ 1.08
CLASP1-210ENST00000472776 LRPPRCP42704 1394 aaKnown RBP21.77■■□□□ 1.08
CLASP1-210ENST00000472776 DIP2AQ14689 1571 aa21.77■■□□□ 1.08
CLASP1-210ENST00000472776 NPHP4O75161 1426 aaPredicted RBP21.76■■□□□ 1.07
CLASP1-210ENST00000472776 PTPRUQ92729 1446 aa21.76■■□□□ 1.07
CLASP1-210ENST00000472776 TBX22Q9Y458 520 aa21.76■■□□□ 1.07
CLASP1-210ENST00000472776 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
CLASP1-210ENST00000472776 KIF7Q2M1P5 1343 aa21.75■■□□□ 1.07
CLASP1-210ENST00000472776 CENPJQ9HC77 1338 aaPredicted RBP21.74■■□□□ 1.07
CLASP1-210ENST00000472776 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
CLASP1-210ENST00000472776 KNDC1Q76NI1 1749 aa21.74■■□□□ 1.07
CLASP1-210ENST00000472776 CCDC7Q96M83 1385 aa21.74■■□□□ 1.07
CLASP1-210ENST00000472776 ABCC11Q96J66 1382 aa21.73■■□□□ 1.07
CLASP1-210ENST00000472776 DLC1Q96QB1 1528 aa21.72■■□□□ 1.07
CLASP1-210ENST00000472776 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
CLASP1-210ENST00000472776 TECPR2O15040 1411 aa21.71■■□□□ 1.07
CLASP1-210ENST00000472776 SAFB2Q14151 953 aaKnown RBP eCLIP21.71■■□□□ 1.07
CLASP1-210ENST00000472776 PRAM1Q96QH2 718 aa21.71■■□□□ 1.07
CLASP1-210ENST00000472776 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
CLASP1-210ENST00000472776 CPS1P31327 1500 aa21.7■■□□□ 1.06
CLASP1-210ENST00000472776 WAPLQ7Z5K2 1190 aa21.69■■□□□ 1.06
CLASP1-210ENST00000472776 ROBO2Q9HCK4 1378 aa21.69■■□□□ 1.06
CLASP1-210ENST00000472776 SBNO2Q9Y2G9 1366 aa21.69■■□□□ 1.06
CLASP1-210ENST00000472776 XRN1Q8IZH2 1706 aaKnown RBP21.69■■□□□ 1.06
CLASP1-210ENST00000472776 SCAF1Q9H7N4 1312 aaKnown RBP21.68■■□□□ 1.06
CLASP1-210ENST00000472776 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
CLASP1-210ENST00000472776 CHD2O14647 1828 aaKnown RBP21.67■■□□□ 1.06
CLASP1-210ENST00000472776 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
CLASP1-210ENST00000472776 AMOTL2Q9Y2J4 779 aa21.67■■□□□ 1.06
CLASP1-210ENST00000472776 TMF1P82094 1093 aa21.66■■□□□ 1.06
CLASP1-210ENST00000472776 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
CLASP1-210ENST00000472776 POGKQ9P215 609 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms