RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 RIMS2Q9UQ26 1411 aa29.2■■■□□ 2.26
SF1-213ENST00000472725 RPGRIP1LQ68CZ1 1315 aa29.2■■■□□ 2.26
SF1-213ENST00000472725 TXNDC2Q86VQ3 553 aa29.19■■■□□ 2.26
SF1-213ENST00000472725 SPATA31E1Q6ZUB1 1445 aa29.19■■■□□ 2.26
SF1-213ENST00000472725 NCKAP5LQ9HCH0 1330 aa29.18■■■□□ 2.26
SF1-213ENST00000472725 ZNF326Q5BKZ1 582 aaKnown RBP29.16■■■□□ 2.26
SF1-213ENST00000472725 LTKP29376 864 aa29.15■■■□□ 2.26
SF1-213ENST00000472725 NPHP4O75161 1426 aaPredicted RBP29.13■■■□□ 2.25
SF1-213ENST00000472725 NEXMIFQ5QGS0 1516 aa29.12■■■□□ 2.25
SF1-213ENST00000472725 IQGAP1P46940 1657 aa29.12■■■□□ 2.25
SF1-213ENST00000472725 PPLO60437 1756 aa29.09■■■□□ 2.25
SF1-213ENST00000472725 PPP1R15AO75807 674 aaPredicted RBP29.09■■■□□ 2.25
SF1-213ENST00000472725 PLEKHG1Q9ULL1 1385 aa29.09■■■□□ 2.25
SF1-213ENST00000472725 VGFO15240 615 aaPredicted RBP29.08■■■□□ 2.25
SF1-213ENST00000472725 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
SF1-213ENST00000472725 STAC3Q96MF2 364 aa29.06■■■□□ 2.24
SF1-213ENST00000472725 IFT172Q9UG01 1749 aa29.06■■■□□ 2.24
SF1-213ENST00000472725 RGL3Q3MIN7 710 aa29.05■■■□□ 2.24
SF1-213ENST00000472725 SETBP1Q9Y6X0 1596 aa29■■■□□ 2.23
SF1-213ENST00000472725 DIP2AQ14689 1571 aa28.99■■■□□ 2.23
SF1-213ENST00000472725 MYOM2P54296 1465 aa28.98■■■□□ 2.23
SF1-213ENST00000472725 NUTM2DQ5VT03 806 aaPredicted RBP28.96■■■□□ 2.23
SF1-213ENST00000472725 TBX22Q9Y458 520 aa28.96■■■□□ 2.23
SF1-213ENST00000472725 BCANQ96GW7 911 aa28.95■■■□□ 2.22
SF1-213ENST00000472725 SIN3AQ96ST3 1273 aa28.95■■■□□ 2.22
SF1-213ENST00000472725 ADAMTS13Q76LX8 1427 aa28.93■■■□□ 2.22
SF1-213ENST00000472725 NRXN3Q9Y4C0 1643 aa28.92■■■□□ 2.22
SF1-213ENST00000472725 NRXN1Q9ULB1 1477 aa28.91■■■□□ 2.22
SF1-213ENST00000472725 PIK3R4Q99570 1358 aa28.91■■■□□ 2.22
SF1-213ENST00000472725 NEUROD1Q13562 356 aa28.89■■■□□ 2.22
SF1-213ENST00000472725 DCAF11Q8TEB1 546 aa28.89■■■□□ 2.22
SF1-213ENST00000472725 SLC26A8Q96RN1 970 aa28.89■■■□□ 2.22
SF1-213ENST00000472725 ADGRF5Q8IZF2 1346 aa28.89■■■□□ 2.21
SF1-213ENST00000472725 PIK3C2GO75747 1445 aa28.88■■■□□ 2.21
SF1-213ENST00000472725 CCER1Q8TC90 406 aaPredicted RBP28.88■■■□□ 2.21
SF1-213ENST00000472725 LAMC1P11047 1609 aa28.84■■■□□ 2.21
SF1-213ENST00000472725 ALKQ9UM73 1620 aa28.84■■■□□ 2.21
SF1-213ENST00000472725 CHD2O14647 1828 aaKnown RBP28.83■■■□□ 2.21
SF1-213ENST00000472725 L3MBTL2Q969R5 705 aa28.82■■■□□ 2.2
SF1-213ENST00000472725 ZNF335Q9H4Z2 1342 aaPredicted RBP28.82■■■□□ 2.2
SF1-213ENST00000472725 CPS1P31327 1500 aa28.82■■■□□ 2.2
SF1-213ENST00000472725 SETD1AO15047 1707 aaKnown RBP28.82■■■□□ 2.2
SF1-213ENST00000472725 LTBP4Q8N2S1 1624 aa28.81■■■□□ 2.2
SF1-213ENST00000472725 TONSLQ96HA7 1378 aa28.81■■■□□ 2.2
SF1-213ENST00000472725 KCNA6P17658 529 aa28.81■■■□□ 2.2
SF1-213ENST00000472725 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
SF1-213ENST00000472725 KDM2AQ9Y2K7 1162 aa28.81■■■□□ 2.2
SF1-213ENST00000472725 NWD1Q149M9 1564 aa28.8■■■□□ 2.2
SF1-213ENST00000472725 C14orf93Q9H972 538 aaKnown RBP28.79■■■□□ 2.2
SF1-213ENST00000472725 SENP3Q9H4L4 574 aaPredicted RBP28.76■■■□□ 2.19
SF1-213ENST00000472725 NKTRP30414 1462 aaKnown RBP28.76■■■□□ 2.19
SF1-213ENST00000472725 METP08581 1390 aa28.75■■■□□ 2.19
SF1-213ENST00000472725 STRCP1A6NGW2 1772 aa28.75■■■□□ 2.19
SF1-213ENST00000472725 KIAA1210Q9ULL0 1709 aa28.74■■■□□ 2.19
SF1-213ENST00000472725 PRAG1Q86YV5 1406 aa28.74■■■□□ 2.19
SF1-213ENST00000472725 XRN1Q8IZH2 1706 aaKnown RBP28.71■■■□□ 2.19
SF1-213ENST00000472725 IQSEC2Q5JU85 1478 aa28.71■■■□□ 2.19
SF1-213ENST00000472725 PTPRUQ92729 1446 aa28.69■■■□□ 2.18
SF1-213ENST00000472725 CFAP70Q5T0N1 1121 aa28.69■■■□□ 2.18
SF1-213ENST00000472725 AMOTL2Q9Y2J4 779 aa28.69■■■□□ 2.18
SF1-213ENST00000472725 LRPPRCP42704 1394 aaKnown RBP28.65■■■□□ 2.18
SF1-213ENST00000472725 ASXL1Q8IXJ9 1541 aa28.65■■■□□ 2.18
SF1-213ENST00000472725 LRRC7Q96NW7 1537 aa28.65■■■□□ 2.18
SF1-213ENST00000472725 CERKQ8TCT0 537 aa28.65■■■□□ 2.18
SF1-213ENST00000472725 NCOA3Q9Y6Q9 1424 aa28.65■■■□□ 2.18
SF1-213ENST00000472725 ABCC11Q96J66 1382 aa28.63■■■□□ 2.17
SF1-213ENST00000472725 KNDC1Q76NI1 1749 aa28.63■■■□□ 2.17
SF1-213ENST00000472725 ADGRB1O14514 1584 aa28.63■■■□□ 2.17
SF1-213ENST00000472725 TECPR2O15040 1411 aa28.63■■■□□ 2.17
SF1-213ENST00000472725 PTCH1Q13635 1447 aa28.63■■■□□ 2.17
SF1-213ENST00000472725 YTHDC2Q9H6S0 1430 aaKnown RBP28.62■■■□□ 2.17
SF1-213ENST00000472725 PROSER2Q86WR7 435 aaPredicted RBP28.62■■■□□ 2.17
SF1-213ENST00000472725 TMEM132EQ6IEE7 984 aa28.6■■■□□ 2.17
SF1-213ENST00000472725 SIRT1Q96EB6 747 aa28.6■■■□□ 2.17
SF1-213ENST00000472725 TRPM1Q7Z4N2 1603 aa28.6■■■□□ 2.17
SF1-213ENST00000472725 TMEM94Q12767 1356 aa28.57■■■□□ 2.16
SF1-213ENST00000472725 XIRP1Q702N8 1843 aaKnown RBP28.57■■■□□ 2.16
SF1-213ENST00000472725 DLC1Q96QB1 1528 aa28.56■■■□□ 2.16
SF1-213ENST00000472725 FAM135BQ49AJ0 1406 aa28.54■■■□□ 2.16
SF1-213ENST00000472725 NBPF8Q3BBV2 869 aa28.54■■■□□ 2.16
SF1-213ENST00000472725 ROBO2Q9HCK4 1378 aa28.52■■■□□ 2.16
SF1-213ENST00000472725 STK26Q9P289 416 aa28.52■■■□□ 2.16
SF1-213ENST00000472725 RALGAPBQ86X10 1494 aa28.51■■■□□ 2.15
SF1-213ENST00000472725 GPRASP1Q5JY77 1395 aa28.5■■■□□ 2.15
SF1-213ENST00000472725 NBPF1Q3BBV0 1214 aa28.5■■■□□ 2.15
SF1-213ENST00000472725 ROCK2O75116 1388 aaKnown RBP28.5■■■□□ 2.15
SF1-213ENST00000472725 MSH6P52701 1360 aa28.48■■■□□ 2.15
SF1-213ENST00000472725 C19orf44Q9H6X5 657 aa28.47■■■□□ 2.15
SF1-213ENST00000472725 DCCP43146 1447 aa28.45■■■□□ 2.15
SF1-213ENST00000472725 ADGRL3Q9HAR2 1447 aa28.44■■■□□ 2.14
SF1-213ENST00000472725 ARHGEF28Q8N1W1 1705 aaKnown RBP28.44■■■□□ 2.14
SF1-213ENST00000472725 TRAK1Q9UPV9 953 aa28.44■■■□□ 2.14
SF1-213ENST00000472725 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
SF1-213ENST00000472725 TOM1O60784 492 aa28.41■■■□□ 2.14
SF1-213ENST00000472725 RBM33Q96EV2 1170 aaKnown RBP28.41■■■□□ 2.14
SF1-213ENST00000472725 NALCNQ8IZF0 1738 aa28.4■■■□□ 2.14
SF1-213ENST00000472725 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.4■■■□□ 2.14
SF1-213ENST00000472725 PRAM1Q96QH2 718 aa28.4■■■□□ 2.14
SF1-213ENST00000472725 POGKQ9P215 609 aa28.4■■■□□ 2.14
SF1-213ENST00000472725 WAPLQ7Z5K2 1190 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms