RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NDUFV2P19404 249 aa4.36□□□□□ -1.71
XRN1-210ENST00000472697 UCN2Q96RP3 112 aa4.36□□□□□ -1.71
XRN1-210ENST00000472697 SPDYE5A6NIY4 337 aa4.36□□□□□ -1.71
XRN1-210ENST00000472697 EVI5O60447 810 aa4.36□□□□□ -1.71
XRN1-210ENST00000472697 IRX5P78411 483 aaPredicted RBP4.36□□□□□ -1.71
XRN1-210ENST00000472697 RTL5Q5HYW3 569 aaPredicted RBP4.36□□□□□ -1.71
XRN1-210ENST00000472697 HDGFL1Q5TGJ6 251 aa4.36□□□□□ -1.71
XRN1-210ENST00000472697 MAP3K7O43318 606 aa4.35□□□□□ -1.71
XRN1-210ENST00000472697 CABLES1Q8TDN4 633 aa4.35□□□□□ -1.71
XRN1-210ENST00000472697 VAC14Q08AM6 782 aa4.35□□□□□ -1.71
XRN1-210ENST00000472697 KIAA1522Q9P206 1035 aaPredicted RBP4.35□□□□□ -1.71
XRN1-210ENST00000472697 TAGLNQ01995 201 aaKnown RBP4.34□□□□□ -1.71
XRN1-210ENST00000472697 MOXD2PA6NHM9 499 aa4.34□□□□□ -1.72
XRN1-210ENST00000472697 CLCN1P35523 988 aa4.34□□□□□ -1.72
XRN1-210ENST00000472697 GUCA2AQ02747 115 aa4.34□□□□□ -1.72
XRN1-210ENST00000472697 GJD4Q96KN9 370 aaPredicted RBP4.34□□□□□ -1.72
XRN1-210ENST00000472697 PCDHGA10Q9Y5H3 936 aa4.34□□□□□ -1.72
XRN1-210ENST00000472697 E9PSI1 815 aa4.33□□□□□ -1.72
XRN1-210ENST00000472697 PADI6Q6TGC4 694 aa4.33□□□□□ -1.72
XRN1-210ENST00000472697 TMEM88BA6NKF7 163 aa4.33□□□□□ -1.72
XRN1-210ENST00000472697 PLCG2P16885 1265 aa4.33□□□□□ -1.72
XRN1-210ENST00000472697 SLAIN2Q9P270 581 aa4.33□□□□□ -1.72
XRN1-210ENST00000472697 FAM198AQ9UFP1 575 aa4.33□□□□□ -1.72
XRN1-210ENST00000472697 NISCHQ9Y2I1 1504 aa4.33□□□□□ -1.72
XRN1-210ENST00000472697 AP1G2O75843 785 aa4.32□□□□□ -1.72
XRN1-210ENST00000472697 OCEL1Q9H607 264 aa4.32□□□□□ -1.72
XRN1-210ENST00000472697 PTGER2P43116 358 aa4.32□□□□□ -1.72
XRN1-210ENST00000472697 PXYLP1Q8TE99 480 aa4.32□□□□□ -1.72
XRN1-210ENST00000472697 SHROOM4Q9ULL8 1493 aa4.32□□□□□ -1.72
XRN1-210ENST00000472697 EN1Q05925 392 aaPredicted RBP4.31□□□□□ -1.72
XRN1-210ENST00000472697 CCDC27Q2M243 656 aa4.31□□□□□ -1.72
XRN1-210ENST00000472697 PHLDB3Q6NSJ2 640 aa4.31□□□□□ -1.72
XRN1-210ENST00000472697 SLAIN1Q8ND83 568 aa4.31□□□□□ -1.72
XRN1-210ENST00000472697 SPIRE2Q8WWL2 714 aa4.31□□□□□ -1.72
XRN1-210ENST00000472697 PALM3A6NDB9 673 aaPredicted RBP4.31□□□□□ -1.72
XRN1-210ENST00000472697 LMOD1P29536 600 aaPredicted RBP4.31□□□□□ -1.72
XRN1-210ENST00000472697 STK32AQ8WU08 396 aa4.31□□□□□ -1.72
XRN1-210ENST00000472697 LRRN4Q8WUT4 740 aa4.31□□□□□ -1.72
XRN1-210ENST00000472697 TRIM34Q9BYJ4 488 aa4.31□□□□□ -1.72
XRN1-210ENST00000472697 CTDSPL2Q05D32 466 aa4.3□□□□□ -1.72
XRN1-210ENST00000472697 PRR7Q8TB68 274 aa4.3□□□□□ -1.72
XRN1-210ENST00000472697 PBXIP1Q96AQ6 731 aa4.3□□□□□ -1.72
XRN1-210ENST00000472697 USP17L8P0C7I0 530 aa4.3□□□□□ -1.72
XRN1-210ENST00000472697 PPP1R12CQ9BZL4 782 aa4.3□□□□□ -1.72
XRN1-210ENST00000472697 TFIP11Q9UBB9 837 aaKnown RBP4.3□□□□□ -1.72
XRN1-210ENST00000472697 ADGRG1Q9Y653 693 aa4.3□□□□□ -1.72
XRN1-210ENST00000472697 PIK3CDO00329 1044 aa4.29□□□□□ -1.72
XRN1-210ENST00000472697 ST18O60284 1047 aa4.29□□□□□ -1.72
XRN1-210ENST00000472697 LGR5O75473 907 aa4.29□□□□□ -1.72
XRN1-210ENST00000472697 RIC3Q7Z5B4 369 aa4.29□□□□□ -1.72
XRN1-210ENST00000472697 TXNDC2Q86VQ3 553 aa4.29□□□□□ -1.72
XRN1-210ENST00000472697 KHSRPQ92945 711 aaKnown RBP eCLIP4.29□□□□□ -1.721e-6■■■■■ 30.3
XRN1-210ENST00000472697 BOLA1Q9Y3E2 137 aa4.29□□□□□ -1.72
XRN1-210ENST00000472697 SNPHO15079 494 aa4.29□□□□□ -1.72
XRN1-210ENST00000472697 SMAPO00193 183 aa4.28□□□□□ -1.72
XRN1-210ENST00000472697 BRD1O95696 1058 aa4.28□□□□□ -1.72
XRN1-210ENST00000472697 TBC1D9Q6ZT07 1266 aa4.28□□□□□ -1.72
XRN1-210ENST00000472697 SYMPKQ92797 1274 aaKnown RBP4.28□□□□□ -1.72
XRN1-210ENST00000472697 IGSF5Q9NSI5 407 aa4.28□□□□□ -1.72
XRN1-210ENST00000472697 ZMIZ1Q9ULJ6 1067 aa4.28□□□□□ -1.72
XRN1-210ENST00000472697 PCDHGC3Q9UN70 934 aa4.28□□□□□ -1.72
XRN1-210ENST00000472697 PPP2R2DQ66LE6 453 aa4.28□□□□□ -1.73
XRN1-210ENST00000472697 SND1Q7KZF4 910 aaKnown RBP eCLIP4.28□□□□□ -1.73
XRN1-210ENST00000472697 FAM177A1Q8N128 213 aaPredicted RBP4.28□□□□□ -1.73
XRN1-210ENST00000472697 SERPINB4P48594 390 aa4.27□□□□□ -1.73
XRN1-210ENST00000472697 RSBN1LQ6PCB5 846 aaPredicted RBP4.27□□□□□ -1.73
XRN1-210ENST00000472697 TSC1Q92574 1164 aa4.27□□□□□ -1.73
XRN1-210ENST00000472697 ZNF710Q8N1W2 664 aa4.27□□□□□ -1.73
XRN1-210ENST00000472697 DEPDC4Q8N2C3 294 aa4.27□□□□□ -1.73
XRN1-210ENST00000472697 GAS2L2Q8NHY3 880 aa4.27□□□□□ -1.73
XRN1-210ENST00000472697 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.27□□□□□ -1.73
XRN1-210ENST00000472697 DDX11L8A8MPP1 907 aa4.26□□□□□ -1.73
XRN1-210ENST00000472697 PER1O15534 1290 aaPredicted RBP4.26□□□□□ -1.73
XRN1-210ENST00000472697 PPP1R15AO75807 674 aaPredicted RBP4.26□□□□□ -1.73
XRN1-210ENST00000472697 TMEM164Q5U3C3 297 aa4.26□□□□□ -1.73
XRN1-210ENST00000472697 L3MBTL3Q96JM7 780 aaPredicted RBP4.26□□□□□ -1.73
XRN1-210ENST00000472697 CHMP4AQ9BY43 222 aa4.26□□□□□ -1.73
XRN1-210ENST00000472697 ACIN1Q9UKV3 1341 aaKnown RBP4.26□□□□□ -1.73
XRN1-210ENST00000472697 LILRB3O75022 631 aa4.25□□□□□ -1.73
XRN1-210ENST00000472697 MRRFQ96E11 262 aaKnown RBP4.25□□□□□ -1.73
XRN1-210ENST00000472697 MYT1LQ9UL68 1186 aa4.25□□□□□ -1.73
XRN1-210ENST00000472697 DNAJC14Q6Y2X3 702 aaPredicted RBP4.25□□□□□ -1.73
XRN1-210ENST00000472697 ALG2Q9H553 416 aa4.25□□□□□ -1.73
XRN1-210ENST00000472697 VRTNQ9H8Y1 702 aa4.25□□□□□ -1.73
XRN1-210ENST00000472697 ANO8Q9HCE9 1232 aaPredicted RBP4.24□□□□□ -1.73
XRN1-210ENST00000472697 MAFBQ9Y5Q3 323 aaPredicted RBP4.24□□□□□ -1.73
XRN1-210ENST00000472697 RCCD1A6NED2 376 aa4.24□□□□□ -1.73
XRN1-210ENST00000472697 COL9A1P20849 921 aa4.24□□□□□ -1.73
XRN1-210ENST00000472697 BANK1Q8NDB2 785 aa4.24□□□□□ -1.73
XRN1-210ENST00000472697 ADAM33Q9BZ11 813 aa4.24□□□□□ -1.73
XRN1-210ENST00000472697 NUTM2BA6NNL0 878 aaPredicted RBP4.23□□□□□ -1.73
XRN1-210ENST00000472697 NUTM2EB1AL46 878 aaPredicted RBP4.23□□□□□ -1.73
XRN1-210ENST00000472697 CFAP99D6REC4 459 aa4.23□□□□□ -1.73
XRN1-210ENST00000472697 CD46P15529 392 aa4.23□□□□□ -1.73
XRN1-210ENST00000472697 NUTM2DQ5VT03 806 aaPredicted RBP4.23□□□□□ -1.73
XRN1-210ENST00000472697 NUTM2AQ8IVF1 878 aaPredicted RBP4.23□□□□□ -1.73
XRN1-210ENST00000472697 CSB-PGBD3P0DP91 1061 aa4.23□□□□□ -1.73
XRN1-210ENST00000472697 C6orf132Q5T0Z8 1188 aa4.23□□□□□ -1.73
XRN1-210ENST00000472697 PTCD2Q8WV60 388 aaKnown RBP4.23□□□□□ -1.73
XRN1-210ENST00000472697 TSKSQ9UJT2 592 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms