RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 ABCC5O15440 1437 aa21.93■■□□□ 1.1
ABCF3-209ENST00000472608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.1
ABCF3-209ENST00000472608 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
ABCF3-209ENST00000472608 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
ABCF3-209ENST00000472608 PTPN23Q9H3S7 1636 aa21.91■■□□□ 1.1
ABCF3-209ENST00000472608 ADGRB3O60242 1522 aa21.91■■□□□ 1.1
ABCF3-209ENST00000472608 SLC52A1Q9NWF4 448 aa21.91■■□□□ 1.1
ABCF3-209ENST00000472608 CHD2O14647 1828 aaKnown RBP21.88■■□□□ 1.09
ABCF3-209ENST00000472608 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
ABCF3-209ENST00000472608 PLEKHG1Q9ULL1 1385 aa21.87■■□□□ 1.09
ABCF3-209ENST00000472608 CROCC2H7BZ55 1655 aa21.86■■□□□ 1.09
ABCF3-209ENST00000472608 CDK12Q9NYV4 1490 aaPredicted RBP21.86■■□□□ 1.09
ABCF3-209ENST00000472608 PPARGC1BQ86YN6 1023 aaKnown RBP21.86■■□□□ 1.09
ABCF3-209ENST00000472608 AHDC1Q5TGY3 1603 aaPredicted RBP21.85■■□□□ 1.09
ABCF3-209ENST00000472608 TRIM52Q96A61 297 aa21.85■■□□□ 1.09
ABCF3-209ENST00000472608 TBX22Q9Y458 520 aa21.85■■□□□ 1.09
ABCF3-209ENST00000472608 RXRBP28702 533 aa21.84■■□□□ 1.09
ABCF3-209ENST00000472608 MEX3CQ5U5Q3 659 aaKnown RBP21.84■■□□□ 1.09
ABCF3-209ENST00000472608 SRCAPQ6ZRS2 3230 aa21.84■■□□□ 1.09
ABCF3-209ENST00000472608 SHPRHQ149N8 1683 aa21.83■■□□□ 1.09
ABCF3-209ENST00000472608 BCANQ96GW7 911 aa21.83■■□□□ 1.09
ABCF3-209ENST00000472608 DAPK1P53355 1430 aa21.82■■□□□ 1.08
ABCF3-209ENST00000472608 CADPS2Q86UW7 1296 aa21.82■■□□□ 1.08
ABCF3-209ENST00000472608 C19orf44Q9H6X5 657 aa21.81■■□□□ 1.08
ABCF3-209ENST00000472608 HDGFP51858 240 aaKnown RBP21.8■■□□□ 1.08
ABCF3-209ENST00000472608 RPRD2Q5VT52 1461 aaKnown RBP21.79■■□□□ 1.08
ABCF3-209ENST00000472608 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
ABCF3-209ENST00000472608 FAM50AQ14320 339 aaKnown RBP21.79■■□□□ 1.08
ABCF3-209ENST00000472608 RIMS2Q9UQ26 1411 aa21.79■■□□□ 1.08
ABCF3-209ENST00000472608 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
ABCF3-209ENST00000472608 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
ABCF3-209ENST00000472608 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
ABCF3-209ENST00000472608 ADAMTS13Q76LX8 1427 aa21.75■■□□□ 1.07
ABCF3-209ENST00000472608 RRBP1Q9P2E9 1410 aaKnown RBP21.75■■□□□ 1.07
ABCF3-209ENST00000472608 ATF3P18847 181 aa21.75■■□□□ 1.07
ABCF3-209ENST00000472608 PPP1R15AO75807 674 aaPredicted RBP21.74■■□□□ 1.07
ABCF3-209ENST00000472608 BRINP3Q76B58 766 aa21.74■■□□□ 1.07
ABCF3-209ENST00000472608 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
ABCF3-209ENST00000472608 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
ABCF3-209ENST00000472608 C14orf37Q86TY3 774 aa21.72■■□□□ 1.07
ABCF3-209ENST00000472608 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
ABCF3-209ENST00000472608 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
ABCF3-209ENST00000472608 AFF2P51816 1311 aa21.71■■□□□ 1.07
ABCF3-209ENST00000472608 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
ABCF3-209ENST00000472608 DCCP43146 1447 aa21.69■■□□□ 1.06
ABCF3-209ENST00000472608 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
ABCF3-209ENST00000472608 NUTM2BA6NNL0 878 aaPredicted RBP21.68■■□□□ 1.06
ABCF3-209ENST00000472608 NUTM2EB1AL46 878 aaPredicted RBP21.68■■□□□ 1.06
ABCF3-209ENST00000472608 NUTM2AQ8IVF1 878 aaPredicted RBP21.68■■□□□ 1.06
ABCF3-209ENST00000472608 GCC2Q8IWJ2 1684 aa21.68■■□□□ 1.06
ABCF3-209ENST00000472608 RGS12O14924 1447 aa21.67■■□□□ 1.06
ABCF3-209ENST00000472608 RBM6P78332 1123 aaKnown RBP21.66■■□□□ 1.06
ABCF3-209ENST00000472608 AMOTL2Q9Y2J4 779 aa21.65■■□□□ 1.06
ABCF3-209ENST00000472608 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
ABCF3-209ENST00000472608 PTPRUQ92729 1446 aa21.64■■□□□ 1.06
ABCF3-209ENST00000472608 ROCK1Q13464 1354 aa21.64■■□□□ 1.06
ABCF3-209ENST00000472608 QTRT2Q9H974 415 aaKnown RBP21.64■■□□□ 1.05
ABCF3-209ENST00000472608 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
ABCF3-209ENST00000472608 ANKRD50Q9ULJ7 1429 aa21.63■■□□□ 1.05
ABCF3-209ENST00000472608 TRPM2O94759 1503 aa21.61■■□□□ 1.05
ABCF3-209ENST00000472608 MST1RQ04912 1400 aa21.61■■□□□ 1.05
ABCF3-209ENST00000472608 NHSL1Q5SYE7 1610 aa21.6■■□□□ 1.05
ABCF3-209ENST00000472608 NUTM2DQ5VT03 806 aaPredicted RBP21.6■■□□□ 1.05
ABCF3-209ENST00000472608 C8orf37Q96NL8 207 aa21.58■■□□□ 1.05
ABCF3-209ENST00000472608 PNPLA6Q8IY17 1366 aa21.58■■□□□ 1.04
ABCF3-209ENST00000472608 CHGAP10645 457 aaKnown RBP21.57■■□□□ 1.04
ABCF3-209ENST00000472608 ITGAEP38570 1179 aa21.55■■□□□ 1.04
ABCF3-209ENST00000472608 NGLY1Q96IV0 654 aa21.55■■□□□ 1.04
ABCF3-209ENST00000472608 UNC13BO14795 1591 aa21.55■■□□□ 1.04
ABCF3-209ENST00000472608 XRN1Q8IZH2 1706 aaKnown RBP21.55■■□□□ 1.04
ABCF3-209ENST00000472608 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
ABCF3-209ENST00000472608 E9PCH4 1651 aa21.51■■□□□ 1.03
ABCF3-209ENST00000472608 NRXN3Q9Y4C0 1643 aa21.51■■□□□ 1.03
ABCF3-209ENST00000472608 SETBP1Q9Y6X0 1596 aa21.5■■□□□ 1.03
ABCF3-209ENST00000472608 DDX17Q92841 729 aaKnown RBP21.5■■□□□ 1.03
ABCF3-209ENST00000472608 ADGRL3Q9HAR2 1447 aa21.49■■□□□ 1.03
ABCF3-209ENST00000472608 FOXD1Q16676 465 aa21.49■■□□□ 1.03
ABCF3-209ENST00000472608 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
ABCF3-209ENST00000472608 ZRANB1Q9UGI0 708 aa21.48■■□□□ 1.03
ABCF3-209ENST00000472608 LAMC1P11047 1609 aa21.47■■□□□ 1.03
ABCF3-209ENST00000472608 METP08581 1390 aa21.47■■□□□ 1.03
ABCF3-209ENST00000472608 EP400Q96L91 3159 aa21.46■■□□□ 1.03
ABCF3-209ENST00000472608 TRPC5Q9UL62 973 aaPredicted RBP21.46■■□□□ 1.03
ABCF3-209ENST00000472608 ADAMTS2O95450 1211 aa21.45■■□□□ 1.02
ABCF3-209ENST00000472608 USP21Q9UK80 565 aa21.45■■□□□ 1.02
ABCF3-209ENST00000472608 SOS2Q07890 1332 aaPredicted RBP21.45■■□□□ 1.02
ABCF3-209ENST00000472608 PTCH1Q13635 1447 aa21.44■■□□□ 1.02
ABCF3-209ENST00000472608 IQGAP3Q86VI3 1631 aa21.44■■□□□ 1.02
ABCF3-209ENST00000472608 CCDC125Q86Z20 511 aa21.43■■□□□ 1.02
ABCF3-209ENST00000472608 ATRNO75882 1429 aa21.43■■□□□ 1.02
ABCF3-209ENST00000472608 NAIPQ13075 1403 aa21.43■■□□□ 1.02
ABCF3-209ENST00000472608 C1orf167Q5SNV9 1468 aa21.43■■□□□ 1.02
ABCF3-209ENST00000472608 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
ABCF3-209ENST00000472608 NALCNQ8IZF0 1738 aa21.39■■□□□ 1.01
ABCF3-209ENST00000472608 NUP155O75694 1391 aa21.36■■□□□ 1.01
ABCF3-209ENST00000472608 ORAI2Q96SN7 254 aa21.35■■□□□ 1.01
ABCF3-209ENST00000472608 COL22A1Q8NFW1 1626 aaPredicted RBP21.35■■□□□ 1.01
ABCF3-209ENST00000472608 MYOM2P54296 1465 aa21.33■■□□□ 1.01
ABCF3-209ENST00000472608 BCL9LQ86UU0 1499 aa21.33■■□□□ 1.01
ABCF3-209ENST00000472608 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms