RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 COL13A1Q5TAT6 717 aaPredicted RBP16.95■□□□□ 0.3
SPC25-203ENST00000472216 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
SPC25-203ENST00000472216 CDC42BPBQ9Y5S2 1711 aa16.94■□□□□ 0.3
SPC25-203ENST00000472216 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
SPC25-203ENST00000472216 TNS4Q8IZW8 715 aa16.94■□□□□ 0.3
SPC25-203ENST00000472216 SPON1Q9HCB6 807 aa16.94■□□□□ 0.3
SPC25-203ENST00000472216 SLIT1O75093 1534 aa16.93■□□□□ 0.3
SPC25-203ENST00000472216 CAMTA1Q9Y6Y1 1673 aa16.93■□□□□ 0.3
SPC25-203ENST00000472216 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
SPC25-203ENST00000472216 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
SPC25-203ENST00000472216 HSPA6P17066 643 aa16.9■□□□□ 0.3
SPC25-203ENST00000472216 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
SPC25-203ENST00000472216 CLIP1P30622 1438 aa16.88■□□□□ 0.29
SPC25-203ENST00000472216 KIF3BO15066 747 aa16.87■□□□□ 0.29
SPC25-203ENST00000472216 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
SPC25-203ENST00000472216 HNRNPMP52272 730 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPC25-203ENST00000472216 CHD4Q14839 1912 aa16.87■□□□□ 0.29
SPC25-203ENST00000472216 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
SPC25-203ENST00000472216 ZNF777Q9ULD5 760 aaPredicted RBP16.86■□□□□ 0.29
SPC25-203ENST00000472216 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
SPC25-203ENST00000472216 UBR1Q8IWV7 1749 aa16.86■□□□□ 0.29
SPC25-203ENST00000472216 MROH1Q8NDA8 1641 aa16.85■□□□□ 0.29
SPC25-203ENST00000472216 KCNQ2O43526 872 aa16.85■□□□□ 0.29
SPC25-203ENST00000472216 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
SPC25-203ENST00000472216 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
SPC25-203ENST00000472216 CAMSAP2Q08AD1 1489 aa16.83■□□□□ 0.28
SPC25-203ENST00000472216 SPHKAPQ2M3C7 1700 aa16.83■□□□□ 0.28
SPC25-203ENST00000472216 KRT27Q7Z3Y8 459 aa16.83■□□□□ 0.28
SPC25-203ENST00000472216 SEPT12Q8IYM1 358 aa16.83■□□□□ 0.28
SPC25-203ENST00000472216 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
SPC25-203ENST00000472216 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
SPC25-203ENST00000472216 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
SPC25-203ENST00000472216 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
SPC25-203ENST00000472216 DHX29Q7Z478 1369 aaKnown RBP16.8■□□□□ 0.28
SPC25-203ENST00000472216 TMEM2Q9UHN6 1383 aa16.8■□□□□ 0.28
SPC25-203ENST00000472216 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
SPC25-203ENST00000472216 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
SPC25-203ENST00000472216 BCANQ96GW7 911 aa16.79■□□□□ 0.28
SPC25-203ENST00000472216 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
SPC25-203ENST00000472216 EZH2Q15910 746 aaKnown RBP16.78■□□□□ 0.28
SPC25-203ENST00000472216 SYCP2Q9BX26 1530 aa16.78■□□□□ 0.28
SPC25-203ENST00000472216 TET3O43151 1660 aa16.78■□□□□ 0.28
SPC25-203ENST00000472216 BRWD3Q6RI45 1802 aa16.76■□□□□ 0.27
SPC25-203ENST00000472216 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.76■□□□□ 0.27
SPC25-203ENST00000472216 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
SPC25-203ENST00000472216 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
SPC25-203ENST00000472216 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
SPC25-203ENST00000472216 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
SPC25-203ENST00000472216 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
SPC25-203ENST00000472216 NBPF14Q5TI25 921 aa16.74■□□□□ 0.27
SPC25-203ENST00000472216 GPATCH8Q9UKJ3 1502 aaKnown RBP16.72■□□□□ 0.27
SPC25-203ENST00000472216 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
SPC25-203ENST00000472216 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
SPC25-203ENST00000472216 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
SPC25-203ENST00000472216 GLI3P10071 1580 aa16.7■□□□□ 0.26
SPC25-203ENST00000472216 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
SPC25-203ENST00000472216 CAMKK2Q96RR4 588 aa16.69■□□□□ 0.26
SPC25-203ENST00000472216 WWC3Q9ULE0 1092 aa16.66■□□□□ 0.26
SPC25-203ENST00000472216 PLEKHH2Q8IVE3 1493 aa16.65■□□□□ 0.26
SPC25-203ENST00000472216 DNAJC5GQ8N7S2 189 aa16.64■□□□□ 0.25
SPC25-203ENST00000472216 SYT17Q9BSW7 474 aa16.64■□□□□ 0.25
SPC25-203ENST00000472216 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
SPC25-203ENST00000472216 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
SPC25-203ENST00000472216 RGPD1P0DJD0 1748 aa16.63■□□□□ 0.25
SPC25-203ENST00000472216 APLP1P51693 650 aa16.63■□□□□ 0.25
SPC25-203ENST00000472216 DCCP43146 1447 aa16.62■□□□□ 0.25
SPC25-203ENST00000472216 A0A0G2JS52 829 aa16.61■□□□□ 0.25
SPC25-203ENST00000472216 MYT1Q01538 1121 aa16.61■□□□□ 0.25
SPC25-203ENST00000472216 MST1RQ04912 1400 aa16.6■□□□□ 0.25
SPC25-203ENST00000472216 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
SPC25-203ENST00000472216 FHDC1Q9C0D6 1143 aaPredicted RBP16.59■□□□□ 0.25
SPC25-203ENST00000472216 AATKQ6ZMQ8 1374 aa16.59■□□□□ 0.25
SPC25-203ENST00000472216 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.59■□□□□ 0.25
SPC25-203ENST00000472216 SOS2Q07890 1332 aaPredicted RBP16.57■□□□□ 0.24
SPC25-203ENST00000472216 GPR162Q16538 588 aa16.57■□□□□ 0.24
SPC25-203ENST00000472216 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
SPC25-203ENST00000472216 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
SPC25-203ENST00000472216 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
SPC25-203ENST00000472216 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
SPC25-203ENST00000472216 VPS72Q15906 364 aa16.55■□□□□ 0.24
SPC25-203ENST00000472216 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
SPC25-203ENST00000472216 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
SPC25-203ENST00000472216 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
SPC25-203ENST00000472216 APBA3O96018 575 aa16.54■□□□□ 0.24
SPC25-203ENST00000472216 MYOM2P54296 1465 aa16.54■□□□□ 0.24
SPC25-203ENST00000472216 NRKQ7Z2Y5 1582 aa16.53■□□□□ 0.24
SPC25-203ENST00000472216 SLIT2O94813 1529 aa16.52■□□□□ 0.24
SPC25-203ENST00000472216 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
SPC25-203ENST00000472216 FMN1Q68DA7 1419 aa16.52■□□□□ 0.23
SPC25-203ENST00000472216 PIK3C2BO00750 1634 aa16.52■□□□□ 0.23
SPC25-203ENST00000472216 PCNTO95613 3336 aa16.51■□□□□ 0.23
SPC25-203ENST00000472216 ADGRB2O60241 1585 aa16.51■□□□□ 0.23
SPC25-203ENST00000472216 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
SPC25-203ENST00000472216 COL22A1Q8NFW1 1626 aaPredicted RBP16.5■□□□□ 0.23
SPC25-203ENST00000472216 TRIM37O94972 964 aa16.49■□□□□ 0.23
SPC25-203ENST00000472216 PTGER2P43116 358 aa16.49■□□□□ 0.23
SPC25-203ENST00000472216 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
SPC25-203ENST00000472216 DLC1Q96QB1 1528 aa16.48■□□□□ 0.23
SPC25-203ENST00000472216 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
SPC25-203ENST00000472216 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms