RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
CLTC-204ENST00000472129 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
CLTC-204ENST00000472129 DNAJB2P25686 324 aa11.27□□□□□ -0.61
CLTC-204ENST00000472129 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
CLTC-204ENST00000472129 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
CLTC-204ENST00000472129 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
CLTC-204ENST00000472129 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
CLTC-204ENST00000472129 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
CLTC-204ENST00000472129 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
CLTC-204ENST00000472129 RNF40O75150 1001 aa11.25□□□□□ -0.61
CLTC-204ENST00000472129 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
CLTC-204ENST00000472129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
CLTC-204ENST00000472129 TSR3Q9UJK0 312 aaKnown RBP11.23□□□□□ -0.61
CLTC-204ENST00000472129 KCNC4Q03721 635 aa11.22□□□□□ -0.61
CLTC-204ENST00000472129 PPP4CP60510 307 aa11.21□□□□□ -0.61
CLTC-204ENST00000472129 SLF2Q8IX21 1173 aa11.19□□□□□ -0.62
CLTC-204ENST00000472129 SLC10A3P09131 477 aa11.16□□□□□ -0.62
CLTC-204ENST00000472129 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
CLTC-204ENST00000472129 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
CLTC-204ENST00000472129 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
CLTC-204ENST00000472129 APLP1P51693 650 aa11.14□□□□□ -0.63
CLTC-204ENST00000472129 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
CLTC-204ENST00000472129 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
CLTC-204ENST00000472129 AK7Q96M32 723 aa11.12□□□□□ -0.63
CLTC-204ENST00000472129 REPIN1Q9BWE0 567 aaKnown RBP11.12□□□□□ -0.63
CLTC-204ENST00000472129 TRIM66O15016 1216 aa11.1□□□□□ -0.63
CLTC-204ENST00000472129 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
CLTC-204ENST00000472129 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
CLTC-204ENST00000472129 CFHP08603 1231 aa11.08□□□□□ -0.64
CLTC-204ENST00000472129 Q6ZNB5 142 aa11.08□□□□□ -0.64
CLTC-204ENST00000472129 TMUB1Q9BVT8 246 aa11.08□□□□□ -0.64
CLTC-204ENST00000472129 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
CLTC-204ENST00000472129 GPCPD1Q9NPB8 672 aa11.07□□□□□ -0.64
CLTC-204ENST00000472129 CLCN1P35523 988 aa11.06□□□□□ -0.64
CLTC-204ENST00000472129 AMHR2Q16671 573 aa11.06□□□□□ -0.64
CLTC-204ENST00000472129 TTLL12Q14166 644 aaPredicted RBP11.05□□□□□ -0.64
CLTC-204ENST00000472129 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
CLTC-204ENST00000472129 SULF1Q8IWU6 871 aa11.05□□□□□ -0.64
CLTC-204ENST00000472129 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
CLTC-204ENST00000472129 MTRQ99707 1265 aa11.04□□□□□ -0.64
CLTC-204ENST00000472129 FAM217BQ9NTX9 383 aaPredicted RBP11.04□□□□□ -0.64
CLTC-204ENST00000472129 CD46P15529 392 aa11.03□□□□□ -0.64
CLTC-204ENST00000472129 KMT5BQ4FZB7 885 aa11.03□□□□□ -0.64
CLTC-204ENST00000472129 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.65
CLTC-204ENST00000472129 GCGRP47871 477 aa11.02□□□□□ -0.65
CLTC-204ENST00000472129 COPS2P61201 443 aa11.02□□□□□ -0.65
CLTC-204ENST00000472129 PDE4DQ08499 809 aa11.02□□□□□ -0.65
CLTC-204ENST00000472129 PARP9Q8IXQ6 854 aa11.02□□□□□ -0.65
CLTC-204ENST00000472129 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
CLTC-204ENST00000472129 ZNF516Q92618 1163 aa11.01□□□□□ -0.65
CLTC-204ENST00000472129 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
CLTC-204ENST00000472129 IL21Q9HBE4 155 aa11.01□□□□□ -0.65
CLTC-204ENST00000472129 PCDHB3Q9Y5E6 796 aa11.01□□□□□ -0.65
CLTC-204ENST00000472129 SSTR3P32745 418 aaPredicted RBP11□□□□□ -0.65
CLTC-204ENST00000472129 BLOC1S3Q6QNY0 202 aa11□□□□□ -0.65
CLTC-204ENST00000472129 LCE2BO14633 110 aa10.99□□□□□ -0.65
CLTC-204ENST00000472129 PUS10Q3MIT2 529 aaKnown RBP10.99□□□□□ -0.65
CLTC-204ENST00000472129 FUT2Q10981 343 aa10.98□□□□□ -0.65
CLTC-204ENST00000472129 PPP1R18Q6NYC8 613 aa10.98□□□□□ -0.65
CLTC-204ENST00000472129 PRKD2Q9BZL6 878 aa10.98□□□□□ -0.65
CLTC-204ENST00000472129 LAPTM4AQ15012 233 aa10.97□□□□□ -0.65
CLTC-204ENST00000472129 GFRA3O60609 400 aa10.96□□□□□ -0.65
CLTC-204ENST00000472129 MS4A1P11836 297 aa10.96□□□□□ -0.65
CLTC-204ENST00000472129 PRKCSHP14314 528 aaPredicted RBP10.96□□□□□ -0.65
CLTC-204ENST00000472129 NKX2-3Q8TAU0 364 aa10.94□□□□□ -0.66
CLTC-204ENST00000472129 KDM4AO75164 1064 aa10.93□□□□□ -0.66
CLTC-204ENST00000472129 ZPR1O75312 459 aa10.93□□□□□ -0.66
CLTC-204ENST00000472129 ATP6V1AP38606 617 aa10.93□□□□□ -0.66
CLTC-204ENST00000472129 MORN1Q5T089 497 aa10.92□□□□□ -0.66
CLTC-204ENST00000472129 SCUBE3Q8IX30 993 aa10.92□□□□□ -0.66
CLTC-204ENST00000472129 HLA-CQ95604 372 aa10.92□□□□□ -0.66
CLTC-204ENST00000472129 GPBP1L1Q9HC44 474 aaPredicted RBP10.92□□□□□ -0.66
CLTC-204ENST00000472129 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.92□□□□□ -0.66
CLTC-204ENST00000472129 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
CLTC-204ENST00000472129 V9GY48 417 aaPredicted RBP10.91□□□□□ -0.66
CLTC-204ENST00000472129 TLL1O43897 1013 aa10.9□□□□□ -0.66
CLTC-204ENST00000472129 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
CLTC-204ENST00000472129 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
CLTC-204ENST00000472129 NR1I2O75469 434 aa10.89□□□□□ -0.67
CLTC-204ENST00000472129 NRG2O14511 850 aaPredicted RBP10.88□□□□□ -0.67
CLTC-204ENST00000472129 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
CLTC-204ENST00000472129 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
CLTC-204ENST00000472129 HOXA2O43364 376 aa10.87□□□□□ -0.67
CLTC-204ENST00000472129 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
CLTC-204ENST00000472129 KDM4CQ9H3R0 1056 aa10.86□□□□□ -0.67
CLTC-204ENST00000472129 USP46P62068 366 aa10.85□□□□□ -0.67
CLTC-204ENST00000472129 GRIPAP1Q4V328 841 aa10.85□□□□□ -0.67
CLTC-204ENST00000472129 THAP11Q96EK4 314 aa10.84□□□□□ -0.67
CLTC-204ENST00000472129 NDUFV2P19404 249 aa10.83□□□□□ -0.68
CLTC-204ENST00000472129 RNF19BQ6ZMZ0 732 aa10.83□□□□□ -0.68
CLTC-204ENST00000472129 TBC1D2Q9BYX2 928 aa10.83□□□□□ -0.68
CLTC-204ENST00000472129 MOXD2PA6NHM9 499 aa10.82□□□□□ -0.68
CLTC-204ENST00000472129 SPSB2Q99619 263 aa10.82□□□□□ -0.68
CLTC-204ENST00000472129 ADH1BP00325 375 aa10.81□□□□□ -0.68
CLTC-204ENST00000472129 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
CLTC-204ENST00000472129 BRICD5Q6PL45 260 aa10.81□□□□□ -0.68
CLTC-204ENST00000472129 FAM117AQ9C073 453 aa10.81□□□□□ -0.68
CLTC-204ENST00000472129 GGCXP38435 758 aa10.8□□□□□ -0.68
CLTC-204ENST00000472129 PCDHGC3Q9UN70 934 aa10.8□□□□□ -0.68
CLTC-204ENST00000472129 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms