RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 NUTM2DQ5VT03 806 aaPredicted RBP21.35■■□□□ 1.01
SMARCD3-207ENST00000472103 STRCQ7RTU9 1775 aa21.35■■□□□ 1.01
SMARCD3-207ENST00000472103 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
SMARCD3-207ENST00000472103 IFT172Q9UG01 1749 aa21.33■■□□□ 1.01
SMARCD3-207ENST00000472103 PPLO60437 1756 aa21.33■■□□□ 1
SMARCD3-207ENST00000472103 POLR1AO95602 1720 aaPredicted RBP21.31■■□□□ 1
SMARCD3-207ENST00000472103 TXNDC2Q86VQ3 553 aa21.3■■□□□ 1
SMARCD3-207ENST00000472103 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
SMARCD3-207ENST00000472103 SCAF11Q99590 1463 aaKnown RBP21.29■■□□□ 1
SMARCD3-207ENST00000472103 SENP3Q9H4L4 574 aaPredicted RBP21.29■■□□□ 1
SMARCD3-207ENST00000472103 ANKLE2Q86XL3 938 aa21.28■■□□□ 1
SMARCD3-207ENST00000472103 RPGRIP1LQ68CZ1 1315 aa21.27■□□□□ 0.99
SMARCD3-207ENST00000472103 ADGRF5Q8IZF2 1346 aa21.26■□□□□ 0.99
SMARCD3-207ENST00000472103 L3MBTL2Q969R5 705 aa21.25■□□□□ 0.99
SMARCD3-207ENST00000472103 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
SMARCD3-207ENST00000472103 MED14O60244 1454 aa21.24■□□□□ 0.99
SMARCD3-207ENST00000472103 NPHP4O75161 1426 aaPredicted RBP21.23■□□□□ 0.99
SMARCD3-207ENST00000472103 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMARCD3-207ENST00000472103 DCAF11Q8TEB1 546 aa21.23■□□□□ 0.99
SMARCD3-207ENST00000472103 KDM2AQ9Y2K7 1162 aa21.23■□□□□ 0.99
SMARCD3-207ENST00000472103 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
SMARCD3-207ENST00000472103 PLEKHG1Q9ULL1 1385 aa21.22■□□□□ 0.99
SMARCD3-207ENST00000472103 NRXN3Q9Y4C0 1643 aa21.22■□□□□ 0.99
SMARCD3-207ENST00000472103 IQGAP1P46940 1657 aa21.21■□□□□ 0.99
SMARCD3-207ENST00000472103 MYOM2P54296 1465 aa21.21■□□□□ 0.99
SMARCD3-207ENST00000472103 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.98
SMARCD3-207ENST00000472103 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
SMARCD3-207ENST00000472103 TONSLQ96HA7 1378 aa21.19■□□□□ 0.98
SMARCD3-207ENST00000472103 ADAMTS13Q76LX8 1427 aa21.19■□□□□ 0.98
SMARCD3-207ENST00000472103 NRXN1Q9ULB1 1477 aa21.19■□□□□ 0.98
SMARCD3-207ENST00000472103 SETBP1Q9Y6X0 1596 aa21.17■□□□□ 0.98
SMARCD3-207ENST00000472103 PIK3C2GO75747 1445 aa21.16■□□□□ 0.98
SMARCD3-207ENST00000472103 SLC26A8Q96RN1 970 aa21.15■□□□□ 0.98
SMARCD3-207ENST00000472103 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
SMARCD3-207ENST00000472103 BCANQ96GW7 911 aa21.14■□□□□ 0.97
SMARCD3-207ENST00000472103 ALKQ9UM73 1620 aa21.13■□□□□ 0.97
SMARCD3-207ENST00000472103 NBPF8Q3BBV2 869 aa21.12■□□□□ 0.97
SMARCD3-207ENST00000472103 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
SMARCD3-207ENST00000472103 CFAP70Q5T0N1 1121 aa21.11■□□□□ 0.97
SMARCD3-207ENST00000472103 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
SMARCD3-207ENST00000472103 STAC3Q96MF2 364 aa21.09■□□□□ 0.97
SMARCD3-207ENST00000472103 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
SMARCD3-207ENST00000472103 METP08581 1390 aa21.09■□□□□ 0.97
SMARCD3-207ENST00000472103 DIP2AQ14689 1571 aa21.08■□□□□ 0.97
SMARCD3-207ENST00000472103 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.97
SMARCD3-207ENST00000472103 DMRT2Q9Y5R5 561 aa21.08■□□□□ 0.97
SMARCD3-207ENST00000472103 PTPRUQ92729 1446 aa21.07■□□□□ 0.96
SMARCD3-207ENST00000472103 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
SMARCD3-207ENST00000472103 STRCP1A6NGW2 1772 aa21.07■□□□□ 0.96
SMARCD3-207ENST00000472103 ZNF335Q9H4Z2 1342 aaPredicted RBP21.04■□□□□ 0.96
SMARCD3-207ENST00000472103 TRPM1Q7Z4N2 1603 aa21.04■□□□□ 0.96
SMARCD3-207ENST00000472103 NBPF1Q3BBV0 1214 aa21.04■□□□□ 0.96
SMARCD3-207ENST00000472103 TMEM132EQ6IEE7 984 aa21.04■□□□□ 0.96
SMARCD3-207ENST00000472103 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
SMARCD3-207ENST00000472103 LAMC1P11047 1609 aa21.04■□□□□ 0.96
SMARCD3-207ENST00000472103 ADGRB1O14514 1584 aa21.03■□□□□ 0.96
SMARCD3-207ENST00000472103 KIAA1210Q9ULL0 1709 aa21.03■□□□□ 0.96
SMARCD3-207ENST00000472103 NWD1Q149M9 1564 aa21■□□□□ 0.95
SMARCD3-207ENST00000472103 XRN1Q8IZH2 1706 aaKnown RBP20.99■□□□□ 0.95
SMARCD3-207ENST00000472103 PIK3R4Q99570 1358 aa20.98■□□□□ 0.95
SMARCD3-207ENST00000472103 LTBP4Q8N2S1 1624 aa20.97■□□□□ 0.95
SMARCD3-207ENST00000472103 KCNA6P17658 529 aa20.97■□□□□ 0.95
SMARCD3-207ENST00000472103 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
SMARCD3-207ENST00000472103 RALGAPBQ86X10 1494 aa20.96■□□□□ 0.95
SMARCD3-207ENST00000472103 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.95
SMARCD3-207ENST00000472103 STK26Q9P289 416 aa20.95■□□□□ 0.94
SMARCD3-207ENST00000472103 LRPPRCP42704 1394 aaKnown RBP20.95■□□□□ 0.94
SMARCD3-207ENST00000472103 KNDC1Q76NI1 1749 aa20.93■□□□□ 0.94
SMARCD3-207ENST00000472103 ROCK2O75116 1388 aaKnown RBP20.93■□□□□ 0.94
SMARCD3-207ENST00000472103 RBM33Q96EV2 1170 aaKnown RBP20.92■□□□□ 0.94
SMARCD3-207ENST00000472103 GPRASP1Q5JY77 1395 aa20.92■□□□□ 0.94
SMARCD3-207ENST00000472103 ROBO2Q9HCK4 1378 aa20.92■□□□□ 0.94
SMARCD3-207ENST00000472103 ABCC11Q96J66 1382 aa20.91■□□□□ 0.94
SMARCD3-207ENST00000472103 TRAK1Q9UPV9 953 aa20.91■□□□□ 0.94
SMARCD3-207ENST00000472103 CPS1P31327 1500 aa20.9■□□□□ 0.94
SMARCD3-207ENST00000472103 TECPR2O15040 1411 aa20.9■□□□□ 0.94
SMARCD3-207ENST00000472103 XIRP1Q702N8 1843 aaKnown RBP20.9■□□□□ 0.94
SMARCD3-207ENST00000472103 LRRC7Q96NW7 1537 aa20.89■□□□□ 0.94
SMARCD3-207ENST00000472103 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.94
SMARCD3-207ENST00000472103 PLEKHH1Q9ULM0 1364 aa20.89■□□□□ 0.93
SMARCD3-207ENST00000472103 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.93
SMARCD3-207ENST00000472103 PTCH1Q13635 1447 aa20.87■□□□□ 0.93
SMARCD3-207ENST00000472103 WAPLQ7Z5K2 1190 aa20.87■□□□□ 0.93
SMARCD3-207ENST00000472103 DLC1Q96QB1 1528 aa20.87■□□□□ 0.93
SMARCD3-207ENST00000472103 PROSER2Q86WR7 435 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-207ENST00000472103 CARD11Q9BXL7 1154 aa20.86■□□□□ 0.93
SMARCD3-207ENST00000472103 TMEM94Q12767 1356 aa20.85■□□□□ 0.93
SMARCD3-207ENST00000472103 PRAM1Q96QH2 718 aa20.83■□□□□ 0.93
SMARCD3-207ENST00000472103 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.83■□□□□ 0.92
SMARCD3-207ENST00000472103 SIRT1Q96EB6 747 aa20.82■□□□□ 0.92
SMARCD3-207ENST00000472103 FAM135BQ49AJ0 1406 aa20.81■□□□□ 0.92
SMARCD3-207ENST00000472103 SAFB2Q14151 953 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMARCD3-207ENST00000472103 NALCNQ8IZF0 1738 aa20.81■□□□□ 0.92
SMARCD3-207ENST00000472103 POGKQ9P215 609 aa20.77■□□□□ 0.92
SMARCD3-207ENST00000472103 QRICH2Q9H0J4 1663 aa20.77■□□□□ 0.91
SMARCD3-207ENST00000472103 USP47Q96K76 1375 aa20.76■□□□□ 0.91
SMARCD3-207ENST00000472103 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
SMARCD3-207ENST00000472103 CERKQ8TCT0 537 aa20.76■□□□□ 0.91
SMARCD3-207ENST00000472103 ADGRL3Q9HAR2 1447 aa20.75■□□□□ 0.91
SMARCD3-207ENST00000472103 NCOA3Q9Y6Q9 1424 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms