RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 PKD2Q13563 968 aa14.42□□□□□ -0.1
GGPS1-204ENST00000471812 IDI1Q13907 227 aa14.42□□□□□ -0.1
GGPS1-204ENST00000471812 FBXO41Q8TF61 875 aa14.41□□□□□ -0.1
GGPS1-204ENST00000471812 ARHGAP23Q9P227 1491 aa14.41□□□□□ -0.1
GGPS1-204ENST00000471812 NUP155O75694 1391 aa14.39□□□□□ -0.11
GGPS1-204ENST00000471812 THEMISQ8N1K5 641 aaPredicted RBP14.39□□□□□ -0.11
GGPS1-204ENST00000471812 ADGRB3O60242 1522 aa14.39□□□□□ -0.11
GGPS1-204ENST00000471812 SLIT1O75093 1534 aa14.39□□□□□ -0.11
GGPS1-204ENST00000471812 NPHP4O75161 1426 aaPredicted RBP14.39□□□□□ -0.11
GGPS1-204ENST00000471812 MED14O60244 1454 aa14.38□□□□□ -0.11
GGPS1-204ENST00000471812 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
GGPS1-204ENST00000471812 SCAF11Q99590 1463 aaKnown RBP14.37□□□□□ -0.11
GGPS1-204ENST00000471812 TMEM131LA2VDJ0 1609 aa14.37□□□□□ -0.11
GGPS1-204ENST00000471812 RPRD2Q5VT52 1461 aaKnown RBP14.36□□□□□ -0.11
GGPS1-204ENST00000471812 KDM5AP29375 1690 aaKnown RBP14.36□□□□□ -0.11
GGPS1-204ENST00000471812 SPHKAPQ2M3C7 1700 aa14.35□□□□□ -0.11
GGPS1-204ENST00000471812 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
GGPS1-204ENST00000471812 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
GGPS1-204ENST00000471812 HFM1A2PYH4 1435 aa14.34□□□□□ -0.11
GGPS1-204ENST00000471812 TXNDC2Q86VQ3 553 aa14.33□□□□□ -0.12
GGPS1-204ENST00000471812 XIRP1Q702N8 1843 aaKnown RBP14.33□□□□□ -0.12
GGPS1-204ENST00000471812 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
GGPS1-204ENST00000471812 ALKQ9UM73 1620 aa14.32□□□□□ -0.12
GGPS1-204ENST00000471812 ZFYVE9O95405 1425 aa14.32□□□□□ -0.12
GGPS1-204ENST00000471812 NUTM2DQ5VT03 806 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-204ENST00000471812 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
GGPS1-204ENST00000471812 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
GGPS1-204ENST00000471812 CHGAP10645 457 aaKnown RBP14.28□□□□□ -0.12
GGPS1-204ENST00000471812 RIMS2Q9UQ26 1411 aa14.28□□□□□ -0.12
GGPS1-204ENST00000471812 LRRC7Q96NW7 1537 aa14.27□□□□□ -0.12
GGPS1-204ENST00000471812 ABCB7O75027 752 aa14.27□□□□□ -0.13
GGPS1-204ENST00000471812 SLC26A8Q96RN1 970 aa14.27□□□□□ -0.13
GGPS1-204ENST00000471812 SLC52A1Q9NWF4 448 aa14.27□□□□□ -0.13
GGPS1-204ENST00000471812 TRIM52Q96A61 297 aa14.26□□□□□ -0.13
GGPS1-204ENST00000471812 CPS1P31327 1500 aa14.25□□□□□ -0.13
GGPS1-204ENST00000471812 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
GGPS1-204ENST00000471812 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
GGPS1-204ENST00000471812 TRPM2O94759 1503 aa14.25□□□□□ -0.13
GGPS1-204ENST00000471812 NRXN3Q9Y4C0 1643 aa14.24□□□□□ -0.13
GGPS1-204ENST00000471812 UBAP1LF5GYI3 381 aa14.23□□□□□ -0.13
GGPS1-204ENST00000471812 EID1Q9Y6B2 187 aa14.23□□□□□ -0.13
GGPS1-204ENST00000471812 FKBP8Q14318 412 aa14.22□□□□□ -0.13
GGPS1-204ENST00000471812 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
GGPS1-204ENST00000471812 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
GGPS1-204ENST00000471812 KIF1BO60333 1816 aa14.22□□□□□ -0.13
GGPS1-204ENST00000471812 NWD1Q149M9 1564 aa14.21□□□□□ -0.14
GGPS1-204ENST00000471812 NEXMIFQ5QGS0 1516 aa14.2□□□□□ -0.14
GGPS1-204ENST00000471812 PLEKHG1Q9ULL1 1385 aa14.2□□□□□ -0.14
GGPS1-204ENST00000471812 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
GGPS1-204ENST00000471812 PIP4K2BP78356 416 aa14.18□□□□□ -0.14
GGPS1-204ENST00000471812 RAB3GAP2Q9H2M9 1393 aa14.18□□□□□ -0.14
GGPS1-204ENST00000471812 PTPRUQ92729 1446 aa14.17□□□□□ -0.14
GGPS1-204ENST00000471812 PPP1R15AO75807 674 aaPredicted RBP14.17□□□□□ -0.14
GGPS1-204ENST00000471812 BCANQ96GW7 911 aa14.17□□□□□ -0.14
GGPS1-204ENST00000471812 PPLO60437 1756 aa14.16□□□□□ -0.14
GGPS1-204ENST00000471812 SETD1AO15047 1707 aaKnown RBP14.15□□□□□ -0.14
GGPS1-204ENST00000471812 TMEM94Q12767 1356 aa14.15□□□□□ -0.14
GGPS1-204ENST00000471812 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
GGPS1-204ENST00000471812 KCNA6P17658 529 aa14.14□□□□□ -0.15
GGPS1-204ENST00000471812 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
GGPS1-204ENST00000471812 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
GGPS1-204ENST00000471812 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
GGPS1-204ENST00000471812 HSPA1LP34931 641 aa14.12□□□□□ -0.15
GGPS1-204ENST00000471812 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
GGPS1-204ENST00000471812 METP08581 1390 aa14.11□□□□□ -0.15
GGPS1-204ENST00000471812 DIP2AQ14689 1571 aa14.11□□□□□ -0.15
GGPS1-204ENST00000471812 PROSER2Q86WR7 435 aaPredicted RBP14.11□□□□□ -0.15
GGPS1-204ENST00000471812 NKTRP30414 1462 aaKnown RBP14.11□□□□□ -0.15
GGPS1-204ENST00000471812 SPATA31E1Q6ZUB1 1445 aa14.1□□□□□ -0.15
GGPS1-204ENST00000471812 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.1□□□□□ -0.15
GGPS1-204ENST00000471812 TBX22Q9Y458 520 aa14.1□□□□□ -0.15
GGPS1-204ENST00000471812 POTEHQ6S545 545 aa14.08□□□□□ -0.16
GGPS1-204ENST00000471812 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.07□□□□□ -0.16
GGPS1-204ENST00000471812 TOM1O60784 492 aa14.07□□□□□ -0.16
GGPS1-204ENST00000471812 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
GGPS1-204ENST00000471812 AMOTL2Q9Y2J4 779 aa14.06□□□□□ -0.16
GGPS1-204ENST00000471812 ROBO1Q9Y6N7 1651 aa14.06□□□□□ -0.16
GGPS1-204ENST00000471812 ADGRF5Q8IZF2 1346 aa14.06□□□□□ -0.16
GGPS1-204ENST00000471812 ASXL1Q8IXJ9 1541 aa14.05□□□□□ -0.16
GGPS1-204ENST00000471812 CCDC144AA2RUR9 1427 aa14.05□□□□□ -0.16
GGPS1-204ENST00000471812 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
GGPS1-204ENST00000471812 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
GGPS1-204ENST00000471812 ANKRD30BQ9BXX2 1392 aa14.02□□□□□ -0.17
GGPS1-204ENST00000471812 PIK3R4Q99570 1358 aa14.01□□□□□ -0.17
GGPS1-204ENST00000471812 ILDR2Q71H61 639 aa14□□□□□ -0.17
GGPS1-204ENST00000471812 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
GGPS1-204ENST00000471812 MSH6P52701 1360 aa13.99□□□□□ -0.17
GGPS1-204ENST00000471812 ROBO2Q9HCK4 1378 aa13.99□□□□□ -0.17
GGPS1-204ENST00000471812 DISP3Q9P2K9 1392 aa13.99□□□□□ -0.17
GGPS1-204ENST00000471812 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
GGPS1-204ENST00000471812 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
GGPS1-204ENST00000471812 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
GGPS1-204ENST00000471812 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
GGPS1-204ENST00000471812 PHLPP1O60346 1717 aa13.96□□□□□ -0.17
GGPS1-204ENST00000471812 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
GGPS1-204ENST00000471812 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
GGPS1-204ENST00000471812 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
GGPS1-204ENST00000471812 SLAIN2Q9P270 581 aa13.95□□□□□ -0.18
GGPS1-204ENST00000471812 PLEKHH1Q9ULM0 1364 aa13.95□□□□□ -0.18
GGPS1-204ENST00000471812 COL16A1Q07092 1604 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms