RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 PXYLP1Q8TE99 480 aa12.24□□□□□ -0.45
GTF2B-204ENST00000471296 MTRQ99707 1265 aa12.24□□□□□ -0.45
GTF2B-204ENST00000471296 METTL3Q86U44 580 aaKnown RBP12.21□□□□□ -0.45
GTF2B-204ENST00000471296 OATP04181 439 aa12.2□□□□□ -0.46
GTF2B-204ENST00000471296 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
GTF2B-204ENST00000471296 ZNF516Q92618 1163 aa12.2□□□□□ -0.46
GTF2B-204ENST00000471296 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
GTF2B-204ENST00000471296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
GTF2B-204ENST00000471296 COPS2P61201 443 aa12.17□□□□□ -0.46
GTF2B-204ENST00000471296 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
GTF2B-204ENST00000471296 IL21Q9HBE4 155 aa12.17□□□□□ -0.46
GTF2B-204ENST00000471296 SLC10A3P09131 477 aa12.15□□□□□ -0.46
GTF2B-204ENST00000471296 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
GTF2B-204ENST00000471296 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
GTF2B-204ENST00000471296 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
GTF2B-204ENST00000471296 CFHP08603 1231 aa12.12□□□□□ -0.47
GTF2B-204ENST00000471296 BLOC1S3Q6QNY0 202 aa12.11□□□□□ -0.47
GTF2B-204ENST00000471296 PCDHB3Q9Y5E6 796 aa12.11□□□□□ -0.47
GTF2B-204ENST00000471296 RGS20O76081 388 aa12.1□□□□□ -0.47
GTF2B-204ENST00000471296 PRR14Q9BWN1 585 aa12.09□□□□□ -0.47
GTF2B-204ENST00000471296 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.08□□□□□ -0.48
GTF2B-204ENST00000471296 ZPR1O75312 459 aa12.07□□□□□ -0.48
GTF2B-204ENST00000471296 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
GTF2B-204ENST00000471296 PPP1R18Q6NYC8 613 aa12.07□□□□□ -0.48
GTF2B-204ENST00000471296 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
GTF2B-204ENST00000471296 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
GTF2B-204ENST00000471296 ZCCHC6Q5VYS8 1495 aaKnown RBP12.04□□□□□ -0.48
GTF2B-204ENST00000471296 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
GTF2B-204ENST00000471296 TLL1O43897 1013 aa12.04□□□□□ -0.48
GTF2B-204ENST00000471296 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
GTF2B-204ENST00000471296 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
GTF2B-204ENST00000471296 MYO15BQ96JP2 1530 aa12.04□□□□□ -0.48
GTF2B-204ENST00000471296 NACADO15069 1562 aa12.04□□□□□ -0.48
GTF2B-204ENST00000471296 RB1CC1Q8TDY2 1594 aa12.03□□□□□ -0.48
GTF2B-204ENST00000471296 IRF6O14896 467 aa12.02□□□□□ -0.49
GTF2B-204ENST00000471296 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
GTF2B-204ENST00000471296 PUS10Q3MIT2 529 aaKnown RBP12.01□□□□□ -0.49
GTF2B-204ENST00000471296 RSPH4AQ5TD94 716 aa12□□□□□ -0.49
GTF2B-204ENST00000471296 EIF4ENIF1Q9NRA8 985 aaKnown RBP12□□□□□ -0.49
GTF2B-204ENST00000471296 CCDC102AQ96A19 550 aa11.99□□□□□ -0.49
GTF2B-204ENST00000471296 DCAF1Q9Y4B6 1507 aa11.99□□□□□ -0.49
GTF2B-204ENST00000471296 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
GTF2B-204ENST00000471296 IRX2Q9BZI1 471 aaPredicted RBP11.96□□□□□ -0.49
GTF2B-204ENST00000471296 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
GTF2B-204ENST00000471296 FUT2Q10981 343 aa11.95□□□□□ -0.5
GTF2B-204ENST00000471296 PRKD2Q9BZL6 878 aa11.95□□□□□ -0.5
GTF2B-204ENST00000471296 NR1I2O75469 434 aa11.94□□□□□ -0.5
GTF2B-204ENST00000471296 GCGRP47871 477 aa11.94□□□□□ -0.5
GTF2B-204ENST00000471296 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
GTF2B-204ENST00000471296 SCUBE3Q8IX30 993 aa11.94□□□□□ -0.5
GTF2B-204ENST00000471296 GGCXP38435 758 aa11.92□□□□□ -0.5
GTF2B-204ENST00000471296 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
GTF2B-204ENST00000471296 PPEF1O14829 653 aaPredicted RBP11.91□□□□□ -0.5
GTF2B-204ENST00000471296 S1PR4O95977 384 aa11.91□□□□□ -0.5
GTF2B-204ENST00000471296 ADH1BP00325 375 aa11.9□□□□□ -0.5
GTF2B-204ENST00000471296 MORN1Q5T089 497 aa11.9□□□□□ -0.5
GTF2B-204ENST00000471296 ZC3H15Q8WU90 426 aaKnown RBP11.9□□□□□ -0.5
GTF2B-204ENST00000471296 KRI1Q8N9T8 703 aaKnown RBP11.89□□□□□ -0.51
GTF2B-204ENST00000471296 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
GTF2B-204ENST00000471296 ZMYND10O75800 440 aa11.88□□□□□ -0.51
GTF2B-204ENST00000471296 CD46P15529 392 aa11.88□□□□□ -0.51
GTF2B-204ENST00000471296 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
GTF2B-204ENST00000471296 BARGINQ6ZT62 677 aa11.87□□□□□ -0.51
GTF2B-204ENST00000471296 SLC27A5Q9Y2P5 690 aa11.87□□□□□ -0.51
GTF2B-204ENST00000471296 EMID1Q96A84 441 aaPredicted RBP11.86□□□□□ -0.51
GTF2B-204ENST00000471296 SPSB2Q99619 263 aa11.86□□□□□ -0.51
GTF2B-204ENST00000471296 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
GTF2B-204ENST00000471296 REPIN1Q9BWE0 567 aaKnown RBP11.85□□□□□ -0.51
GTF2B-204ENST00000471296 SLC6A16Q9GZN6 736 aa11.85□□□□□ -0.51
GTF2B-204ENST00000471296 THAP11Q96EK4 314 aa11.84□□□□□ -0.51
GTF2B-204ENST00000471296 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
GTF2B-204ENST00000471296 CLCN1P35523 988 aa11.82□□□□□ -0.52
GTF2B-204ENST00000471296 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
GTF2B-204ENST00000471296 ANKLE1Q8NAG6 615 aa11.81□□□□□ -0.52
GTF2B-204ENST00000471296 HLA-CQ95604 372 aa11.81□□□□□ -0.52
GTF2B-204ENST00000471296 KDM4AO75164 1064 aa11.8□□□□□ -0.52
GTF2B-204ENST00000471296 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
GTF2B-204ENST00000471296 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
GTF2B-204ENST00000471296 GFRA3O60609 400 aa11.79□□□□□ -0.52
GTF2B-204ENST00000471296 FMNL1O95466 1100 aaPredicted RBP11.79□□□□□ -0.52
GTF2B-204ENST00000471296 SLC19A1P41440 591 aa11.79□□□□□ -0.52
GTF2B-204ENST00000471296 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
GTF2B-204ENST00000471296 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
GTF2B-204ENST00000471296 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
GTF2B-204ENST00000471296 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
GTF2B-204ENST00000471296 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
GTF2B-204ENST00000471296 Q6ZNB5 142 aa11.77□□□□□ -0.53
GTF2B-204ENST00000471296 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
GTF2B-204ENST00000471296 TTLL12Q14166 644 aaPredicted RBP11.75□□□□□ -0.53
GTF2B-204ENST00000471296 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
GTF2B-204ENST00000471296 HOXA2O43364 376 aa11.73□□□□□ -0.53
GTF2B-204ENST00000471296 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
GTF2B-204ENST00000471296 AMHR2Q16671 573 aa11.73□□□□□ -0.53
GTF2B-204ENST00000471296 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
GTF2B-204ENST00000471296 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
GTF2B-204ENST00000471296 FCF1Q9Y324 198 aaKnown RBP11.72□□□□□ -0.53
GTF2B-204ENST00000471296 USP46P62068 366 aa11.71□□□□□ -0.53
GTF2B-204ENST00000471296 Q3C1V9 767 aa11.71□□□□□ -0.53
GTF2B-204ENST00000471296 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.53
GTF2B-204ENST00000471296 TRIM67Q6ZTA4 783 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms