RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
LAMP1-202ENST00000471046 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
LAMP1-202ENST00000471046 KANK1Q14678 1352 aa20.37■□□□□ 0.85
LAMP1-202ENST00000471046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
LAMP1-202ENST00000471046 DAPK1P53355 1430 aa20.36■□□□□ 0.85
LAMP1-202ENST00000471046 TMEM131LA2VDJ0 1609 aa20.36■□□□□ 0.85
LAMP1-202ENST00000471046 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
LAMP1-202ENST00000471046 ZFYVE9O95405 1425 aa20.36■□□□□ 0.85
LAMP1-202ENST00000471046 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
LAMP1-202ENST00000471046 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
LAMP1-202ENST00000471046 FGD6Q6ZV73 1430 aa20.34■□□□□ 0.85
LAMP1-202ENST00000471046 UPF1Q92900 1129 aaKnown RBP eCLIP20.33■□□□□ 0.85
LAMP1-202ENST00000471046 PLEKHG1Q9ULL1 1385 aa20.31■□□□□ 0.84
LAMP1-202ENST00000471046 SPATA31A6Q5VVP1 1343 aa20.28■□□□□ 0.84
LAMP1-202ENST00000471046 NHSL1Q5SYE7 1610 aa20.28■□□□□ 0.84
LAMP1-202ENST00000471046 TRIM52Q96A61 297 aa20.28■□□□□ 0.84
LAMP1-202ENST00000471046 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
LAMP1-202ENST00000471046 RPRD2Q5VT52 1461 aaKnown RBP20.27■□□□□ 0.84
LAMP1-202ENST00000471046 NCOA3Q9Y6Q9 1424 aa20.27■□□□□ 0.83
LAMP1-202ENST00000471046 CDK12Q9NYV4 1490 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-202ENST00000471046 E9PCH4 1651 aa20.25■□□□□ 0.83
LAMP1-202ENST00000471046 MEX3CQ5U5Q3 659 aaKnown RBP20.24■□□□□ 0.83
LAMP1-202ENST00000471046 ZNF772Q68DY9 489 aaPredicted RBP20.24■□□□□ 0.83
LAMP1-202ENST00000471046 BCANQ96GW7 911 aa20.24■□□□□ 0.83
LAMP1-202ENST00000471046 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
LAMP1-202ENST00000471046 ANKRD30AQ9BXX3 1397 aa20.23■□□□□ 0.83
LAMP1-202ENST00000471046 SRCAPQ6ZRS2 3230 aa20.23■□□□□ 0.83
LAMP1-202ENST00000471046 ADAMTS13Q76LX8 1427 aa20.23■□□□□ 0.83
LAMP1-202ENST00000471046 SLC52A1Q9NWF4 448 aa20.23■□□□□ 0.83
LAMP1-202ENST00000471046 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
LAMP1-202ENST00000471046 UNC13BO14795 1591 aa20.21■□□□□ 0.83
LAMP1-202ENST00000471046 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
LAMP1-202ENST00000471046 TRPM2O94759 1503 aa20.2■□□□□ 0.82
LAMP1-202ENST00000471046 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
LAMP1-202ENST00000471046 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
LAMP1-202ENST00000471046 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
LAMP1-202ENST00000471046 TBX22Q9Y458 520 aa20.17■□□□□ 0.82
LAMP1-202ENST00000471046 RGS12O14924 1447 aa20.17■□□□□ 0.82
LAMP1-202ENST00000471046 RXRBP28702 533 aa20.16■□□□□ 0.82
LAMP1-202ENST00000471046 PTPRUQ92729 1446 aa20.16■□□□□ 0.82
LAMP1-202ENST00000471046 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
LAMP1-202ENST00000471046 CADPS2Q86UW7 1296 aa20.15■□□□□ 0.82
LAMP1-202ENST00000471046 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
LAMP1-202ENST00000471046 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
LAMP1-202ENST00000471046 IQGAP3Q86VI3 1631 aa20.13■□□□□ 0.81
LAMP1-202ENST00000471046 DCCP43146 1447 aa20.13■□□□□ 0.81
LAMP1-202ENST00000471046 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
LAMP1-202ENST00000471046 AFF2P51816 1311 aa20.13■□□□□ 0.81
LAMP1-202ENST00000471046 BRINP3Q76B58 766 aa20.13■□□□□ 0.81
LAMP1-202ENST00000471046 C19orf44Q9H6X5 657 aa20.13■□□□□ 0.81
LAMP1-202ENST00000471046 ATF3P18847 181 aa20.12■□□□□ 0.81
LAMP1-202ENST00000471046 ANKRD50Q9ULJ7 1429 aa20.11■□□□□ 0.81
LAMP1-202ENST00000471046 NUTM2BA6NNL0 878 aaPredicted RBP20.11■□□□□ 0.81
LAMP1-202ENST00000471046 NUTM2EB1AL46 878 aaPredicted RBP20.11■□□□□ 0.81
LAMP1-202ENST00000471046 NUTM2AQ8IVF1 878 aaPredicted RBP20.11■□□□□ 0.81
LAMP1-202ENST00000471046 EP400Q96L91 3159 aa20.11■□□□□ 0.81
LAMP1-202ENST00000471046 MST1RQ04912 1400 aa20.1■□□□□ 0.81
LAMP1-202ENST00000471046 NUTM2DQ5VT03 806 aaPredicted RBP20.09■□□□□ 0.81
LAMP1-202ENST00000471046 SETBP1Q9Y6X0 1596 aa20.08■□□□□ 0.81
LAMP1-202ENST00000471046 HDGFP51858 240 aaKnown RBP20.08■□□□□ 0.81
LAMP1-202ENST00000471046 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.08■□□□□ 0.81
LAMP1-202ENST00000471046 LAMC1P11047 1609 aa20.08■□□□□ 0.8
LAMP1-202ENST00000471046 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
LAMP1-202ENST00000471046 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
LAMP1-202ENST00000471046 PNPLA6Q8IY17 1366 aa20.05■□□□□ 0.8
LAMP1-202ENST00000471046 CHGAP10645 457 aaKnown RBP20.04■□□□□ 0.8
LAMP1-202ENST00000471046 MARF1Q9Y4F3 1742 aaKnown RBP20.03■□□□□ 0.8
LAMP1-202ENST00000471046 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
LAMP1-202ENST00000471046 C8orf37Q96NL8 207 aa20.01■□□□□ 0.79
LAMP1-202ENST00000471046 RBM6P78332 1123 aaKnown RBP20■□□□□ 0.79
LAMP1-202ENST00000471046 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
LAMP1-202ENST00000471046 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
LAMP1-202ENST00000471046 QTRT2Q9H974 415 aaKnown RBP19.99■□□□□ 0.79
LAMP1-202ENST00000471046 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
LAMP1-202ENST00000471046 LRRC59Q96AG4 307 aaKnown RBP19.96■□□□□ 0.79
LAMP1-202ENST00000471046 NEXMIFQ5QGS0 1516 aa19.95■□□□□ 0.78
LAMP1-202ENST00000471046 METP08581 1390 aa19.95■□□□□ 0.78
LAMP1-202ENST00000471046 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
LAMP1-202ENST00000471046 APLP2Q06481 763 aa19.94■□□□□ 0.78
LAMP1-202ENST00000471046 KIF1BO60333 1816 aa19.94■□□□□ 0.78
LAMP1-202ENST00000471046 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
LAMP1-202ENST00000471046 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
LAMP1-202ENST00000471046 C1orf167Q5SNV9 1468 aa19.92■□□□□ 0.78
LAMP1-202ENST00000471046 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.91■□□□□ 0.78
LAMP1-202ENST00000471046 ATRNO75882 1429 aa19.9■□□□□ 0.78
LAMP1-202ENST00000471046 BRWD3Q6RI45 1802 aa19.9■□□□□ 0.78
LAMP1-202ENST00000471046 ADAMTS2O95450 1211 aa19.89■□□□□ 0.77
LAMP1-202ENST00000471046 NGLY1Q96IV0 654 aa19.88■□□□□ 0.77
LAMP1-202ENST00000471046 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
LAMP1-202ENST00000471046 ROCK1Q13464 1354 aa19.86■□□□□ 0.77
LAMP1-202ENST00000471046 MYOM2P54296 1465 aa19.85■□□□□ 0.77
LAMP1-202ENST00000471046 SOS2Q07890 1332 aaPredicted RBP19.84■□□□□ 0.77
LAMP1-202ENST00000471046 USP21Q9UK80 565 aa19.84■□□□□ 0.77
LAMP1-202ENST00000471046 NUP155O75694 1391 aa19.83■□□□□ 0.77
LAMP1-202ENST00000471046 TRPC5Q9UL62 973 aaPredicted RBP19.83■□□□□ 0.77
LAMP1-202ENST00000471046 ZRANB1Q9UGI0 708 aa19.82■□□□□ 0.76
LAMP1-202ENST00000471046 PPLO60437 1756 aa19.82■□□□□ 0.76
LAMP1-202ENST00000471046 LRP5O75197 1615 aa19.81■□□□□ 0.76
LAMP1-202ENST00000471046 FNBP4Q8N3X1 1017 aaPredicted RBP19.81■□□□□ 0.76
LAMP1-202ENST00000471046 GLI3P10071 1580 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms