RNA–Protein interactions for RNA: ENST00000471030.1

LSMEM1-204, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-204ENST00000471030 NCOA1Q15788 1441 aa8.79□□□□□ -1
LSMEM1-204ENST00000471030 ANKRD30BQ9BXX2 1392 aa8.78□□□□□ -1
LSMEM1-204ENST00000471030 PDE4AP27815 886 aa8.78□□□□□ -1
LSMEM1-204ENST00000471030 DDX10Q13206 875 aaKnown RBP8.78□□□□□ -1
LSMEM1-204ENST00000471030 PTPRGP23470 1445 aa8.78□□□□□ -1
LSMEM1-204ENST00000471030 CAMSAP2Q08AD1 1489 aa8.77□□□□□ -1
LSMEM1-204ENST00000471030 RPRD2Q5VT52 1461 aaKnown RBP8.77□□□□□ -1
LSMEM1-204ENST00000471030 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
LSMEM1-204ENST00000471030 PRG4Q92954 1404 aaPredicted RBP8.77□□□□□ -1.01
LSMEM1-204ENST00000471030 ABCA8O94911 1581 aa8.77□□□□□ -1.01
LSMEM1-204ENST00000471030 ARID4BQ4LE39 1312 aaPredicted RBP8.77□□□□□ -1.01
LSMEM1-204ENST00000471030 PLB1Q6P1J6 1458 aa8.77□□□□□ -1.01
LSMEM1-204ENST00000471030 KIF14Q15058 1648 aa8.76□□□□□ -1.01
LSMEM1-204ENST00000471030 GPHNQ9NQX3 736 aaPredicted RBP8.76□□□□□ -1.01
LSMEM1-204ENST00000471030 PLEKHH2Q8IVE3 1493 aa8.75□□□□□ -1.01
LSMEM1-204ENST00000471030 KIAA1107Q9UPP5 1409 aa8.74□□□□□ -1.01
LSMEM1-204ENST00000471030 C2orf72A6NCS6 295 aa8.74□□□□□ -1.01
LSMEM1-204ENST00000471030 ZSWIM6Q9HCJ5 1215 aa8.74□□□□□ -1.01
LSMEM1-204ENST00000471030 ATP10BO94823 1461 aa8.74□□□□□ -1.01
LSMEM1-204ENST00000471030 ANKRD50Q9ULJ7 1429 aa8.73□□□□□ -1.01
LSMEM1-204ENST00000471030 ABCC10Q5T3U5 1492 aa8.73□□□□□ -1.01
LSMEM1-204ENST00000471030 KIF3CO14782 793 aa8.73□□□□□ -1.01
LSMEM1-204ENST00000471030 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
LSMEM1-204ENST00000471030 ARID3CA6NKF2 412 aa8.72□□□□□ -1.01
LSMEM1-204ENST00000471030 FOXK1P85037 733 aa8.72□□□□□ -1.01
LSMEM1-204ENST00000471030 TMEM92Q6UXU6 159 aa8.72□□□□□ -1.01
LSMEM1-204ENST00000471030 L3MBTL2Q969R5 705 aa8.72□□□□□ -1.01
LSMEM1-204ENST00000471030 ARHGEF5Q12774 1597 aa8.72□□□□□ -1.01
LSMEM1-204ENST00000471030 ADGBQ8N7X0 1667 aa8.72□□□□□ -1.01
LSMEM1-204ENST00000471030 C9orf84Q5VXU9 1444 aa8.71□□□□□ -1.01
LSMEM1-204ENST00000471030 KDM5BQ9UGL1 1544 aa8.71□□□□□ -1.01
LSMEM1-204ENST00000471030 NEFLP07196 543 aa8.71□□□□□ -1.02
LSMEM1-204ENST00000471030 HSPA5P11021 654 aaKnown RBP8.71□□□□□ -1.02
LSMEM1-204ENST00000471030 ZNF644Q9H582 1327 aaPredicted RBP8.71□□□□□ -1.02
LSMEM1-204ENST00000471030 DENND4BO75064 1496 aaPredicted RBP8.7□□□□□ -1.02
LSMEM1-204ENST00000471030 DDX27Q96GQ7 796 aaKnown RBP8.7□□□□□ -1.02
LSMEM1-204ENST00000471030 CRISPLD2Q9H0B8 497 aa8.7□□□□□ -1.02
LSMEM1-204ENST00000471030 ZNF777Q9ULD5 760 aaPredicted RBP8.7□□□□□ -1.02
LSMEM1-204ENST00000471030 KDM5DQ9BY66 1539 aa8.7□□□□□ -1.02
LSMEM1-204ENST00000471030 TBC1D12O60347 775 aa8.69□□□□□ -1.02
LSMEM1-204ENST00000471030 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
LSMEM1-204ENST00000471030 ROCK2O75116 1388 aaKnown RBP8.69□□□□□ -1.02
LSMEM1-204ENST00000471030 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
LSMEM1-204ENST00000471030 TEX14Q8IWB6 1497 aa8.69□□□□□ -1.02
LSMEM1-204ENST00000471030 ARHGEF12Q9NZN5 1544 aa8.69□□□□□ -1.02
LSMEM1-204ENST00000471030 SLC34A2O95436 690 aa8.68□□□□□ -1.02
LSMEM1-204ENST00000471030 LARP6Q9BRS8 491 aaKnown RBP8.68□□□□□ -1.02
LSMEM1-204ENST00000471030 WDR70Q9NW82 654 aa8.68□□□□□ -1.02
LSMEM1-204ENST00000471030 NUP155O75694 1391 aa8.68□□□□□ -1.02
LSMEM1-204ENST00000471030 CNTLNQ9NXG0 1405 aa8.68□□□□□ -1.02
LSMEM1-204ENST00000471030 PZPP20742 1482 aa8.68□□□□□ -1.02
LSMEM1-204ENST00000471030 CROCC2H7BZ55 1655 aa8.68□□□□□ -1.02
LSMEM1-204ENST00000471030 UHRF1BP1LA0JNW5 1464 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 MYT1Q01538 1121 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 PPP1R15BQ5SWA1 713 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 ERICH6BQ5W0A0 696 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 UHRF1BP1Q6BDS2 1440 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 PLPP6Q8IY26 295 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 STAC3Q96MF2 364 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 KIF15Q9NS87 1388 aa8.67□□□□□ -1.02
LSMEM1-204ENST00000471030 CCDC7Q96M83 1385 aa8.66□□□□□ -1.02
LSMEM1-204ENST00000471030 WASHC2AQ641Q2 1341 aa8.66□□□□□ -1.02
LSMEM1-204ENST00000471030 POTEMA6NI47 508 aa8.66□□□□□ -1.02
LSMEM1-204ENST00000471030 KDM6BO15054 1643 aa8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 ABCC2Q92887 1545 aa8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 MBD5Q9P267 1494 aa8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 SPATA31E1Q6ZUB1 1445 aa8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 KTN1Q86UP2 1357 aaKnown RBP8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 ST18O60284 1047 aa8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 HOXB3P14651 431 aaPredicted RBP8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 DSG2Q14126 1118 aa8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 SUPT16HQ9Y5B9 1047 aaKnown RBP8.65□□□□□ -1.02
LSMEM1-204ENST00000471030 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
LSMEM1-204ENST00000471030 MFSD10Q14728 455 aa8.64□□□□□ -1.03
LSMEM1-204ENST00000471030 EFCAB2Q5VUJ9 269 aa8.64□□□□□ -1.03
LSMEM1-204ENST00000471030 MAST1Q9Y2H9 1570 aa8.64□□□□□ -1.03
LSMEM1-204ENST00000471030 HOXB1P14653 301 aaPredicted RBP8.63□□□□□ -1.03
LSMEM1-204ENST00000471030 PREX2Q70Z35 1606 aa8.62□□□□□ -1.03
LSMEM1-204ENST00000471030 EMP3P54852 163 aa8.62□□□□□ -1.03
LSMEM1-204ENST00000471030 HIRIP3Q9BW71 556 aaPredicted RBP8.62□□□□□ -1.03
LSMEM1-204ENST00000471030 ARAP3Q8WWN8 1544 aa8.62□□□□□ -1.03
LSMEM1-204ENST00000471030 CDC42BPAQ5VT25 1732 aa8.62□□□□□ -1.03
LSMEM1-204ENST00000471030 PLCH2O75038 1416 aa8.62□□□□□ -1.03
LSMEM1-204ENST00000471030 ERBINQ96RT1 1412 aa8.62□□□□□ -1.03
LSMEM1-204ENST00000471030 ARHGAP5Q13017 1502 aa8.61□□□□□ -1.03
LSMEM1-204ENST00000471030 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
LSMEM1-204ENST00000471030 NBPF8Q3BBV2 869 aa8.61□□□□□ -1.03
LSMEM1-204ENST00000471030 PRKRIP1Q9H875 184 aaPredicted RBP8.61□□□□□ -1.03
LSMEM1-204ENST00000471030 RALGAPBQ86X10 1494 aa8.61□□□□□ -1.03
LSMEM1-204ENST00000471030 USP47Q96K76 1375 aa8.61□□□□□ -1.03
LSMEM1-204ENST00000471030 HNRNPMP52272 730 aaKnown RBP eCLIP8.6□□□□□ -1.03
LSMEM1-204ENST00000471030 POTEGQ6S5H5 508 aa8.6□□□□□ -1.03
LSMEM1-204ENST00000471030 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
LSMEM1-204ENST00000471030 PTCD2Q8WV60 388 aaKnown RBP8.6□□□□□ -1.03
LSMEM1-204ENST00000471030 CCDC144AA2RUR9 1427 aa8.6□□□□□ -1.03
LSMEM1-204ENST00000471030 RTEL1-TNFRSF6BF6WH68 1400 aa8.6□□□□□ -1.03
LSMEM1-204ENST00000471030 PLXNC1O60486 1568 aa8.6□□□□□ -1.03
LSMEM1-204ENST00000471030 DUOX2Q9NRD8 1548 aa8.59□□□□□ -1.03
LSMEM1-204ENST00000471030 KIF7Q2M1P5 1343 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms