RNA–Protein interactions for RNA: ENST00000470643.5

FLOT1-208, Transcript of flotillin 1, human

TSL 3

Gene FLOT1, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FLOT1-208	ENST00000470643	CHGA	P10645	457 aa	Known RBP	32.75	■■■□□ 2.83
FLOT1-208	ENST00000470643	PROSER2	Q86WR7	435 aa	Predicted RBP	32.74	■■■□□ 2.83
FLOT1-208	ENST00000470643	NUP155	O75694	1391 aa		32.73	■■■□□ 2.83
FLOT1-208	ENST00000470643	TMEM94	Q12767	1356 aa		32.73	■■■□□ 2.83
FLOT1-208	ENST00000470643	MED1	Q15648	1581 aa	Predicted RBP	32.71	■■■□□ 2.83
FLOT1-208	ENST00000470643	RIMS2	Q9UQ26	1411 aa		32.71	■■■□□ 2.83
FLOT1-208	ENST00000470643	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
FLOT1-208	ENST00000470643	PLEKHG1	Q9ULL1	1385 aa		32.7	■■■□□ 2.82
FLOT1-208	ENST00000470643	ZFYVE9	O95405	1425 aa		32.68	■■■□□ 2.82
FLOT1-208	ENST00000470643	IQGAP3	Q86VI3	1631 aa		32.67	■■■□□ 2.82
FLOT1-208	ENST00000470643	PHF23	Q9BUL5	403 aa	Predicted RBP	32.67	■■■□□ 2.82
FLOT1-208	ENST00000470643	TMEM131L	A2VDJ0	1609 aa		32.66	■■■□□ 2.82
FLOT1-208	ENST00000470643		E9PCH4	1651 aa		32.66	■■■□□ 2.82
FLOT1-208	ENST00000470643	XIRP1	Q702N8	1843 aa	Known RBP	32.65	■■■□□ 2.82
FLOT1-208	ENST00000470643	NKTR	P30414	1462 aa	Known RBP	32.65	■■■□□ 2.82
FLOT1-208	ENST00000470643	FAM135B	Q49AJ0	1406 aa		32.61	■■■□□ 2.81
FLOT1-208	ENST00000470643	MYO5B	Q9ULV0	1848 aa		32.61	■■■□□ 2.81
FLOT1-208	ENST00000470643	RBM33	Q96EV2	1170 aa	Known RBP	32.61	■■■□□ 2.81
FLOT1-208	ENST00000470643	TBX22	Q9Y458	520 aa		32.6	■■■□□ 2.81
FLOT1-208	ENST00000470643	NWD1	Q149M9	1564 aa		32.6	■■■□□ 2.81
FLOT1-208	ENST00000470643	MSH6	P52701	1360 aa		32.58	■■■□□ 2.81
FLOT1-208	ENST00000470643	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.56	■■■□□ 2.8
FLOT1-208	ENST00000470643	RRBP1	Q9P2E9	1410 aa	Known RBP	32.51	■■■□□ 2.79
FLOT1-208	ENST00000470643	C14orf37	Q86TY3	774 aa		32.49	■■■□□ 2.79
FLOT1-208	ENST00000470643	CHD2	O14647	1828 aa	Known RBP	32.49	■■■□□ 2.79
FLOT1-208	ENST00000470643	PIK3R4	Q99570	1358 aa		32.47	■■■□□ 2.79
FLOT1-208	ENST00000470643	DIP2A	Q14689	1571 aa		32.47	■■■□□ 2.79
FLOT1-208	ENST00000470643	SLAIN2	Q9P270	581 aa		32.47	■■■□□ 2.79
FLOT1-208	ENST00000470643	ADAMTS13	Q76LX8	1427 aa		32.46	■■■□□ 2.79
FLOT1-208	ENST00000470643	NCOA3	Q9Y6Q9	1424 aa		32.45	■■■□□ 2.79
FLOT1-208	ENST00000470643	ZNF326	Q5BKZ1	582 aa	Known RBP	32.45	■■■□□ 2.79
FLOT1-208	ENST00000470643	ROBO1	Q9Y6N7	1651 aa		32.44	■■■□□ 2.78
FLOT1-208	ENST00000470643	SPHKAP	Q2M3C7	1700 aa		32.4	■■■□□ 2.78
FLOT1-208	ENST00000470643	NAIP	Q13075	1403 aa		32.39	■■■□□ 2.78
FLOT1-208	ENST00000470643	TRPM2	O94759	1503 aa		32.39	■■■□□ 2.78
FLOT1-208	ENST00000470643	AMOTL2	Q9Y2J4	779 aa		32.38	■■■□□ 2.77
FLOT1-208	ENST00000470643	ATF3	P18847	181 aa		32.36	■■■□□ 2.77
FLOT1-208	ENST00000470643	CADPS2	Q86UW7	1296 aa		32.36	■■■□□ 2.77
FLOT1-208	ENST00000470643	TRIM52	Q96A61	297 aa		32.36	■■■□□ 2.77
FLOT1-208	ENST00000470643	C19orf44	Q9H6X5	657 aa		32.36	■■■□□ 2.77
FLOT1-208	ENST00000470643	HFM1	A2PYH4	1435 aa		32.29	■■■□□ 2.76
FLOT1-208	ENST00000470643	PTPRU	Q92729	1446 aa		32.27	■■■□□ 2.76
FLOT1-208	ENST00000470643	SETBP1	Q9Y6X0	1596 aa		32.27	■■■□□ 2.76
FLOT1-208	ENST00000470643	JCAD	Q9P266	1359 aa		32.26	■■■□□ 2.75
FLOT1-208	ENST00000470643	PHLPP1	O60346	1717 aa		32.26	■■■□□ 2.75
FLOT1-208	ENST00000470643	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.25	■■■□□ 2.75
FLOT1-208	ENST00000470643	RGS17	Q9UGC6	210 aa	Predicted RBP	32.25	■■■□□ 2.75
FLOT1-208	ENST00000470643	CLTCL1	P53675	1640 aa		32.25	■■■□□ 2.75
FLOT1-208	ENST00000470643	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.23	■■■□□ 2.75
FLOT1-208	ENST00000470643	NRXN3	Q9Y4C0	1643 aa		32.21	■■■□□ 2.75
FLOT1-208	ENST00000470643	MET	P08581	1390 aa		32.19	■■■□□ 2.74
FLOT1-208	ENST00000470643	KIF1B	O60333	1816 aa		32.19	■■■□□ 2.74
FLOT1-208	ENST00000470643	VGF	O15240	615 aa	Predicted RBP	32.19	■■■□□ 2.74
FLOT1-208	ENST00000470643	NEXMIF	Q5QGS0	1516 aa		32.19	■■■□□ 2.74
FLOT1-208	ENST00000470643	DCC	P43146	1447 aa		32.18	■■■□□ 2.74
FLOT1-208	ENST00000470643	XRN1	Q8IZH2	1706 aa	Known RBP	32.16	■■■□□ 2.74
FLOT1-208	ENST00000470643	RPGRIP1L	Q68CZ1	1315 aa		32.14	■■■□□ 2.74
FLOT1-208	ENST00000470643	COL16A1	Q07092	1604 aa	Predicted RBP	32.13	■■■□□ 2.73
FLOT1-208	ENST00000470643	SPATA31A6	Q5VVP1	1343 aa		32.12	■■■□□ 2.73
FLOT1-208	ENST00000470643	BRINP3	Q76B58	766 aa		32.12	■■■□□ 2.73
FLOT1-208	ENST00000470643	POTEA	Q6S8J7	498 aa		32.1	■■■□□ 2.73
FLOT1-208	ENST00000470643	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.1	■■■□□ 2.73
FLOT1-208	ENST00000470643	MEX3C	Q5U5Q3	659 aa	Known RBP	32.08	■■■□□ 2.73
FLOT1-208	ENST00000470643	ADGRL3	Q9HAR2	1447 aa		32.06	■■■□□ 2.72
FLOT1-208	ENST00000470643	MST1R	Q04912	1400 aa		32.04	■■■□□ 2.72
FLOT1-208	ENST00000470643	ASXL1	Q8IXJ9	1541 aa		32.01	■■■□□ 2.72
FLOT1-208	ENST00000470643	FOXD1	Q16676	465 aa		32.01	■■■□□ 2.71
FLOT1-208	ENST00000470643	CCDC144A	A2RUR9	1427 aa		32	■■■□□ 2.71
FLOT1-208	ENST00000470643	PTCH1	Q13635	1447 aa		31.99	■■■□□ 2.71
FLOT1-208	ENST00000470643	ACIN1	Q9UKV3	1341 aa	Known RBP	31.98	■■■□□ 2.71
FLOT1-208	ENST00000470643	ZNF772	Q68DY9	489 aa	Predicted RBP	31.97	■■■□□ 2.71
FLOT1-208	ENST00000470643	LRRC59	Q96AG4	307 aa	Known RBP	31.97	■■■□□ 2.71
FLOT1-208	ENST00000470643	MPHOSPH9	Q99550	1183 aa		31.97	■■■□□ 2.71
FLOT1-208	ENST00000470643	SHPRH	Q149N8	1683 aa		31.96	■■■□□ 2.71
FLOT1-208	ENST00000470643	LRP6	O75581	1613 aa		31.95	■■■□□ 2.71
FLOT1-208	ENST00000470643	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.94	■■■□□ 2.7
FLOT1-208	ENST00000470643	NUTM2E	B1AL46	878 aa	Predicted RBP	31.94	■■■□□ 2.7
FLOT1-208	ENST00000470643	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.94	■■■□□ 2.7
FLOT1-208	ENST00000470643	SETD5	Q9C0A6	1442 aa		31.93	■■■□□ 2.7
FLOT1-208	ENST00000470643	ROBO2	Q9HCK4	1378 aa		31.93	■■■□□ 2.7
FLOT1-208	ENST00000470643	NALCN	Q8IZF0	1738 aa		31.92	■■■□□ 2.7
FLOT1-208	ENST00000470643	RGL3	Q3MIN7	710 aa		31.92	■■■□□ 2.7
FLOT1-208	ENST00000470643	PPL	O60437	1756 aa		31.91	■■■□□ 2.7
FLOT1-208	ENST00000470643	SETD1A	O15047	1707 aa	Known RBP	31.89	■■■□□ 2.7
FLOT1-208	ENST00000470643	PRAG1	Q86YV5	1406 aa		31.89	■■■□□ 2.7
FLOT1-208	ENST00000470643	ANKRD30B	Q9BXX2	1392 aa		31.88	■■■□□ 2.69
FLOT1-208	ENST00000470643	C1orf167	Q5SNV9	1468 aa		31.88	■■■□□ 2.69
FLOT1-208	ENST00000470643	NHSL1	Q5SYE7	1610 aa		31.88	■■■□□ 2.69
FLOT1-208	ENST00000470643	ADGRF5	Q8IZF2	1346 aa		31.85	■■■□□ 2.69
FLOT1-208	ENST00000470643	DDX17	Q92841	729 aa	Known RBP	31.85	■■■□□ 2.69
FLOT1-208	ENST00000470643	SPATA31E1	Q6ZUB1	1445 aa		31.83	■■■□□ 2.69
FLOT1-208	ENST00000470643	ORAI2	Q96SN7	254 aa		31.8	■■■□□ 2.68
FLOT1-208	ENST00000470643	STK26	Q9P289	416 aa		31.79	■■■□□ 2.68
FLOT1-208	ENST00000470643	PNPLA6	Q8IY17	1366 aa		31.79	■■■□□ 2.68
FLOT1-208	ENST00000470643	RXRB	P28702	533 aa		31.78	■■■□□ 2.68
FLOT1-208	ENST00000470643	AFF2	P51816	1311 aa		31.76	■■■□□ 2.68
FLOT1-208	ENST00000470643	LRPPRC	P42704	1394 aa	Known RBP	31.74	■■■□□ 2.67
FLOT1-208	ENST00000470643	C8orf37	Q96NL8	207 aa		31.74	■■■□□ 2.67
FLOT1-208	ENST00000470643	SOS2	Q07890	1332 aa	Predicted RBP	31.74	■■■□□ 2.67
FLOT1-208	ENST00000470643	ESCO1	Q5FWF5	840 aa		31.73	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms