RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
SSB-209ENST00000470621 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
SSB-209ENST00000470621 BCAMP50895 628 aa12.72□□□□□ -0.37
SSB-209ENST00000470621 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
SSB-209ENST00000470621 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
SSB-209ENST00000470621 DNAJB2P25686 324 aa12.68□□□□□ -0.38
SSB-209ENST00000470621 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
SSB-209ENST00000470621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
SSB-209ENST00000470621 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
SSB-209ENST00000470621 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
SSB-209ENST00000470621 SAMD7Q7Z3H4 446 aa12.67□□□□□ -0.38
SSB-209ENST00000470621 REPIN1Q9BWE0 567 aaKnown RBP12.67□□□□□ -0.38
SSB-209ENST00000470621 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
SSB-209ENST00000470621 AMHR2Q16671 573 aa12.66□□□□□ -0.38
SSB-209ENST00000470621 PDE4DQ08499 809 aa12.64□□□□□ -0.39
SSB-209ENST00000470621 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
SSB-209ENST00000470621 TTLL12Q14166 644 aaPredicted RBP12.62□□□□□ -0.39
SSB-209ENST00000470621 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
SSB-209ENST00000470621 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
SSB-209ENST00000470621 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
SSB-209ENST00000470621 RNF40O75150 1001 aa12.59□□□□□ -0.39
SSB-209ENST00000470621 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
SSB-209ENST00000470621 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.59□□□□□ -0.39
SSB-209ENST00000470621 KCNC4Q03721 635 aa12.58□□□□□ -0.4
SSB-209ENST00000470621 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
SSB-209ENST00000470621 LRCH3Q96II8 777 aa12.58□□□□□ -0.4
SSB-209ENST00000470621 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
SSB-209ENST00000470621 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
SSB-209ENST00000470621 CLCN1P35523 988 aa12.56□□□□□ -0.4
SSB-209ENST00000470621 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
SSB-209ENST00000470621 HPS5Q9UPZ3 1129 aa12.56□□□□□ -0.4
SSB-209ENST00000470621 DDX11L8A8MPP1 907 aa12.55□□□□□ -0.4
SSB-209ENST00000470621 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
SSB-209ENST00000470621 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
SSB-209ENST00000470621 SLC10A3P09131 477 aa12.53□□□□□ -0.4
SSB-209ENST00000470621 MS4A1P11836 297 aa12.53□□□□□ -0.4
SSB-209ENST00000470621 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
SSB-209ENST00000470621 SLF2Q8IX21 1173 aa12.52□□□□□ -0.41
SSB-209ENST00000470621 KDM4CQ9H3R0 1056 aa12.51□□□□□ -0.41
SSB-209ENST00000470621 SSTR3P32745 418 aaPredicted RBP12.5□□□□□ -0.41
SSB-209ENST00000470621 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
SSB-209ENST00000470621 CD46P15529 392 aa12.48□□□□□ -0.41
SSB-209ENST00000470621 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
SSB-209ENST00000470621 CFHP08603 1231 aa12.46□□□□□ -0.41
SSB-209ENST00000470621 PPP4CP60510 307 aa12.46□□□□□ -0.41
SSB-209ENST00000470621 SLC4A3P48751 1232 aa12.44□□□□□ -0.42
SSB-209ENST00000470621 APLP1P51693 650 aa12.44□□□□□ -0.42
SSB-209ENST00000470621 BEGAINQ9BUH8 593 aa12.43□□□□□ -0.42
SSB-209ENST00000470621 FAM117AQ9C073 453 aa12.42□□□□□ -0.42
SSB-209ENST00000470621 GCGRP47871 477 aa12.4□□□□□ -0.42
SSB-209ENST00000470621 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
SSB-209ENST00000470621 Q6ZNB5 142 aa12.4□□□□□ -0.42
SSB-209ENST00000470621 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
SSB-209ENST00000470621 PLEKHG3A1L390 1219 aa12.37□□□□□ -0.43
SSB-209ENST00000470621 FUT2Q10981 343 aa12.36□□□□□ -0.43
SSB-209ENST00000470621 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
SSB-209ENST00000470621 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
SSB-209ENST00000470621 LAPTM4AQ15012 233 aa12.35□□□□□ -0.43
SSB-209ENST00000470621 HLA-CQ95604 372 aa12.35□□□□□ -0.43
SSB-209ENST00000470621 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
SSB-209ENST00000470621 SPIRE2Q8WWL2 714 aa12.34□□□□□ -0.43
SSB-209ENST00000470621 MTRQ99707 1265 aa12.34□□□□□ -0.43
SSB-209ENST00000470621 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
SSB-209ENST00000470621 KDM4AO75164 1064 aa12.33□□□□□ -0.44
SSB-209ENST00000470621 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
SSB-209ENST00000470621 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
SSB-209ENST00000470621 GUCA2AQ02747 115 aa12.31□□□□□ -0.44
SSB-209ENST00000470621 DDRGK1Q96HY6 314 aa12.31□□□□□ -0.44
SSB-209ENST00000470621 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
SSB-209ENST00000470621 HOXA2O43364 376 aa12.3□□□□□ -0.44
SSB-209ENST00000470621 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
SSB-209ENST00000470621 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
SSB-209ENST00000470621 PRR14Q9BWN1 585 aa12.3□□□□□ -0.44
SSB-209ENST00000470621 PCDHB3Q9Y5E6 796 aa12.3□□□□□ -0.44
SSB-209ENST00000470621 MOXD2PA6NHM9 499 aa12.28□□□□□ -0.44
SSB-209ENST00000470621 NDUFV2P19404 249 aa12.28□□□□□ -0.44
SSB-209ENST00000470621 COPS2P61201 443 aa12.28□□□□□ -0.44
SSB-209ENST00000470621 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
SSB-209ENST00000470621 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
SSB-209ENST00000470621 GFRA3O60609 400 aa12.27□□□□□ -0.45
SSB-209ENST00000470621 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
SSB-209ENST00000470621 MORN1Q5T089 497 aa12.27□□□□□ -0.45
SSB-209ENST00000470621 MYSM1Q5VVJ2 828 aa12.27□□□□□ -0.45
SSB-209ENST00000470621 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
SSB-209ENST00000470621 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
SSB-209ENST00000470621 USP46P62068 366 aa12.24□□□□□ -0.45
SSB-209ENST00000470621 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.24□□□□□ -0.45
SSB-209ENST00000470621 SLC27A5Q9Y2P5 690 aa12.24□□□□□ -0.45
SSB-209ENST00000470621 LIMD1Q9UGP4 676 aa12.23□□□□□ -0.45
SSB-209ENST00000470621 LCE2BO14633 110 aa12.22□□□□□ -0.45
SSB-209ENST00000470621 TLL1O43897 1013 aa12.22□□□□□ -0.45
SSB-209ENST00000470621 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
SSB-209ENST00000470621 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
SSB-209ENST00000470621 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
SSB-209ENST00000470621 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
SSB-209ENST00000470621 SCUBE3Q8IX30 993 aa12.21□□□□□ -0.45
SSB-209ENST00000470621 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
SSB-209ENST00000470621 FDX1P10109 184 aa12.2□□□□□ -0.46
SSB-209ENST00000470621 DIXDC1Q155Q3 683 aa12.2□□□□□ -0.46
SSB-209ENST00000470621 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms