RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 WASHC2AQ641Q2 1341 aa11.78□□□□□ -0.52
GTF3A-206ENST00000470606 CEBPAP49715 358 aaPredicted RBP11.78□□□□□ -0.52
GTF3A-206ENST00000470606 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
GTF3A-206ENST00000470606 C3P01024 1663 aa11.77□□□□□ -0.53
GTF3A-206ENST00000470606 NUTM2DQ5VT03 806 aaPredicted RBP11.76□□□□□ -0.53
GTF3A-206ENST00000470606 LAMC1P11047 1609 aa11.76□□□□□ -0.53
GTF3A-206ENST00000470606 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
GTF3A-206ENST00000470606 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
GTF3A-206ENST00000470606 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
GTF3A-206ENST00000470606 PIK3C2GO75747 1445 aa11.75□□□□□ -0.53
GTF3A-206ENST00000470606 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
GTF3A-206ENST00000470606 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
GTF3A-206ENST00000470606 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
GTF3A-206ENST00000470606 A2ML1A8K2U0 1454 aa11.74□□□□□ -0.53
GTF3A-206ENST00000470606 MIER1Q8N108 512 aa11.74□□□□□ -0.53
GTF3A-206ENST00000470606 POLR1AO95602 1720 aaPredicted RBP11.73□□□□□ -0.53
GTF3A-206ENST00000470606 IQGAP1P46940 1657 aa11.73□□□□□ -0.53
GTF3A-206ENST00000470606 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
GTF3A-206ENST00000470606 KIF7Q2M1P5 1343 aa11.72□□□□□ -0.53
GTF3A-206ENST00000470606 TNRQ92752 1358 aa11.72□□□□□ -0.53
GTF3A-206ENST00000470606 CCDC7Q96M83 1385 aa11.72□□□□□ -0.53
GTF3A-206ENST00000470606 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
GTF3A-206ENST00000470606 ADGRB1O14514 1584 aa11.71□□□□□ -0.53
GTF3A-206ENST00000470606 TESK2Q96S53 571 aa11.71□□□□□ -0.53
GTF3A-206ENST00000470606 ZFYVE9O95405 1425 aa11.7□□□□□ -0.54
GTF3A-206ENST00000470606 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
GTF3A-206ENST00000470606 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
GTF3A-206ENST00000470606 UBR1Q8IWV7 1749 aa11.7□□□□□ -0.54
GTF3A-206ENST00000470606 C14orf93Q9H972 538 aaKnown RBP11.7□□□□□ -0.54
GTF3A-206ENST00000470606 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
GTF3A-206ENST00000470606 ASXL1Q8IXJ9 1541 aa11.68□□□□□ -0.54
GTF3A-206ENST00000470606 SCAF11Q99590 1463 aaKnown RBP11.68□□□□□ -0.54
GTF3A-206ENST00000470606 SETBP1Q9Y6X0 1596 aa11.68□□□□□ -0.54
GTF3A-206ENST00000470606 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
GTF3A-206ENST00000470606 TMEM132EQ6IEE7 984 aa11.68□□□□□ -0.54
GTF3A-206ENST00000470606 KDM5AP29375 1690 aaKnown RBP11.67□□□□□ -0.54
GTF3A-206ENST00000470606 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
GTF3A-206ENST00000470606 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
GTF3A-206ENST00000470606 DISP3Q9P2K9 1392 aa11.66□□□□□ -0.54
GTF3A-206ENST00000470606 NRXN3Q9Y4C0 1643 aa11.66□□□□□ -0.54
GTF3A-206ENST00000470606 SETD1AO15047 1707 aaKnown RBP11.65□□□□□ -0.54
GTF3A-206ENST00000470606 PTPRMP28827 1452 aa11.65□□□□□ -0.54
GTF3A-206ENST00000470606 NLRP1Q9C000 1473 aa11.65□□□□□ -0.55
GTF3A-206ENST00000470606 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
GTF3A-206ENST00000470606 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
GTF3A-206ENST00000470606 TMEM2Q9UHN6 1383 aa11.63□□□□□ -0.55
GTF3A-206ENST00000470606 LTKP29376 864 aa11.63□□□□□ -0.55
GTF3A-206ENST00000470606 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
GTF3A-206ENST00000470606 ARHGEF28Q8N1W1 1705 aaKnown RBP11.62□□□□□ -0.55
GTF3A-206ENST00000470606 SETD1BQ9UPS6 1966 aaKnown RBP11.61□□□□□ -0.55
GTF3A-206ENST00000470606 POLR3GLQ9BT43 218 aa11.6□□□□□ -0.55
GTF3A-206ENST00000470606 ARHGAP23Q9P227 1491 aa11.6□□□□□ -0.55
GTF3A-206ENST00000470606 SLIT1O75093 1534 aa11.59□□□□□ -0.55
GTF3A-206ENST00000470606 CEP170BQ9Y4F5 1589 aaPredicted RBP11.59□□□□□ -0.55
GTF3A-206ENST00000470606 QRICH2Q9H0J4 1663 aa11.59□□□□□ -0.55
GTF3A-206ENST00000470606 METP08581 1390 aa11.58□□□□□ -0.56
GTF3A-206ENST00000470606 ADAMTS13Q76LX8 1427 aa11.58□□□□□ -0.56
GTF3A-206ENST00000470606 STK26Q9P289 416 aa11.58□□□□□ -0.56
GTF3A-206ENST00000470606 YTHDC2Q9H6S0 1430 aaKnown RBP11.57□□□□□ -0.56
GTF3A-206ENST00000470606 EIF3AQ14152 1382 aaKnown RBP11.57□□□□□ -0.56
GTF3A-206ENST00000470606 CENPJQ9HC77 1338 aaPredicted RBP11.57□□□□□ -0.56
GTF3A-206ENST00000470606 MYOM1P52179 1685 aa11.57□□□□□ -0.56
GTF3A-206ENST00000470606 ZNF142P52746 1687 aaPredicted RBP11.57□□□□□ -0.56
GTF3A-206ENST00000470606 SBNO2Q9Y2G9 1366 aa11.56□□□□□ -0.56
GTF3A-206ENST00000470606 TMF1P82094 1093 aa11.56□□□□□ -0.56
GTF3A-206ENST00000470606 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.56□□□□□ -0.56
GTF3A-206ENST00000470606 TXNDC2Q86VQ3 553 aa11.56□□□□□ -0.56
GTF3A-206ENST00000470606 MED14O60244 1454 aa11.55□□□□□ -0.56
GTF3A-206ENST00000470606 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
GTF3A-206ENST00000470606 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
GTF3A-206ENST00000470606 TULP4Q9NRJ4 1543 aa11.54□□□□□ -0.56
GTF3A-206ENST00000470606 PER1O15534 1290 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-206ENST00000470606 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
GTF3A-206ENST00000470606 THEMISQ8N1K5 641 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-206ENST00000470606 LRPPRCP42704 1394 aaKnown RBP11.53□□□□□ -0.56
GTF3A-206ENST00000470606 PLEKHH1Q9ULM0 1364 aa11.53□□□□□ -0.56
GTF3A-206ENST00000470606 KDM4FA0A1W2PPD8 638 aa11.52□□□□□ -0.56
GTF3A-206ENST00000470606 ANP32CO43423 234 aa11.52□□□□□ -0.56
GTF3A-206ENST00000470606 PRAM1Q96QH2 718 aa11.52□□□□□ -0.56
GTF3A-206ENST00000470606 SLC26A8Q96RN1 970 aa11.52□□□□□ -0.56
GTF3A-206ENST00000470606 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
GTF3A-206ENST00000470606 WAPLQ7Z5K2 1190 aa11.52□□□□□ -0.57
GTF3A-206ENST00000470606 PRKRIP1Q9H875 184 aaPredicted RBP11.52□□□□□ -0.57
GTF3A-206ENST00000470606 ABCC11Q96J66 1382 aa11.52□□□□□ -0.57
GTF3A-206ENST00000470606 PTPRUQ92729 1446 aa11.51□□□□□ -0.57
GTF3A-206ENST00000470606 DLC1Q96QB1 1528 aa11.51□□□□□ -0.57
GTF3A-206ENST00000470606 CCDC184Q52MB2 194 aa11.5□□□□□ -0.57
GTF3A-206ENST00000470606 PANK3Q9H999 370 aa11.5□□□□□ -0.57
GTF3A-206ENST00000470606 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
GTF3A-206ENST00000470606 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
GTF3A-206ENST00000470606 TECPR2O15040 1411 aa11.5□□□□□ -0.57
GTF3A-206ENST00000470606 BCANQ96GW7 911 aa11.49□□□□□ -0.57
GTF3A-206ENST00000470606 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-206ENST00000470606 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
GTF3A-206ENST00000470606 ROBO2Q9HCK4 1378 aa11.48□□□□□ -0.57
GTF3A-206ENST00000470606 CPS1P31327 1500 aa11.48□□□□□ -0.57
GTF3A-206ENST00000470606 CCER2I3L3R5 266 aa11.47□□□□□ -0.57
GTF3A-206ENST00000470606 CDCA8Q53HL2 280 aa11.47□□□□□ -0.57
GTF3A-206ENST00000470606 CARD14Q9BXL6 1004 aa11.47□□□□□ -0.57
GTF3A-206ENST00000470606 SLC12A5Q9H2X9 1139 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms