RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 ZFYVE9O95405 1425 aa21.44■■□□□ 1.02
COL4A5-203ENST00000470339 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
COL4A5-203ENST00000470339 LAMC1P11047 1609 aa21.44■■□□□ 1.02
COL4A5-203ENST00000470339 SETD1BQ9UPS6 1966 aaKnown RBP21.41■■□□□ 1.02
COL4A5-203ENST00000470339 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
COL4A5-203ENST00000470339 GPRASP1Q5JY77 1395 aa21.41■■□□□ 1.02
COL4A5-203ENST00000470339 VGFO15240 615 aaPredicted RBP21.41■■□□□ 1.02
COL4A5-203ENST00000470339 EIF4G2P78344 907 aaKnown RBP eCLIP21.41■■□□□ 1.02
COL4A5-203ENST00000470339 CEBPAP49715 358 aaPredicted RBP21.4■■□□□ 1.02
COL4A5-203ENST00000470339 STAG3Q9UJ98 1225 aa21.4■■□□□ 1.02
COL4A5-203ENST00000470339 UBR1Q8IWV7 1749 aa21.39■■□□□ 1.01
COL4A5-203ENST00000470339 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
COL4A5-203ENST00000470339 ADGRF5Q8IZF2 1346 aa21.37■■□□□ 1.01
COL4A5-203ENST00000470339 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
COL4A5-203ENST00000470339 PIK3C2GO75747 1445 aa21.35■■□□□ 1.01
COL4A5-203ENST00000470339 HSPA5P11021 654 aaKnown RBP21.34■■□□□ 1.01
COL4A5-203ENST00000470339 HDGFP51858 240 aaKnown RBP21.34■■□□□ 1.01
COL4A5-203ENST00000470339 MYO3AQ8NEV4 1616 aa21.33■■□□□ 1.01
COL4A5-203ENST00000470339 SETBP1Q9Y6X0 1596 aa21.33■■□□□ 1.01
COL4A5-203ENST00000470339 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
COL4A5-203ENST00000470339 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.32■■□□□ 1
COL4A5-203ENST00000470339 USP47Q96K76 1375 aa21.32■■□□□ 1
COL4A5-203ENST00000470339 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
COL4A5-203ENST00000470339 C14orf93Q9H972 538 aaKnown RBP21.31■■□□□ 1
COL4A5-203ENST00000470339 IQGAP1P46940 1657 aa21.29■■□□□ 1
COL4A5-203ENST00000470339 PTPRMP28827 1452 aa21.29■■□□□ 1
COL4A5-203ENST00000470339 TMEM2Q9UHN6 1383 aa21.28■■□□□ 1
COL4A5-203ENST00000470339 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
COL4A5-203ENST00000470339 POLR1AO95602 1720 aaPredicted RBP21.27■■□□□ 1
COL4A5-203ENST00000470339 CFAP70Q5T0N1 1121 aa21.27■■□□□ 1
COL4A5-203ENST00000470339 SLIT1O75093 1534 aa21.26■□□□□ 0.99
COL4A5-203ENST00000470339 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
COL4A5-203ENST00000470339 CEP170BQ9Y4F5 1589 aaPredicted RBP21.26■□□□□ 0.99
COL4A5-203ENST00000470339 SCAF11Q99590 1463 aaKnown RBP21.25■□□□□ 0.99
COL4A5-203ENST00000470339 PLPPR3Q6T4P5 718 aa21.24■□□□□ 0.99
COL4A5-203ENST00000470339 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
COL4A5-203ENST00000470339 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
COL4A5-203ENST00000470339 ADGRB1O14514 1584 aa21.23■□□□□ 0.99
COL4A5-203ENST00000470339 NUTM2DQ5VT03 806 aaPredicted RBP21.22■□□□□ 0.99
COL4A5-203ENST00000470339 ALKQ9UM73 1620 aa21.21■□□□□ 0.99
COL4A5-203ENST00000470339 ST20-MTHFSA0A0A6YYL1 179 aa21.2■□□□□ 0.98
COL4A5-203ENST00000470339 EIF3AQ14152 1382 aaKnown RBP21.2■□□□□ 0.98
COL4A5-203ENST00000470339 EID1Q9Y6B2 187 aa21.19■□□□□ 0.98
COL4A5-203ENST00000470339 SETD1AO15047 1707 aaKnown RBP21.18■□□□□ 0.98
COL4A5-203ENST00000470339 SLC24A1O60721 1099 aa21.17■□□□□ 0.98
COL4A5-203ENST00000470339 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
COL4A5-203ENST00000470339 NRXN3Q9Y4C0 1643 aa21.17■□□□□ 0.98
COL4A5-203ENST00000470339 PLEKHG1Q9ULL1 1385 aa21.16■□□□□ 0.98
COL4A5-203ENST00000470339 TXNDC2Q86VQ3 553 aa21.15■□□□□ 0.98
COL4A5-203ENST00000470339 CCDC7Q96M83 1385 aa21.13■□□□□ 0.97
COL4A5-203ENST00000470339 WASHC2AQ641Q2 1341 aa21.13■□□□□ 0.97
COL4A5-203ENST00000470339 LTKP29376 864 aa21.13■□□□□ 0.97
COL4A5-203ENST00000470339 ASXL1Q8IXJ9 1541 aa21.13■□□□□ 0.97
COL4A5-203ENST00000470339 TMEM132EQ6IEE7 984 aa21.12■□□□□ 0.97
COL4A5-203ENST00000470339 TESK2Q96S53 571 aa21.12■□□□□ 0.97
COL4A5-203ENST00000470339 C11orf95C9JLR9 678 aaPredicted RBP21.11■□□□□ 0.97
COL4A5-203ENST00000470339 ARHGEF28Q8N1W1 1705 aaKnown RBP21.1■□□□□ 0.97
COL4A5-203ENST00000470339 SBNO2Q9Y2G9 1366 aa21.1■□□□□ 0.97
COL4A5-203ENST00000470339 YTHDC2Q9H6S0 1430 aaKnown RBP21.09■□□□□ 0.97
COL4A5-203ENST00000470339 DIP2AQ14689 1571 aa21.09■□□□□ 0.97
COL4A5-203ENST00000470339 KIF7Q2M1P5 1343 aa21.08■□□□□ 0.97
COL4A5-203ENST00000470339 MED14O60244 1454 aa21.08■□□□□ 0.97
COL4A5-203ENST00000470339 ADAMTS13Q76LX8 1427 aa21.07■□□□□ 0.96
COL4A5-203ENST00000470339 TMF1P82094 1093 aa21.07■□□□□ 0.96
COL4A5-203ENST00000470339 ANKLE2Q86XL3 938 aa21.07■□□□□ 0.96
COL4A5-203ENST00000470339 LRPPRCP42704 1394 aaKnown RBP21.07■□□□□ 0.96
COL4A5-203ENST00000470339 DLC1Q96QB1 1528 aa21.06■□□□□ 0.96
COL4A5-203ENST00000470339 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
COL4A5-203ENST00000470339 TRAK1Q9UPV9 953 aa21.06■□□□□ 0.96
COL4A5-203ENST00000470339 QRICH2Q9H0J4 1663 aa21.05■□□□□ 0.96
COL4A5-203ENST00000470339 CENPJQ9HC77 1338 aaPredicted RBP21.05■□□□□ 0.96
COL4A5-203ENST00000470339 KNDC1Q76NI1 1749 aa21.05■□□□□ 0.96
COL4A5-203ENST00000470339 TBX22Q9Y458 520 aa21.05■□□□□ 0.96
COL4A5-203ENST00000470339 ABCC11Q96J66 1382 aa21.05■□□□□ 0.96
COL4A5-203ENST00000470339 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
COL4A5-203ENST00000470339 BCANQ96GW7 911 aa21.04■□□□□ 0.96
COL4A5-203ENST00000470339 SIRT1Q96EB6 747 aa21.03■□□□□ 0.96
COL4A5-203ENST00000470339 METP08581 1390 aa21.02■□□□□ 0.96
COL4A5-203ENST00000470339 TECPR2O15040 1411 aa21.01■□□□□ 0.95
COL4A5-203ENST00000470339 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
COL4A5-203ENST00000470339 DISP3Q9P2K9 1392 aa20.99■□□□□ 0.95
COL4A5-203ENST00000470339 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
COL4A5-203ENST00000470339 STK26Q9P289 416 aa20.99■□□□□ 0.95
COL4A5-203ENST00000470339 FAM135BQ49AJ0 1406 aa20.97■□□□□ 0.95
COL4A5-203ENST00000470339 PUS7Q96PZ0 661 aaKnown RBP20.97■□□□□ 0.95
COL4A5-203ENST00000470339 CPS1P31327 1500 aa20.97■□□□□ 0.95
COL4A5-203ENST00000470339 SLC26A8Q96RN1 970 aa20.95■□□□□ 0.94
COL4A5-203ENST00000470339 POGKQ9P215 609 aa20.95■□□□□ 0.94
COL4A5-203ENST00000470339 PRAM1Q96QH2 718 aa20.94■□□□□ 0.94
COL4A5-203ENST00000470339 NPHP4O75161 1426 aaPredicted RBP20.94■□□□□ 0.94
COL4A5-203ENST00000470339 CHD2O14647 1828 aaKnown RBP20.93■□□□□ 0.94
COL4A5-203ENST00000470339 EVC2Q86UK5 1308 aa20.92■□□□□ 0.94
COL4A5-203ENST00000470339 XRN1Q8IZH2 1706 aaKnown RBP20.91■□□□□ 0.94
COL4A5-203ENST00000470339 POLR3GLQ9BT43 218 aa20.91■□□□□ 0.94
COL4A5-203ENST00000470339 LMTK3Q96Q04 1460 aa20.9■□□□□ 0.94
COL4A5-203ENST00000470339 PTPRUQ92729 1446 aa20.9■□□□□ 0.94
COL4A5-203ENST00000470339 PTCH1Q13635 1447 aa20.88■□□□□ 0.93
COL4A5-203ENST00000470339 NCKAP5LQ9HCH0 1330 aa20.88■□□□□ 0.93
COL4A5-203ENST00000470339 AMOTL2Q9Y2J4 779 aa20.88■□□□□ 0.93
COL4A5-203ENST00000470339 TULP4Q9NRJ4 1543 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms