RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 NLRP7Q8WX94 980 aa8.51□□□□□ -1.05
SRRM1-208ENST00000470243 MDM2Q00987 491 aaPredicted RBP8.5□□□□□ -1.05
SRRM1-208ENST00000470243 MS4A1P11836 297 aa8.49□□□□□ -1.05
SRRM1-208ENST00000470243 METTL3Q86U44 580 aaKnown RBP8.49□□□□□ -1.05
SRRM1-208ENST00000470243 RBM27Q9P2N5 1060 aaKnown RBP8.49□□□□□ -1.05
SRRM1-208ENST00000470243 ADGRG1Q9Y653 693 aa8.49□□□□□ -1.05
SRRM1-208ENST00000470243 PRSS12P56730 875 aa8.48□□□□□ -1.05
SRRM1-208ENST00000470243 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
SRRM1-208ENST00000470243 TTC13Q8NBP0 860 aa8.48□□□□□ -1.05
SRRM1-208ENST00000470243 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
SRRM1-208ENST00000470243 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
SRRM1-208ENST00000470243 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
SRRM1-208ENST00000470243 TMUB1Q9BVT8 246 aa8.47□□□□□ -1.05
SRRM1-208ENST00000470243 FAM198AQ9UFP1 575 aa8.47□□□□□ -1.05
SRRM1-208ENST00000470243 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
SRRM1-208ENST00000470243 CLCN1P35523 988 aa8.46□□□□□ -1.06
SRRM1-208ENST00000470243 C14orf37Q86TY3 774 aa8.46□□□□□ -1.06
SRRM1-208ENST00000470243 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
SRRM1-208ENST00000470243 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
SRRM1-208ENST00000470243 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
SRRM1-208ENST00000470243 TRIM6-TRIM34B2RNG4 842 aa8.45□□□□□ -1.06
SRRM1-208ENST00000470243 LCE2BO14633 110 aa8.44□□□□□ -1.06
SRRM1-208ENST00000470243 GFRA3O60609 400 aa8.44□□□□□ -1.06
SRRM1-208ENST00000470243 OATP04181 439 aa8.44□□□□□ -1.06
SRRM1-208ENST00000470243 FAM98CQ17RN3 349 aaKnown RBP8.44□□□□□ -1.06
SRRM1-208ENST00000470243 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
SRRM1-208ENST00000470243 TSR3Q9UJK0 312 aaKnown RBP8.44□□□□□ -1.06
SRRM1-208ENST00000470243 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
SRRM1-208ENST00000470243 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
SRRM1-208ENST00000470243 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
SRRM1-208ENST00000470243 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
SRRM1-208ENST00000470243 RBM46Q8TBY0 533 aaKnown RBP8.41□□□□□ -1.06
SRRM1-208ENST00000470243 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
SRRM1-208ENST00000470243 SSTR3P32745 418 aaPredicted RBP8.4□□□□□ -1.06
SRRM1-208ENST00000470243 LAPTM4AQ15012 233 aa8.39□□□□□ -1.07
SRRM1-208ENST00000470243 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
SRRM1-208ENST00000470243 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
SRRM1-208ENST00000470243 PPP4CP60510 307 aa8.38□□□□□ -1.07
SRRM1-208ENST00000470243 ERICH6Q7L0X2 663 aa8.38□□□□□ -1.07
SRRM1-208ENST00000470243 EYA1Q99502 592 aa8.38□□□□□ -1.07
SRRM1-208ENST00000470243 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
SRRM1-208ENST00000470243 PRKD2Q9BZL6 878 aa8.38□□□□□ -1.07
SRRM1-208ENST00000470243 NBPF26B4DH59 902 aa8.37□□□□□ -1.07
SRRM1-208ENST00000470243 SMAPO00193 183 aa8.37□□□□□ -1.07
SRRM1-208ENST00000470243 PNMA3Q9UL41 463 aa8.37□□□□□ -1.07
SRRM1-208ENST00000470243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
SRRM1-208ENST00000470243 TJAP1Q5JTD0 557 aa8.36□□□□□ -1.07
SRRM1-208ENST00000470243 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
SRRM1-208ENST00000470243 SH3D19Q5HYK7 790 aa8.35□□□□□ -1.07
SRRM1-208ENST00000470243 TATDN2Q93075 761 aa8.35□□□□□ -1.07
SRRM1-208ENST00000470243 GOPCQ9HD26 462 aa8.35□□□□□ -1.07
SRRM1-208ENST00000470243 SAMD7Q7Z3H4 446 aa8.34□□□□□ -1.07
SRRM1-208ENST00000470243 DNAJB2P25686 324 aa8.33□□□□□ -1.08
SRRM1-208ENST00000470243 PPP1R18Q6NYC8 613 aa8.33□□□□□ -1.08
SRRM1-208ENST00000470243 PCMTD1Q96MG8 357 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-208ENST00000470243 MTRQ99707 1265 aa8.33□□□□□ -1.08
SRRM1-208ENST00000470243 ZNF516Q92618 1163 aa8.32□□□□□ -1.08
SRRM1-208ENST00000470243 TMEM134Q9H6X4 195 aa8.32□□□□□ -1.08
SRRM1-208ENST00000470243 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-208ENST00000470243 DDX11L8A8MPP1 907 aa8.3□□□□□ -1.08
SRRM1-208ENST00000470243 RNF40O75150 1001 aa8.3□□□□□ -1.08
SRRM1-208ENST00000470243 MYSM1Q5VVJ2 828 aa8.3□□□□□ -1.08
SRRM1-208ENST00000470243 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
SRRM1-208ENST00000470243 CD46P15529 392 aa8.29□□□□□ -1.08
SRRM1-208ENST00000470243 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
SRRM1-208ENST00000470243 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-208ENST00000470243 TBC1D2Q9BYX2 928 aa8.29□□□□□ -1.08
SRRM1-208ENST00000470243 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
SRRM1-208ENST00000470243 IL21Q9HBE4 155 aa8.29□□□□□ -1.08
SRRM1-208ENST00000470243 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
SRRM1-208ENST00000470243 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
SRRM1-208ENST00000470243 SULF1Q8IWU6 871 aa8.27□□□□□ -1.09
SRRM1-208ENST00000470243 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.27□□□□□ -1.09
SRRM1-208ENST00000470243 ZNF787Q6DD87 383 aa8.26□□□□□ -1.09
SRRM1-208ENST00000470243 SPIRE2Q8WWL2 714 aa8.26□□□□□ -1.09
SRRM1-208ENST00000470243 ATP1B4Q9UN42 357 aaPredicted RBP8.26□□□□□ -1.09
SRRM1-208ENST00000470243 V9GY48 417 aaPredicted RBP8.26□□□□□ -1.09
SRRM1-208ENST00000470243 APLP1P51693 650 aa8.25□□□□□ -1.09
SRRM1-208ENST00000470243 SWT1Q5T5J6 900 aaKnown RBP8.25□□□□□ -1.09
SRRM1-208ENST00000470243 RDH13Q8NBN7 331 aa8.25□□□□□ -1.09
SRRM1-208ENST00000470243 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
SRRM1-208ENST00000470243 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
SRRM1-208ENST00000470243 SUPT5HO00267 1087 aaKnown RBP8.23□□□□□ -1.09
SRRM1-208ENST00000470243 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
SRRM1-208ENST00000470243 HDGFP51858 240 aaKnown RBP8.22□□□□□ -1.09
SRRM1-208ENST00000470243 COPS2P61201 443 aa8.22□□□□□ -1.09
SRRM1-208ENST00000470243 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
SRRM1-208ENST00000470243 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
SRRM1-208ENST00000470243 NUTM1Q86Y26 1132 aa8.22□□□□□ -1.09
SRRM1-208ENST00000470243 MOXD2PA6NHM9 499 aa8.21□□□□□ -1.1
SRRM1-208ENST00000470243 RIC3Q7Z5B4 369 aa8.21□□□□□ -1.1
SRRM1-208ENST00000470243 SLC10A3P09131 477 aa8.2□□□□□ -1.1
SRRM1-208ENST00000470243 NDUFV2P19404 249 aa8.2□□□□□ -1.1
SRRM1-208ENST00000470243 FLIIQ13045 1269 aa8.2□□□□□ -1.1
SRRM1-208ENST00000470243 MCM6Q14566 821 aa8.2□□□□□ -1.1
SRRM1-208ENST00000470243 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
SRRM1-208ENST00000470243 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
SRRM1-208ENST00000470243 ZNF775Q96BV0 537 aaPredicted RBP8.2□□□□□ -1.1
SRRM1-208ENST00000470243 ZMYND15Q9H091 742 aa8.2□□□□□ -1.1
SRRM1-208ENST00000470243 SPTLC1O15269 473 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms