RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
TTC3-213ENST00000469939 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
TTC3-213ENST00000469939 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
TTC3-213ENST00000469939 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
TTC3-213ENST00000469939 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.58□□□□□ -1.04
TTC3-213ENST00000469939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.57□□□□□ -1.04
TTC3-213ENST00000469939 ITGBL1O95965 494 aaPredicted RBP8.57□□□□□ -1.04
TTC3-213ENST00000469939 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
TTC3-213ENST00000469939 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
TTC3-213ENST00000469939 SWT1Q5T5J6 900 aaKnown RBP8.56□□□□□ -1.04
TTC3-213ENST00000469939 NYAP1Q6ZVC0 841 aa8.56□□□□□ -1.04
TTC3-213ENST00000469939 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
TTC3-213ENST00000469939 PHOX2BQ99453 314 aa8.56□□□□□ -1.04
TTC3-213ENST00000469939 TMEM134Q9H6X4 195 aa8.56□□□□□ -1.04
TTC3-213ENST00000469939 ARXQ96QS3 562 aa8.55□□□□□ -1.04
TTC3-213ENST00000469939 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
TTC3-213ENST00000469939 KCNC4Q03721 635 aa8.54□□□□□ -1.04
TTC3-213ENST00000469939 RNF40O75150 1001 aa8.53□□□□□ -1.04
TTC3-213ENST00000469939 SLC4A3P48751 1232 aa8.53□□□□□ -1.04
TTC3-213ENST00000469939 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
TTC3-213ENST00000469939 TSR3Q9UJK0 312 aaKnown RBP8.53□□□□□ -1.04
TTC3-213ENST00000469939 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
TTC3-213ENST00000469939 Q6ZNB5 142 aa8.52□□□□□ -1.05
TTC3-213ENST00000469939 NLRP7Q8WX94 980 aa8.52□□□□□ -1.05
TTC3-213ENST00000469939 PPP4CP60510 307 aa8.51□□□□□ -1.05
TTC3-213ENST00000469939 AK7Q96M32 723 aa8.51□□□□□ -1.05
TTC3-213ENST00000469939 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
TTC3-213ENST00000469939 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
TTC3-213ENST00000469939 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
TTC3-213ENST00000469939 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
TTC3-213ENST00000469939 TRIM66O15016 1216 aa8.47□□□□□ -1.05
TTC3-213ENST00000469939 CLCN1P35523 988 aa8.46□□□□□ -1.06
TTC3-213ENST00000469939 AMHR2Q16671 573 aa8.46□□□□□ -1.06
TTC3-213ENST00000469939 RSPH4AQ5TD94 716 aa8.46□□□□□ -1.06
TTC3-213ENST00000469939 SULF1Q8IWU6 871 aa8.46□□□□□ -1.06
TTC3-213ENST00000469939 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
TTC3-213ENST00000469939 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
TTC3-213ENST00000469939 SLC10A3P09131 477 aa8.45□□□□□ -1.06
TTC3-213ENST00000469939 TTLL12Q14166 644 aaPredicted RBP8.44□□□□□ -1.06
TTC3-213ENST00000469939 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
TTC3-213ENST00000469939 APLP1P51693 650 aa8.43□□□□□ -1.06
TTC3-213ENST00000469939 C14orf37Q86TY3 774 aa8.43□□□□□ -1.06
TTC3-213ENST00000469939 RDH13Q8NBN7 331 aa8.43□□□□□ -1.06
TTC3-213ENST00000469939 PRR14Q9BWN1 585 aa8.43□□□□□ -1.06
TTC3-213ENST00000469939 CFHP08603 1231 aa8.42□□□□□ -1.06
TTC3-213ENST00000469939 REPIN1Q9BWE0 567 aaKnown RBP8.42□□□□□ -1.06
TTC3-213ENST00000469939 PDE4DQ08499 809 aa8.41□□□□□ -1.06
TTC3-213ENST00000469939 KMT5BQ4FZB7 885 aa8.41□□□□□ -1.06
TTC3-213ENST00000469939 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
TTC3-213ENST00000469939 LAPTM4AQ15012 233 aa8.4□□□□□ -1.06
TTC3-213ENST00000469939 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
TTC3-213ENST00000469939 PARP9Q8IXQ6 854 aa8.4□□□□□ -1.06
TTC3-213ENST00000469939 CD46P15529 392 aa8.39□□□□□ -1.07
TTC3-213ENST00000469939 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
TTC3-213ENST00000469939 GFRA3O60609 400 aa8.38□□□□□ -1.07
TTC3-213ENST00000469939 SSTR3P32745 418 aaPredicted RBP8.38□□□□□ -1.07
TTC3-213ENST00000469939 GCGRP47871 477 aa8.38□□□□□ -1.07
TTC3-213ENST00000469939 HOMEZQ8IX15 550 aa8.37□□□□□ -1.07
TTC3-213ENST00000469939 MTRQ99707 1265 aa8.36□□□□□ -1.07
TTC3-213ENST00000469939 PRKD2Q9BZL6 878 aa8.36□□□□□ -1.07
TTC3-213ENST00000469939 PCDHB3Q9Y5E6 796 aa8.36□□□□□ -1.07
TTC3-213ENST00000469939 BRPF1P55201 1214 aaPredicted RBP8.35□□□□□ -1.07
TTC3-213ENST00000469939 TJAP1Q5JTD0 557 aa8.35□□□□□ -1.07
TTC3-213ENST00000469939 IL21Q9HBE4 155 aa8.35□□□□□ -1.07
TTC3-213ENST00000469939 MS4A1P11836 297 aa8.33□□□□□ -1.08
TTC3-213ENST00000469939 COPS2P61201 443 aa8.33□□□□□ -1.08
TTC3-213ENST00000469939 FUT2Q10981 343 aa8.33□□□□□ -1.08
TTC3-213ENST00000469939 TRAF7Q6Q0C0 670 aa8.33□□□□□ -1.08
TTC3-213ENST00000469939 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
TTC3-213ENST00000469939 KDM4AO75164 1064 aa8.32□□□□□ -1.08
TTC3-213ENST00000469939 ATP6V1AP38606 617 aa8.32□□□□□ -1.08
TTC3-213ENST00000469939 PPP1R18Q6NYC8 613 aa8.32□□□□□ -1.08
TTC3-213ENST00000469939 PUS10Q3MIT2 529 aaKnown RBP8.31□□□□□ -1.08
TTC3-213ENST00000469939 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
TTC3-213ENST00000469939 USP46P62068 366 aa8.3□□□□□ -1.08
TTC3-213ENST00000469939 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
TTC3-213ENST00000469939 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
TTC3-213ENST00000469939 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
TTC3-213ENST00000469939 GPBP1L1Q9HC44 474 aaPredicted RBP8.3□□□□□ -1.08
TTC3-213ENST00000469939 ZPR1O75312 459 aa8.29□□□□□ -1.08
TTC3-213ENST00000469939 NR1I2O75469 434 aa8.29□□□□□ -1.08
TTC3-213ENST00000469939 MORN1Q5T089 497 aa8.29□□□□□ -1.08
TTC3-213ENST00000469939 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
TTC3-213ENST00000469939 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.29□□□□□ -1.08
TTC3-213ENST00000469939 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
TTC3-213ENST00000469939 SCUBE3Q8IX30 993 aa8.28□□□□□ -1.08
TTC3-213ENST00000469939 V9GY48 417 aaPredicted RBP8.28□□□□□ -1.08
TTC3-213ENST00000469939 HOXA2O43364 376 aa8.27□□□□□ -1.09
TTC3-213ENST00000469939 NEUROD2Q15784 382 aa8.27□□□□□ -1.09
TTC3-213ENST00000469939 SPIRE2Q8WWL2 714 aa8.27□□□□□ -1.09
TTC3-213ENST00000469939 GGCXP38435 758 aa8.26□□□□□ -1.09
TTC3-213ENST00000469939 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
TTC3-213ENST00000469939 SLC27A5Q9Y2P5 690 aa8.26□□□□□ -1.09
TTC3-213ENST00000469939 LCE2BO14633 110 aa8.25□□□□□ -1.09
TTC3-213ENST00000469939 NKX2-3Q8TAU0 364 aa8.25□□□□□ -1.09
TTC3-213ENST00000469939 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
TTC3-213ENST00000469939 TLL1O43897 1013 aa8.24□□□□□ -1.09
TTC3-213ENST00000469939 HLA-CQ95604 372 aa8.24□□□□□ -1.09
TTC3-213ENST00000469939 PDZRN3Q9UPQ7 1066 aa8.24□□□□□ -1.09
TTC3-213ENST00000469939 Q3C1V9 767 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms