RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
VPS8-220ENST00000469713 DNAJB2P25686 324 aa8.55□□□□□ -1.04
VPS8-220ENST00000469713 PBX2P40425 430 aa8.55□□□□□ -1.04
VPS8-220ENST00000469713 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
VPS8-220ENST00000469713 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
VPS8-220ENST00000469713 TMEM134Q9H6X4 195 aa8.54□□□□□ -1.04
VPS8-220ENST00000469713 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
VPS8-220ENST00000469713 RABGEF1Q9UJ41 708 aa8.53□□□□□ -1.04
VPS8-220ENST00000469713 VPS9D1Q9Y2B5 631 aa8.52□□□□□ -1.05
VPS8-220ENST00000469713 DDX11L8A8MPP1 907 aa8.51□□□□□ -1.05
VPS8-220ENST00000469713 SH3D19Q5HYK7 790 aa8.51□□□□□ -1.05
VPS8-220ENST00000469713 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
VPS8-220ENST00000469713 CD46P15529 392 aa8.5□□□□□ -1.05
VPS8-220ENST00000469713 C14orf37Q86TY3 774 aa8.5□□□□□ -1.05
VPS8-220ENST00000469713 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
VPS8-220ENST00000469713 PCMTD1Q96MG8 357 aaPredicted RBP8.49□□□□□ -1.05
VPS8-220ENST00000469713 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
VPS8-220ENST00000469713 SWT1Q5T5J6 900 aaKnown RBP8.48□□□□□ -1.05
VPS8-220ENST00000469713 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
VPS8-220ENST00000469713 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
VPS8-220ENST00000469713 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
VPS8-220ENST00000469713 POLR3EQ9NVU0 708 aa8.47□□□□□ -1.05
VPS8-220ENST00000469713 FAM98CQ17RN3 349 aaKnown RBP8.46□□□□□ -1.06
VPS8-220ENST00000469713 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.06
VPS8-220ENST00000469713 RDH13Q8NBN7 331 aa8.46□□□□□ -1.06
VPS8-220ENST00000469713 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
VPS8-220ENST00000469713 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
VPS8-220ENST00000469713 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
VPS8-220ENST00000469713 TK2O00142 265 aa8.45□□□□□ -1.06
VPS8-220ENST00000469713 NBPF3Q9H094 633 aa8.45□□□□□ -1.06
VPS8-220ENST00000469713 ADGRD1Q6QNK2 874 aa8.44□□□□□ -1.06
VPS8-220ENST00000469713 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
VPS8-220ENST00000469713 SLC10A3P09131 477 aa8.43□□□□□ -1.06
VPS8-220ENST00000469713 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
VPS8-220ENST00000469713 DIXDC1Q155Q3 683 aa8.43□□□□□ -1.06
VPS8-220ENST00000469713 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
VPS8-220ENST00000469713 LAPTM4BQ86VI4 370 aa8.43□□□□□ -1.06
VPS8-220ENST00000469713 NUTM1Q86Y26 1132 aa8.43□□□□□ -1.06
VPS8-220ENST00000469713 HRO43593 1189 aa8.42□□□□□ -1.06
VPS8-220ENST00000469713 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
VPS8-220ENST00000469713 HDGFP51858 240 aaKnown RBP8.41□□□□□ -1.06
VPS8-220ENST00000469713 MRPL50Q8N5N7 158 aaKnown RBP8.41□□□□□ -1.06
VPS8-220ENST00000469713 ZFRQ96KR1 1074 aaKnown RBP8.41□□□□□ -1.06
VPS8-220ENST00000469713 HCSTQ9UBK5 93 aa8.41□□□□□ -1.06
VPS8-220ENST00000469713 MOXD2PA6NHM9 499 aa8.4□□□□□ -1.06
VPS8-220ENST00000469713 GCGRP47871 477 aa8.4□□□□□ -1.06
VPS8-220ENST00000469713 RSPH4AQ5TD94 716 aa8.4□□□□□ -1.06
VPS8-220ENST00000469713 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
VPS8-220ENST00000469713 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
VPS8-220ENST00000469713 RNF40O75150 1001 aa8.39□□□□□ -1.07
VPS8-220ENST00000469713 KDM4AO75164 1064 aa8.39□□□□□ -1.07
VPS8-220ENST00000469713 NDUFV2P19404 249 aa8.39□□□□□ -1.07
VPS8-220ENST00000469713 RSBN1LQ6PCB5 846 aaPredicted RBP8.39□□□□□ -1.07
VPS8-220ENST00000469713 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
VPS8-220ENST00000469713 SPTLC1O15269 473 aa8.38□□□□□ -1.07
VPS8-220ENST00000469713 SLC4A3P48751 1232 aa8.38□□□□□ -1.07
VPS8-220ENST00000469713 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
VPS8-220ENST00000469713 FBXO31Q5XUX0 539 aaPredicted RBP8.37□□□□□ -1.07
VPS8-220ENST00000469713 HOXA2O43364 376 aa8.36□□□□□ -1.07
VPS8-220ENST00000469713 CFHP08603 1231 aa8.36□□□□□ -1.07
VPS8-220ENST00000469713 USP46P62068 366 aa8.35□□□□□ -1.07
VPS8-220ENST00000469713 HLA-CQ95604 372 aa8.35□□□□□ -1.07
VPS8-220ENST00000469713 LRCH3Q96II8 777 aa8.35□□□□□ -1.07
VPS8-220ENST00000469713 STAC3Q96MF2 364 aa8.35□□□□□ -1.07
VPS8-220ENST00000469713 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
VPS8-220ENST00000469713 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
VPS8-220ENST00000469713 GUCA2AQ02747 115 aa8.34□□□□□ -1.07
VPS8-220ENST00000469713 FLIIQ13045 1269 aa8.34□□□□□ -1.07
VPS8-220ENST00000469713 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
VPS8-220ENST00000469713 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.34□□□□□ -1.07
VPS8-220ENST00000469713 GOLGA8CPA6NN73 597 aa8.33□□□□□ -1.08
VPS8-220ENST00000469713 GJA5P36382 358 aa8.33□□□□□ -1.08
VPS8-220ENST00000469713 RFC5P40937 340 aa8.33□□□□□ -1.08
VPS8-220ENST00000469713 QPCTQ16769 361 aa8.33□□□□□ -1.08
VPS8-220ENST00000469713 FDX1P10109 184 aa8.32□□□□□ -1.08
VPS8-220ENST00000469713 FUT2Q10981 343 aa8.32□□□□□ -1.08
VPS8-220ENST00000469713 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
VPS8-220ENST00000469713 ANKK1Q8NFD2 765 aa8.32□□□□□ -1.08
VPS8-220ENST00000469713 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
VPS8-220ENST00000469713 PCDHGC3Q9UN70 934 aa8.32□□□□□ -1.08
VPS8-220ENST00000469713 LILRB3O75022 631 aa8.31□□□□□ -1.08
VPS8-220ENST00000469713 BCAMP50895 628 aa8.31□□□□□ -1.08
VPS8-220ENST00000469713 MCM6Q14566 821 aa8.31□□□□□ -1.08
VPS8-220ENST00000469713 SOWAHBA6NEL2 793 aa8.3□□□□□ -1.08
VPS8-220ENST00000469713 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
VPS8-220ENST00000469713 RTL5Q5HYW3 569 aaPredicted RBP8.3□□□□□ -1.08
VPS8-220ENST00000469713 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
VPS8-220ENST00000469713 NUTM2BA6NNL0 878 aaPredicted RBP8.29□□□□□ -1.08
VPS8-220ENST00000469713 NUTM2EB1AL46 878 aaPredicted RBP8.29□□□□□ -1.08
VPS8-220ENST00000469713 HRCP23327 699 aa8.29□□□□□ -1.08
VPS8-220ENST00000469713 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
VPS8-220ENST00000469713 NUTM2AQ8IVF1 878 aaPredicted RBP8.29□□□□□ -1.08
VPS8-220ENST00000469713 WNT2BQ93097 391 aa8.29□□□□□ -1.08
VPS8-220ENST00000469713 HPS5Q9UPZ3 1129 aa8.29□□□□□ -1.08
VPS8-220ENST00000469713 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
VPS8-220ENST00000469713 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
VPS8-220ENST00000469713 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
VPS8-220ENST00000469713 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
VPS8-220ENST00000469713 PRPF38BQ5VTL8 546 aaKnown RBP8.28□□□□□ -1.08
VPS8-220ENST00000469713 NECTIN2Q92692 538 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms