RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
CBWD3-205ENST00000469687 SYNMO15061 1565 aa19.67■□□□□ 0.74
CBWD3-205ENST00000469687 NEURL4Q96JN8 1562 aa19.67■□□□□ 0.74
CBWD3-205ENST00000469687 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
CBWD3-205ENST00000469687 CDCA7LQ96GN5 454 aa19.66■□□□□ 0.74
CBWD3-205ENST00000469687 BLMP54132 1417 aaPredicted RBP19.65■□□□□ 0.74
CBWD3-205ENST00000469687 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
CBWD3-205ENST00000469687 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.74
CBWD3-205ENST00000469687 FRMPD1Q5SYB0 1578 aa19.64■□□□□ 0.73
CBWD3-205ENST00000469687 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
CBWD3-205ENST00000469687 MYOM2P54296 1465 aa19.64■□□□□ 0.73
CBWD3-205ENST00000469687 MYT1Q01538 1121 aa19.63■□□□□ 0.73
CBWD3-205ENST00000469687 ANP32EQ9BTT0 268 aa19.63■□□□□ 0.73
CBWD3-205ENST00000469687 POGZQ7Z3K3 1410 aa19.63■□□□□ 0.73
CBWD3-205ENST00000469687 MSH5O43196 834 aa19.62■□□□□ 0.73
CBWD3-205ENST00000469687 KDM5AP29375 1690 aaKnown RBP19.62■□□□□ 0.73
CBWD3-205ENST00000469687 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
CBWD3-205ENST00000469687 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
CBWD3-205ENST00000469687 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
CBWD3-205ENST00000469687 PPP2R1AP30153 589 aa19.61■□□□□ 0.73
CBWD3-205ENST00000469687 RRP1P56182 461 aaKnown RBP19.61■□□□□ 0.73
CBWD3-205ENST00000469687 CDCA8Q53HL2 280 aa19.6■□□□□ 0.73
CBWD3-205ENST00000469687 RCAN3Q9UKA8 241 aa19.6■□□□□ 0.73
CBWD3-205ENST00000469687 GGT6Q6P531 493 aa19.6■□□□□ 0.73
CBWD3-205ENST00000469687 ADAMTS8Q9UP79 889 aa19.59■□□□□ 0.73
CBWD3-205ENST00000469687 NPATQ14207 1427 aa19.59■□□□□ 0.73
CBWD3-205ENST00000469687 ASXL1Q8IXJ9 1541 aa19.59■□□□□ 0.73
CBWD3-205ENST00000469687 CFAP74Q9C0B2 1584 aa19.59■□□□□ 0.73
CBWD3-205ENST00000469687 HECW2Q9P2P5 1572 aa19.59■□□□□ 0.73
CBWD3-205ENST00000469687 CHGAP10645 457 aaKnown RBP19.59■□□□□ 0.73
CBWD3-205ENST00000469687 PDE3BQ13370 1112 aa19.59■□□□□ 0.73
CBWD3-205ENST00000469687 ERVK-7P63135 1459 aa19.58■□□□□ 0.73
CBWD3-205ENST00000469687 ADGRB3O60242 1522 aa19.58■□□□□ 0.72
CBWD3-205ENST00000469687 NOS1P29475 1434 aa19.58■□□□□ 0.72
CBWD3-205ENST00000469687 ZMYM4Q5VZL5 1548 aa19.57■□□□□ 0.72
CBWD3-205ENST00000469687 MLH3Q9UHC1 1453 aa19.57■□□□□ 0.72
CBWD3-205ENST00000469687 NRXN1Q9ULB1 1477 aa19.57■□□□□ 0.72
CBWD3-205ENST00000469687 INSRP06213 1382 aa19.57■□□□□ 0.72
CBWD3-205ENST00000469687 FANCIQ9NVI1 1328 aa19.56■□□□□ 0.72
CBWD3-205ENST00000469687 EXOC6Q8TAG9 804 aa19.55■□□□□ 0.72
CBWD3-205ENST00000469687 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
CBWD3-205ENST00000469687 PPLO60437 1756 aa19.54■□□□□ 0.72
CBWD3-205ENST00000469687 SIGLEC1Q9BZZ2 1709 aa19.52■□□□□ 0.72
CBWD3-205ENST00000469687 MYO3AQ8NEV4 1616 aa19.52■□□□□ 0.71
CBWD3-205ENST00000469687 ABCC3O15438 1527 aa19.51■□□□□ 0.71
CBWD3-205ENST00000469687 WDR43Q15061 677 aaKnown RBP eCLIP19.5■□□□□ 0.71
CBWD3-205ENST00000469687 CARD14Q9BXL6 1004 aa19.5■□□□□ 0.71
CBWD3-205ENST00000469687 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
CBWD3-205ENST00000469687 PIK3C2GO75747 1445 aa19.5■□□□□ 0.71
CBWD3-205ENST00000469687 PLIN1O60240 522 aa19.49■□□□□ 0.71
CBWD3-205ENST00000469687 CAMSAP1Q5T5Y3 1602 aa19.49■□□□□ 0.71
CBWD3-205ENST00000469687 NPC1L1Q9UHC9 1359 aa19.49■□□□□ 0.71
CBWD3-205ENST00000469687 TRAK1Q9UPV9 953 aa19.49■□□□□ 0.71
CBWD3-205ENST00000469687 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
CBWD3-205ENST00000469687 TMEM132EQ6IEE7 984 aa19.47■□□□□ 0.71
CBWD3-205ENST00000469687 ZC3H13Q5T200 1668 aaKnown RBP19.46■□□□□ 0.71
CBWD3-205ENST00000469687 CENPJQ9HC77 1338 aaPredicted RBP19.46■□□□□ 0.71
CBWD3-205ENST00000469687 ADGRB1O14514 1584 aa19.46■□□□□ 0.71
CBWD3-205ENST00000469687 DIP2CQ9Y2E4 1556 aa19.46■□□□□ 0.71
CBWD3-205ENST00000469687 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
CBWD3-205ENST00000469687 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.7
CBWD3-205ENST00000469687 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
CBWD3-205ENST00000469687 NEO1Q92859 1461 aa19.45■□□□□ 0.7
CBWD3-205ENST00000469687 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
CBWD3-205ENST00000469687 SBNO2Q9Y2G9 1366 aa19.44■□□□□ 0.7
CBWD3-205ENST00000469687 RICTORQ6R327 1708 aa19.43■□□□□ 0.7
CBWD3-205ENST00000469687 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
CBWD3-205ENST00000469687 SLC24A1O60721 1099 aa19.42■□□□□ 0.7
CBWD3-205ENST00000469687 PIK3C2BO00750 1634 aa19.41■□□□□ 0.7
CBWD3-205ENST00000469687 DUSP27Q5VZP5 1158 aa19.41■□□□□ 0.7
CBWD3-205ENST00000469687 YEATS2Q9ULM3 1422 aa19.4■□□□□ 0.7
CBWD3-205ENST00000469687 SLC12A5Q9H2X9 1139 aa19.39■□□□□ 0.69
CBWD3-205ENST00000469687 C20orf194Q5TEA3 1177 aa19.39■□□□□ 0.69
CBWD3-205ENST00000469687 CRBNQ96SW2 442 aa19.39■□□□□ 0.69
CBWD3-205ENST00000469687 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
CBWD3-205ENST00000469687 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
CBWD3-205ENST00000469687 GLI2P10070 1586 aa19.38■□□□□ 0.69
CBWD3-205ENST00000469687 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
CBWD3-205ENST00000469687 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
CBWD3-205ENST00000469687 MYO5BQ9ULV0 1848 aa19.37■□□□□ 0.69
CBWD3-205ENST00000469687 APAF1O14727 1248 aa19.36■□□□□ 0.69
CBWD3-205ENST00000469687 GOLGA2Q08379 1002 aa19.36■□□□□ 0.69
CBWD3-205ENST00000469687 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
CBWD3-205ENST00000469687 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
CBWD3-205ENST00000469687 IDI1Q13907 227 aa19.34■□□□□ 0.69
CBWD3-205ENST00000469687 TNNT2P45379 298 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-205ENST00000469687 SLFN5Q08AF3 891 aa19.33■□□□□ 0.69
CBWD3-205ENST00000469687 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
CBWD3-205ENST00000469687 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
CBWD3-205ENST00000469687 SHPRHQ149N8 1683 aa19.31■□□□□ 0.68
CBWD3-205ENST00000469687 TULP4Q9NRJ4 1543 aa19.31■□□□□ 0.68
CBWD3-205ENST00000469687 SKAP1Q86WV1 359 aa19.31■□□□□ 0.68
CBWD3-205ENST00000469687 ARHGAP31Q2M1Z3 1444 aa19.31■□□□□ 0.68
CBWD3-205ENST00000469687 VGFO15240 615 aaPredicted RBP19.3■□□□□ 0.68
CBWD3-205ENST00000469687 ERICH6Q7L0X2 663 aa19.3■□□□□ 0.68
CBWD3-205ENST00000469687 SAFB2Q14151 953 aaKnown RBP eCLIP19.3■□□□□ 0.68
CBWD3-205ENST00000469687 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
CBWD3-205ENST00000469687 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
CBWD3-205ENST00000469687 TRMT2AQ8IZ69 625 aaKnown RBP19.29■□□□□ 0.68
CBWD3-205ENST00000469687 PREX1Q8TCU6 1659 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms