RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 MSH6P52701 1360 aa19.46■□□□□ 0.71
GAPVD1-214ENST00000469528 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
GAPVD1-214ENST00000469528 SLAIN2Q9P270 581 aa19.45■□□□□ 0.7
GAPVD1-214ENST00000469528 TBX22Q9Y458 520 aa19.45■□□□□ 0.7
GAPVD1-214ENST00000469528 ADGRB3O60242 1522 aa19.44■□□□□ 0.7
GAPVD1-214ENST00000469528 PLEKHG1Q9ULL1 1385 aa19.43■□□□□ 0.7
GAPVD1-214ENST00000469528 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
GAPVD1-214ENST00000469528 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
GAPVD1-214ENST00000469528 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
GAPVD1-214ENST00000469528 RIMS2Q9UQ26 1411 aa19.41■□□□□ 0.7
GAPVD1-214ENST00000469528 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
GAPVD1-214ENST00000469528 NCOA3Q9Y6Q9 1424 aa19.4■□□□□ 0.7
GAPVD1-214ENST00000469528 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
GAPVD1-214ENST00000469528 RGS17Q9UGC6 210 aaPredicted RBP19.39■□□□□ 0.69
GAPVD1-214ENST00000469528 ZFYVE9O95405 1425 aa19.37■□□□□ 0.69
GAPVD1-214ENST00000469528 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
GAPVD1-214ENST00000469528 C19orf44Q9H6X5 657 aa19.36■□□□□ 0.69
GAPVD1-214ENST00000469528 ATF3P18847 181 aa19.35■□□□□ 0.69
GAPVD1-214ENST00000469528 NUP155O75694 1391 aa19.34■□□□□ 0.69
GAPVD1-214ENST00000469528 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
GAPVD1-214ENST00000469528 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
GAPVD1-214ENST00000469528 ROBO1Q9Y6N7 1651 aa19.33■□□□□ 0.69
GAPVD1-214ENST00000469528 JCADQ9P266 1359 aa19.32■□□□□ 0.68
GAPVD1-214ENST00000469528 ITGAEP38570 1179 aa19.32■□□□□ 0.68
GAPVD1-214ENST00000469528 NUTM2DQ5VT03 806 aaPredicted RBP19.32■□□□□ 0.68
GAPVD1-214ENST00000469528 GCC2Q8IWJ2 1684 aa19.32■□□□□ 0.68
GAPVD1-214ENST00000469528 TMEM131LA2VDJ0 1609 aa19.32■□□□□ 0.68
GAPVD1-214ENST00000469528 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
GAPVD1-214ENST00000469528 UNC13BO14795 1591 aa19.29■□□□□ 0.68
GAPVD1-214ENST00000469528 POTEAQ6S8J7 498 aa19.29■□□□□ 0.68
GAPVD1-214ENST00000469528 AMOTL2Q9Y2J4 779 aa19.29■□□□□ 0.68
GAPVD1-214ENST00000469528 ZNF326Q5BKZ1 582 aaKnown RBP19.27■□□□□ 0.68
GAPVD1-214ENST00000469528 SPATA31A6Q5VVP1 1343 aa19.26■□□□□ 0.67
GAPVD1-214ENST00000469528 MYO5BQ9ULV0 1848 aa19.26■□□□□ 0.67
GAPVD1-214ENST00000469528 ADAMTS13Q76LX8 1427 aa19.25■□□□□ 0.67
GAPVD1-214ENST00000469528 DIP2AQ14689 1571 aa19.25■□□□□ 0.67
GAPVD1-214ENST00000469528 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
GAPVD1-214ENST00000469528 E9PCH4 1651 aa19.24■□□□□ 0.67
GAPVD1-214ENST00000469528 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
GAPVD1-214ENST00000469528 PHLPP1O60346 1717 aa19.24■□□□□ 0.67
GAPVD1-214ENST00000469528 IQGAP3Q86VI3 1631 aa19.24■□□□□ 0.67
GAPVD1-214ENST00000469528 TRPM2O94759 1503 aa19.21■□□□□ 0.67
GAPVD1-214ENST00000469528 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
GAPVD1-214ENST00000469528 BRINP3Q76B58 766 aa19.17■□□□□ 0.66
GAPVD1-214ENST00000469528 DCCP43146 1447 aa19.17■□□□□ 0.66
GAPVD1-214ENST00000469528 LRRC59Q96AG4 307 aaKnown RBP19.16■□□□□ 0.66
GAPVD1-214ENST00000469528 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.16■□□□□ 0.66
GAPVD1-214ENST00000469528 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
GAPVD1-214ENST00000469528 PTPRUQ92729 1446 aa19.14■□□□□ 0.65
GAPVD1-214ENST00000469528 COL16A1Q07092 1604 aaPredicted RBP19.13■□□□□ 0.65
GAPVD1-214ENST00000469528 AHDC1Q5TGY3 1603 aaPredicted RBP19.12■□□□□ 0.65
GAPVD1-214ENST00000469528 RXRBP28702 533 aa19.12■□□□□ 0.65
GAPVD1-214ENST00000469528 NUTM2BA6NNL0 878 aaPredicted RBP19.11■□□□□ 0.65
GAPVD1-214ENST00000469528 NUTM2EB1AL46 878 aaPredicted RBP19.11■□□□□ 0.65
GAPVD1-214ENST00000469528 NUTM2AQ8IVF1 878 aaPredicted RBP19.11■□□□□ 0.65
GAPVD1-214ENST00000469528 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
GAPVD1-214ENST00000469528 SETBP1Q9Y6X0 1596 aa19.1■□□□□ 0.65
GAPVD1-214ENST00000469528 METP08581 1390 aa19.09■□□□□ 0.65
GAPVD1-214ENST00000469528 RPGRIP1LQ68CZ1 1315 aa19.09■□□□□ 0.65
GAPVD1-214ENST00000469528 SPHKAPQ2M3C7 1700 aa19.08■□□□□ 0.65
GAPVD1-214ENST00000469528 SETD5Q9C0A6 1442 aa19.07■□□□□ 0.64
GAPVD1-214ENST00000469528 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
GAPVD1-214ENST00000469528 SLC4A1APQ9BWU0 796 aaKnown RBP19.05■□□□□ 0.64
GAPVD1-214ENST00000469528 MST1RQ04912 1400 aa19.05■□□□□ 0.64
GAPVD1-214ENST00000469528 LRP6O75581 1613 aa19.04■□□□□ 0.64
GAPVD1-214ENST00000469528 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
GAPVD1-214ENST00000469528 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
GAPVD1-214ENST00000469528 ASXL1Q8IXJ9 1541 aa19.03■□□□□ 0.64
GAPVD1-214ENST00000469528 AFF2P51816 1311 aa19.02■□□□□ 0.64
GAPVD1-214ENST00000469528 NAIPQ13075 1403 aa19.02■□□□□ 0.64
GAPVD1-214ENST00000469528 UPF1Q92900 1129 aaKnown RBP eCLIP19.02■□□□□ 0.64
GAPVD1-214ENST00000469528 NRXN3Q9Y4C0 1643 aa19.02■□□□□ 0.64
GAPVD1-214ENST00000469528 XRN1Q8IZH2 1706 aaKnown RBP19.02■□□□□ 0.63
GAPVD1-214ENST00000469528 QTRT2Q9H974 415 aaKnown RBP19.01■□□□□ 0.63
GAPVD1-214ENST00000469528 KIF1BO60333 1816 aa19.01■□□□□ 0.63
GAPVD1-214ENST00000469528 C8orf37Q96NL8 207 aa19■□□□□ 0.63
GAPVD1-214ENST00000469528 NEXMIFQ5QGS0 1516 aa19■□□□□ 0.63
GAPVD1-214ENST00000469528 RBM6P78332 1123 aaKnown RBP18.99■□□□□ 0.63
GAPVD1-214ENST00000469528 NGLY1Q96IV0 654 aa18.99■□□□□ 0.63
GAPVD1-214ENST00000469528 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
GAPVD1-214ENST00000469528 CLTCL1P53675 1640 aa18.97■□□□□ 0.63
GAPVD1-214ENST00000469528 DDX17Q92841 729 aaKnown RBP18.97■□□□□ 0.63
GAPVD1-214ENST00000469528 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
GAPVD1-214ENST00000469528 HFM1A2PYH4 1435 aa18.96■□□□□ 0.63
GAPVD1-214ENST00000469528 PTCH1Q13635 1447 aa18.96■□□□□ 0.63
GAPVD1-214ENST00000469528 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
GAPVD1-214ENST00000469528 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
GAPVD1-214ENST00000469528 NHSL1Q5SYE7 1610 aa18.94■□□□□ 0.62
GAPVD1-214ENST00000469528 ORAI2Q96SN7 254 aa18.94■□□□□ 0.62
GAPVD1-214ENST00000469528 SOS2Q07890 1332 aaPredicted RBP18.94■□□□□ 0.62
GAPVD1-214ENST00000469528 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
GAPVD1-214ENST00000469528 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
GAPVD1-214ENST00000469528 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
GAPVD1-214ENST00000469528 ESCO1Q5FWF5 840 aa18.91■□□□□ 0.62
GAPVD1-214ENST00000469528 FOXD1Q16676 465 aa18.9■□□□□ 0.62
GAPVD1-214ENST00000469528 USP21Q9UK80 565 aa18.9■□□□□ 0.62
GAPVD1-214ENST00000469528 TRPC5Q9UL62 973 aaPredicted RBP18.9■□□□□ 0.62
GAPVD1-214ENST00000469528 NPHP3Q7Z494 1330 aa18.9■□□□□ 0.62
GAPVD1-214ENST00000469528 RGL3Q3MIN7 710 aa18.89■□□□□ 0.61
GAPVD1-214ENST00000469528 LRPPRCP42704 1394 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms