RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 GBP4Q96PP9 640 aa11.39□□□□□ -0.59
SMARCE1-207ENST00000469334 RTEL1-TNFRSF6BF6WH68 1400 aa11.39□□□□□ -0.59
SMARCE1-207ENST00000469334 SHROOM2Q13796 1616 aa11.38□□□□□ -0.59
SMARCE1-207ENST00000469334 PDE3AQ14432 1141 aa11.38□□□□□ -0.59
SMARCE1-207ENST00000469334 CCDC94Q9BW85 323 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-207ENST00000469334 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-207ENST00000469334 COL17A1Q9UMD9 1497 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-207ENST00000469334 TRPM1Q7Z4N2 1603 aa11.38□□□□□ -0.59
SMARCE1-207ENST00000469334 ITSN2Q9NZM3 1697 aa11.37□□□□□ -0.59
SMARCE1-207ENST00000469334 ABCC5O15440 1437 aa11.37□□□□□ -0.59
SMARCE1-207ENST00000469334 UQCRHLA0A096LP55 91 aa11.37□□□□□ -0.59
SMARCE1-207ENST00000469334 UQCRHP07919 91 aa11.37□□□□□ -0.59
SMARCE1-207ENST00000469334 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-207ENST00000469334 MCM5P33992 734 aa11.37□□□□□ -0.59
SMARCE1-207ENST00000469334 PLEKHH1Q9ULM0 1364 aa11.37□□□□□ -0.59
SMARCE1-207ENST00000469334 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 NASPP49321 788 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 PMFBP1Q8TBY8 1022 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 CROCC2H7BZ55 1655 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 ABCC2Q92887 1545 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 IGHDP01880 384 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 DDIT3P35638 169 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 GAS2L3Q86XJ1 694 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 HSCBQ8IWL3 235 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 TRMT2AQ8IZ69 625 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 R3HCC1Q9Y3T6 440 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-207ENST00000469334 ARHGAP31Q2M1Z3 1444 aa11.35□□□□□ -0.59
SMARCE1-207ENST00000469334 ST20-MTHFSA0A0A6YYL1 179 aa11.35□□□□□ -0.59
SMARCE1-207ENST00000469334 LETM1O95202 739 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-207ENST00000469334 SLFN5Q08AF3 891 aa11.35□□□□□ -0.59
SMARCE1-207ENST00000469334 NOL7Q9UMY1 257 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-207ENST00000469334 SASS6Q6UVJ0 657 aa11.35□□□□□ -0.59
SMARCE1-207ENST00000469334 ADGRL2O95490 1459 aa11.34□□□□□ -0.59
SMARCE1-207ENST00000469334 KIAA0586Q9BVV6 1533 aa11.34□□□□□ -0.59
SMARCE1-207ENST00000469334 ZNF326Q5BKZ1 582 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-207ENST00000469334 ZHX1Q9UKY1 873 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-207ENST00000469334 GTF2E1P29083 439 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-207ENST00000469334 NGEFQ8N5V2 710 aa11.33□□□□□ -0.6
SMARCE1-207ENST00000469334 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-207ENST00000469334 KDM5DQ9BY66 1539 aa11.33□□□□□ -0.6
SMARCE1-207ENST00000469334 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
SMARCE1-207ENST00000469334 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
SMARCE1-207ENST00000469334 SNX21Q969T3 373 aa11.32□□□□□ -0.6
SMARCE1-207ENST00000469334 STAC3Q96MF2 364 aa11.32□□□□□ -0.6
SMARCE1-207ENST00000469334 EIF4G3O43432 1585 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-207ENST00000469334 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
SMARCE1-207ENST00000469334 C22orf23Q9BZE7 217 aa11.32□□□□□ -0.6
SMARCE1-207ENST00000469334 RAB3GAP1Q15042 981 aa11.31□□□□□ -0.6
SMARCE1-207ENST00000469334 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
SMARCE1-207ENST00000469334 IPO4Q8TEX9 1081 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-207ENST00000469334 PRDM15P57071 1507 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-207ENST00000469334 GOLGA6L22H0YM25 854 aa11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 TNPO1Q92973 898 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 NAP1L2Q9ULW6 460 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 CLEC17AQ6ZS10 378 aa11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 ADAMTS8Q9UP79 889 aa11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 WDR62O43379 1518 aa11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 PIK3C2GO75747 1445 aa11.3□□□□□ -0.6
SMARCE1-207ENST00000469334 EIF2AK4Q9P2K8 1649 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 E9PSI1 815 aa11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 ZNF445P59923 1031 aa11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 KLHL40Q2TBA0 621 aa11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 GPRASP1Q5JY77 1395 aa11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 RBM25P49756 843 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
SMARCE1-207ENST00000469334 PRDM10Q9NQV6 1147 aa11.28□□□□□ -0.6
SMARCE1-207ENST00000469334 HSP90AB1P08238 724 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-207ENST00000469334 CCDC39Q9UFE4 941 aa11.26□□□□□ -0.61
SMARCE1-207ENST00000469334 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
SMARCE1-207ENST00000469334 PKD2Q13563 968 aa11.26□□□□□ -0.61
SMARCE1-207ENST00000469334 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-207ENST00000469334 MYRIPQ8NFW9 859 aa11.26□□□□□ -0.61
SMARCE1-207ENST00000469334 RWDD1Q9H446 243 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-207ENST00000469334 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
SMARCE1-207ENST00000469334 PRAG1Q86YV5 1406 aa11.25□□□□□ -0.61
SMARCE1-207ENST00000469334 PRIMPOLQ96LW4 560 aa11.25□□□□□ -0.61
SMARCE1-207ENST00000469334 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-207ENST00000469334 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-207ENST00000469334 SYNMO15061 1565 aa11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 BCAR3O75815 825 aa11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 XPCQ01831 940 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 ERBINQ96RT1 1412 aa11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 CADPSQ9ULU8 1353 aa11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMARCE1-207ENST00000469334 TMEM51Q9NW97 253 aa11.23□□□□□ -0.61
SMARCE1-207ENST00000469334 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-207ENST00000469334 LAMC3Q9Y6N6 1575 aa11.22□□□□□ -0.61
SMARCE1-207ENST00000469334 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-207ENST00000469334 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms