RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ITGAEP38570 1179 aa18.95■□□□□ 0.62
HDAC3-204ENST00000469207 ADGRB3O60242 1522 aa18.95■□□□□ 0.62
HDAC3-204ENST00000469207 KDM5AP29375 1690 aaKnown RBP18.94■□□□□ 0.62
HDAC3-204ENST00000469207 FAM135BQ49AJ0 1406 aa18.93■□□□□ 0.62
HDAC3-204ENST00000469207 RIMS2Q9UQ26 1411 aa18.91■□□□□ 0.62
HDAC3-204ENST00000469207 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
HDAC3-204ENST00000469207 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
HDAC3-204ENST00000469207 ZFYVE9O95405 1425 aa18.91■□□□□ 0.62
HDAC3-204ENST00000469207 RPRD2Q5VT52 1461 aaKnown RBP18.89■□□□□ 0.61
HDAC3-204ENST00000469207 SLAIN2Q9P270 581 aa18.88■□□□□ 0.61
HDAC3-204ENST00000469207 PLEKHG1Q9ULL1 1385 aa18.88■□□□□ 0.61
HDAC3-204ENST00000469207 TMEM131LA2VDJ0 1609 aa18.87■□□□□ 0.61
HDAC3-204ENST00000469207 HDGFP51858 240 aaKnown RBP18.87■□□□□ 0.61
HDAC3-204ENST00000469207 GCC2Q8IWJ2 1684 aa18.87■□□□□ 0.61
HDAC3-204ENST00000469207 ROBO1Q9Y6N7 1651 aa18.86■□□□□ 0.61
HDAC3-204ENST00000469207 POTEAQ6S8J7 498 aa18.86■□□□□ 0.61
HDAC3-204ENST00000469207 TBX22Q9Y458 520 aa18.86■□□□□ 0.61
HDAC3-204ENST00000469207 MSH6P52701 1360 aa18.85■□□□□ 0.61
HDAC3-204ENST00000469207 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
HDAC3-204ENST00000469207 NUP155O75694 1391 aa18.84■□□□□ 0.61
HDAC3-204ENST00000469207 E9PCH4 1651 aa18.84■□□□□ 0.61
HDAC3-204ENST00000469207 NKTRP30414 1462 aaKnown RBP18.84■□□□□ 0.61
HDAC3-204ENST00000469207 UNC13BO14795 1591 aa18.83■□□□□ 0.6
HDAC3-204ENST00000469207 CHD2O14647 1828 aaKnown RBP18.83■□□□□ 0.6
HDAC3-204ENST00000469207 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
HDAC3-204ENST00000469207 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
HDAC3-204ENST00000469207 ADAMTS13Q76LX8 1427 aa18.82■□□□□ 0.6
HDAC3-204ENST00000469207 C14orf37Q86TY3 774 aa18.81■□□□□ 0.6
HDAC3-204ENST00000469207 AMOTL2Q9Y2J4 779 aa18.78■□□□□ 0.6
HDAC3-204ENST00000469207 IQGAP3Q86VI3 1631 aa18.77■□□□□ 0.6
HDAC3-204ENST00000469207 PTPRUQ92729 1446 aa18.76■□□□□ 0.59
HDAC3-204ENST00000469207 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
HDAC3-204ENST00000469207 PHLPP1O60346 1717 aa18.74■□□□□ 0.59
HDAC3-204ENST00000469207 ATF3P18847 181 aa18.73■□□□□ 0.59
HDAC3-204ENST00000469207 ZNF326Q5BKZ1 582 aaKnown RBP18.73■□□□□ 0.59
HDAC3-204ENST00000469207 JCADQ9P266 1359 aa18.72■□□□□ 0.59
HDAC3-204ENST00000469207 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
HDAC3-204ENST00000469207 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.71■□□□□ 0.59
HDAC3-204ENST00000469207 NCOA3Q9Y6Q9 1424 aa18.7■□□□□ 0.58
HDAC3-204ENST00000469207 PIK3R4Q99570 1358 aa18.69■□□□□ 0.58
HDAC3-204ENST00000469207 COL16A1Q07092 1604 aaPredicted RBP18.68■□□□□ 0.58
HDAC3-204ENST00000469207 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
HDAC3-204ENST00000469207 METP08581 1390 aa18.68■□□□□ 0.58
HDAC3-204ENST00000469207 TRPM2O94759 1503 aa18.66■□□□□ 0.58
HDAC3-204ENST00000469207 DIP2AQ14689 1571 aa18.66■□□□□ 0.58
HDAC3-204ENST00000469207 LRP6O75581 1613 aa18.66■□□□□ 0.58
HDAC3-204ENST00000469207 NRXN3Q9Y4C0 1643 aa18.65■□□□□ 0.58
HDAC3-204ENST00000469207 DDX17Q92841 729 aaKnown RBP18.65■□□□□ 0.58
HDAC3-204ENST00000469207 NUTM2BA6NNL0 878 aaPredicted RBP18.64■□□□□ 0.57
HDAC3-204ENST00000469207 NUTM2EB1AL46 878 aaPredicted RBP18.64■□□□□ 0.57
HDAC3-204ENST00000469207 MEX3CQ5U5Q3 659 aaKnown RBP18.64■□□□□ 0.57
HDAC3-204ENST00000469207 NUTM2AQ8IVF1 878 aaPredicted RBP18.64■□□□□ 0.57
HDAC3-204ENST00000469207 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
HDAC3-204ENST00000469207 SPATA31A6Q5VVP1 1343 aa18.61■□□□□ 0.57
HDAC3-204ENST00000469207 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
HDAC3-204ENST00000469207 NAIPQ13075 1403 aa18.6■□□□□ 0.57
HDAC3-204ENST00000469207 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
HDAC3-204ENST00000469207 CLTCL1P53675 1640 aa18.6■□□□□ 0.57
HDAC3-204ENST00000469207 AHDC1Q5TGY3 1603 aaPredicted RBP18.6■□□□□ 0.57
HDAC3-204ENST00000469207 SETBP1Q9Y6X0 1596 aa18.59■□□□□ 0.57
HDAC3-204ENST00000469207 MST1RQ04912 1400 aa18.58■□□□□ 0.57
HDAC3-204ENST00000469207 RRBP1Q9P2E9 1410 aaKnown RBP18.58■□□□□ 0.57
HDAC3-204ENST00000469207 XRN1Q8IZH2 1706 aaKnown RBP18.58■□□□□ 0.57
HDAC3-204ENST00000469207 NEXMIFQ5QGS0 1516 aa18.57■□□□□ 0.56
HDAC3-204ENST00000469207 FOXD1Q16676 465 aa18.56■□□□□ 0.56
HDAC3-204ENST00000469207 ZNF772Q68DY9 489 aaPredicted RBP18.56■□□□□ 0.56
HDAC3-204ENST00000469207 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
HDAC3-204ENST00000469207 DCCP43146 1447 aa18.54■□□□□ 0.56
HDAC3-204ENST00000469207 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
HDAC3-204ENST00000469207 SHPRHQ149N8 1683 aa18.53■□□□□ 0.56
HDAC3-204ENST00000469207 LRRC59Q96AG4 307 aaKnown RBP18.52■□□□□ 0.56
HDAC3-204ENST00000469207 ORAI2Q96SN7 254 aa18.52■□□□□ 0.56
HDAC3-204ENST00000469207 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
HDAC3-204ENST00000469207 ADGRL3Q9HAR2 1447 aa18.51■□□□□ 0.55
HDAC3-204ENST00000469207 VGFO15240 615 aaPredicted RBP18.51■□□□□ 0.55
HDAC3-204ENST00000469207 RXRBP28702 533 aa18.51■□□□□ 0.55
HDAC3-204ENST00000469207 ROBO2Q9HCK4 1378 aa18.51■□□□□ 0.55
HDAC3-204ENST00000469207 AFF2P51816 1311 aa18.5■□□□□ 0.55
HDAC3-204ENST00000469207 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.557e-7■■■■□ 25
HDAC3-204ENST00000469207 KIF1BO60333 1816 aa18.5■□□□□ 0.55
HDAC3-204ENST00000469207 C8orf37Q96NL8 207 aa18.49■□□□□ 0.55
HDAC3-204ENST00000469207 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
HDAC3-204ENST00000469207 C1orf167Q5SNV9 1468 aa18.47■□□□□ 0.55
HDAC3-204ENST00000469207 NHSL1Q5SYE7 1610 aa18.47■□□□□ 0.55
HDAC3-204ENST00000469207 HFM1A2PYH4 1435 aa18.47■□□□□ 0.55
HDAC3-204ENST00000469207 PNPLA6Q8IY17 1366 aa18.46■□□□□ 0.55
HDAC3-204ENST00000469207 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
HDAC3-204ENST00000469207 RGL3Q3MIN7 710 aa18.46■□□□□ 0.55
HDAC3-204ENST00000469207 QTRT2Q9H974 415 aaKnown RBP18.46■□□□□ 0.55
HDAC3-204ENST00000469207 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
HDAC3-204ENST00000469207 ADGRF5Q8IZF2 1346 aa18.44■□□□□ 0.54
HDAC3-204ENST00000469207 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
HDAC3-204ENST00000469207 STK26Q9P289 416 aa18.42■□□□□ 0.54
HDAC3-204ENST00000469207 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
HDAC3-204ENST00000469207 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
HDAC3-204ENST00000469207 SOS2Q07890 1332 aaPredicted RBP18.41■□□□□ 0.54
HDAC3-204ENST00000469207 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
HDAC3-204ENST00000469207 TMEM132EQ6IEE7 984 aa18.4■□□□□ 0.54
HDAC3-204ENST00000469207 XPCQ01831 940 aaPredicted RBP18.39■□□□□ 0.53
HDAC3-204ENST00000469207 ESCO1Q5FWF5 840 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms