RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-208ENST00000469102 NLRP7Q8WX94 980 aa11.38□□□□□ -0.59
CMC1-208ENST00000469102 MINK1Q8N4C8 1332 aaPredicted RBP11.37□□□□□ -0.59
CMC1-208ENST00000469102 PPP4CP60510 307 aa11.37□□□□□ -0.59
CMC1-208ENST00000469102 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
CMC1-208ENST00000469102 RNF40O75150 1001 aa11.35□□□□□ -0.59
CMC1-208ENST00000469102 NYAP1Q6ZVC0 841 aa11.35□□□□□ -0.59
CMC1-208ENST00000469102 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
CMC1-208ENST00000469102 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
CMC1-208ENST00000469102 SLC10A3P09131 477 aa11.31□□□□□ -0.6
CMC1-208ENST00000469102 APLP1P51693 650 aa11.31□□□□□ -0.6
CMC1-208ENST00000469102 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
CMC1-208ENST00000469102 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
CMC1-208ENST00000469102 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
CMC1-208ENST00000469102 SLC4A3P48751 1232 aa11.27□□□□□ -0.61
CMC1-208ENST00000469102 ITGBL1O95965 494 aaPredicted RBP11.26□□□□□ -0.61
CMC1-208ENST00000469102 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
CMC1-208ENST00000469102 MDM2Q00987 491 aaPredicted RBP11.24□□□□□ -0.61
CMC1-208ENST00000469102 TJAP1Q5JTD0 557 aa11.24□□□□□ -0.61
CMC1-208ENST00000469102 CFHP08603 1231 aa11.23□□□□□ -0.61
CMC1-208ENST00000469102 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
CMC1-208ENST00000469102 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
CMC1-208ENST00000469102 DDX11L8A8MPP1 907 aa11.22□□□□□ -0.61
CMC1-208ENST00000469102 MTRQ99707 1265 aa11.21□□□□□ -0.61
CMC1-208ENST00000469102 REPIN1Q9BWE0 567 aaKnown RBP11.21□□□□□ -0.61
CMC1-208ENST00000469102 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
CMC1-208ENST00000469102 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
CMC1-208ENST00000469102 RDH13Q8NBN7 331 aa11.19□□□□□ -0.62
CMC1-208ENST00000469102 TRIM66O15016 1216 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 KCNC4Q03721 635 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 AMHR2Q16671 573 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 ZNF516Q92618 1163 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 AK7Q96M32 723 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 PRR14Q9BWN1 585 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
CMC1-208ENST00000469102 CLCN1P35523 988 aa11.17□□□□□ -0.62
CMC1-208ENST00000469102 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
CMC1-208ENST00000469102 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
CMC1-208ENST00000469102 CD46P15529 392 aa11.16□□□□□ -0.62
CMC1-208ENST00000469102 GCGRP47871 477 aa11.16□□□□□ -0.62
CMC1-208ENST00000469102 COPS2P61201 443 aa11.16□□□□□ -0.62
CMC1-208ENST00000469102 BLOC1S3Q6QNY0 202 aa11.16□□□□□ -0.62
CMC1-208ENST00000469102 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
CMC1-208ENST00000469102 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
CMC1-208ENST00000469102 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
CMC1-208ENST00000469102 A0A0G2JS52 829 aa11.11□□□□□ -0.63
CMC1-208ENST00000469102 FUT2Q10981 343 aa11.11□□□□□ -0.63
CMC1-208ENST00000469102 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
CMC1-208ENST00000469102 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
CMC1-208ENST00000469102 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
CMC1-208ENST00000469102 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
CMC1-208ENST00000469102 ZPR1O75312 459 aa11.1□□□□□ -0.63
CMC1-208ENST00000469102 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
CMC1-208ENST00000469102 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
CMC1-208ENST00000469102 PDE4DQ08499 809 aa11.08□□□□□ -0.64
CMC1-208ENST00000469102 MORN1Q5T089 497 aa11.08□□□□□ -0.64
CMC1-208ENST00000469102 ATP6V1AP38606 617 aa11.07□□□□□ -0.64
CMC1-208ENST00000469102 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
CMC1-208ENST00000469102 TLL1O43897 1013 aa11.05□□□□□ -0.64
CMC1-208ENST00000469102 KDM4AO75164 1064 aa11.05□□□□□ -0.64
CMC1-208ENST00000469102 NR1I2O75469 434 aa11.04□□□□□ -0.64
CMC1-208ENST00000469102 MS4A1P11836 297 aa11.04□□□□□ -0.64
CMC1-208ENST00000469102 SLC27A5Q9Y2P5 690 aa11.03□□□□□ -0.64
CMC1-208ENST00000469102 HLA-CQ95604 372 aa11.02□□□□□ -0.65
CMC1-208ENST00000469102 PPP1R18Q6NYC8 613 aa11.01□□□□□ -0.65
CMC1-208ENST00000469102 THAP11Q96EK4 314 aa11.01□□□□□ -0.65
CMC1-208ENST00000469102 HOXA2O43364 376 aa10.99□□□□□ -0.65
CMC1-208ENST00000469102 USP46P62068 366 aa10.99□□□□□ -0.65
CMC1-208ENST00000469102 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
CMC1-208ENST00000469102 ADH1BP00325 375 aa10.98□□□□□ -0.65
CMC1-208ENST00000469102 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
CMC1-208ENST00000469102 SPIRE2Q8WWL2 714 aa10.98□□□□□ -0.65
CMC1-208ENST00000469102 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
CMC1-208ENST00000469102 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
CMC1-208ENST00000469102 NUTM1Q86Y26 1132 aa10.97□□□□□ -0.65
CMC1-208ENST00000469102 SPSB2Q99619 263 aa10.97□□□□□ -0.65
CMC1-208ENST00000469102 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.97□□□□□ -0.65
CMC1-208ENST00000469102 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
CMC1-208ENST00000469102 GUCA2AQ02747 115 aa10.96□□□□□ -0.65
CMC1-208ENST00000469102 RNF19BQ6ZMZ0 732 aa10.96□□□□□ -0.65
CMC1-208ENST00000469102 FAM160A2Q8N612 972 aaPredicted RBP10.95□□□□□ -0.66
CMC1-208ENST00000469102 RGS20O76081 388 aa10.94□□□□□ -0.66
CMC1-208ENST00000469102 FMNL1O95466 1100 aaPredicted RBP10.94□□□□□ -0.66
CMC1-208ENST00000469102 S1PR4O95977 384 aa10.94□□□□□ -0.66
CMC1-208ENST00000469102 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
CMC1-208ENST00000469102 MOXD2PA6NHM9 499 aa10.93□□□□□ -0.66
CMC1-208ENST00000469102 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
CMC1-208ENST00000469102 TBC1D2Q9BYX2 928 aa10.93□□□□□ -0.66
CMC1-208ENST00000469102 PCDHGC3Q9UN70 934 aa10.93□□□□□ -0.66
CMC1-208ENST00000469102 NDUFV2P19404 249 aa10.92□□□□□ -0.66
CMC1-208ENST00000469102 SLC6A16Q9GZN6 736 aa10.92□□□□□ -0.66
CMC1-208ENST00000469102 Q3C1V9 767 aa10.91□□□□□ -0.66
CMC1-208ENST00000469102 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
CMC1-208ENST00000469102 GGCXP38435 758 aa10.9□□□□□ -0.66
CMC1-208ENST00000469102 KDM4CQ9H3R0 1056 aa10.9□□□□□ -0.66
CMC1-208ENST00000469102 FDX1P10109 184 aa10.89□□□□□ -0.67
CMC1-208ENST00000469102 SYMPKQ92797 1274 aaKnown RBP10.89□□□□□ -0.67
CMC1-208ENST00000469102 EMID1Q96A84 441 aaPredicted RBP10.88□□□□□ -0.67
CMC1-208ENST00000469102 PRDM9Q9NQV7 894 aa10.88□□□□□ -0.67
CMC1-208ENST00000469102 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms