RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
SCAP-210ENST00000468965 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
SCAP-210ENST00000468965 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
SCAP-210ENST00000468965 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
SCAP-210ENST00000468965 LTKP29376 864 aa19.03■□□□□ 0.64
SCAP-210ENST00000468965 SCAF11Q99590 1463 aaKnown RBP19.03■□□□□ 0.64
SCAP-210ENST00000468965 RPGRIP1LQ68CZ1 1315 aa19.01■□□□□ 0.63
SCAP-210ENST00000468965 NUTM2DQ5VT03 806 aaPredicted RBP19■□□□□ 0.63
SCAP-210ENST00000468965 NCKAP5LQ9HCH0 1330 aa19■□□□□ 0.63
SCAP-210ENST00000468965 TXNDC2Q86VQ3 553 aa18.99■□□□□ 0.63
SCAP-210ENST00000468965 ANKLE2Q86XL3 938 aa18.99■□□□□ 0.63
SCAP-210ENST00000468965 IQGAP1P46940 1657 aa18.98■□□□□ 0.63
SCAP-210ENST00000468965 MYOM2P54296 1465 aa18.98■□□□□ 0.63
SCAP-210ENST00000468965 NRXN3Q9Y4C0 1643 aa18.98■□□□□ 0.63
SCAP-210ENST00000468965 MED14O60244 1454 aa18.97■□□□□ 0.63
SCAP-210ENST00000468965 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.97■□□□□ 0.63
SCAP-210ENST00000468965 L3MBTL2Q969R5 705 aa18.97■□□□□ 0.63
SCAP-210ENST00000468965 EID1Q9Y6B2 187 aa18.97■□□□□ 0.63
SCAP-210ENST00000468965 NRXN1Q9ULB1 1477 aa18.96■□□□□ 0.63
SCAP-210ENST00000468965 PLEKHG1Q9ULL1 1385 aa18.95■□□□□ 0.62
SCAP-210ENST00000468965 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
SCAP-210ENST00000468965 ADGRF5Q8IZF2 1346 aa18.95■□□□□ 0.62
SCAP-210ENST00000468965 TONSLQ96HA7 1378 aa18.94■□□□□ 0.62
SCAP-210ENST00000468965 SETBP1Q9Y6X0 1596 aa18.94■□□□□ 0.62
SCAP-210ENST00000468965 NPHP4O75161 1426 aaPredicted RBP18.94■□□□□ 0.62
SCAP-210ENST00000468965 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
SCAP-210ENST00000468965 HDGFP51858 240 aaKnown RBP18.94■□□□□ 0.62
SCAP-210ENST00000468965 SETD1AO15047 1707 aaKnown RBP18.94■□□□□ 0.62
SCAP-210ENST00000468965 VGFO15240 615 aaPredicted RBP18.93■□□□□ 0.62
SCAP-210ENST00000468965 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
SCAP-210ENST00000468965 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
SCAP-210ENST00000468965 PIK3C2GO75747 1445 aa18.91■□□□□ 0.62
SCAP-210ENST00000468965 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
SCAP-210ENST00000468965 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
SCAP-210ENST00000468965 ALKQ9UM73 1620 aa18.89■□□□□ 0.61
SCAP-210ENST00000468965 PRAG1Q86YV5 1406 aa18.88■□□□□ 0.61
SCAP-210ENST00000468965 DIP2AQ14689 1571 aa18.88■□□□□ 0.61
SCAP-210ENST00000468965 LAMC1P11047 1609 aa18.87■□□□□ 0.61
SCAP-210ENST00000468965 KIAA1210Q9ULL0 1709 aa18.87■□□□□ 0.61
SCAP-210ENST00000468965 TIMELESSQ9UNS1 1208 aa18.86■□□□□ 0.61
SCAP-210ENST00000468965 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
SCAP-210ENST00000468965 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
SCAP-210ENST00000468965 BCANQ96GW7 911 aa18.85■□□□□ 0.61
SCAP-210ENST00000468965 SLC26A8Q96RN1 970 aa18.85■□□□□ 0.61
SCAP-210ENST00000468965 CHD2O14647 1828 aaKnown RBP18.84■□□□□ 0.61
SCAP-210ENST00000468965 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
SCAP-210ENST00000468965 STRCP1A6NGW2 1772 aa18.83■□□□□ 0.61
SCAP-210ENST00000468965 CFAP70Q5T0N1 1121 aa18.82■□□□□ 0.6
SCAP-210ENST00000468965 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
SCAP-210ENST00000468965 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
SCAP-210ENST00000468965 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
SCAP-210ENST00000468965 METP08581 1390 aa18.81■□□□□ 0.6
SCAP-210ENST00000468965 ADGRB1O14514 1584 aa18.8■□□□□ 0.6
SCAP-210ENST00000468965 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
SCAP-210ENST00000468965 XRN1Q8IZH2 1706 aaKnown RBP18.79■□□□□ 0.6
SCAP-210ENST00000468965 NWD1Q149M9 1564 aa18.78■□□□□ 0.6
SCAP-210ENST00000468965 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.59
SCAP-210ENST00000468965 KNDC1Q76NI1 1749 aa18.76■□□□□ 0.59
SCAP-210ENST00000468965 PIK3R4Q99570 1358 aa18.76■□□□□ 0.59
SCAP-210ENST00000468965 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
SCAP-210ENST00000468965 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
SCAP-210ENST00000468965 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
SCAP-210ENST00000468965 YTHDC2Q9H6S0 1430 aaKnown RBP18.73■□□□□ 0.59
SCAP-210ENST00000468965 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
SCAP-210ENST00000468965 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
SCAP-210ENST00000468965 LRPPRCP42704 1394 aaKnown RBP18.71■□□□□ 0.59
SCAP-210ENST00000468965 GPRASP1Q5JY77 1395 aa18.71■□□□□ 0.59
SCAP-210ENST00000468965 KCNA6P17658 529 aa18.71■□□□□ 0.59
SCAP-210ENST00000468965 XIRP1Q702N8 1843 aaKnown RBP18.71■□□□□ 0.59
SCAP-210ENST00000468965 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
SCAP-210ENST00000468965 CPS1P31327 1500 aa18.7■□□□□ 0.58
SCAP-210ENST00000468965 TECPR2O15040 1411 aa18.7■□□□□ 0.58
SCAP-210ENST00000468965 AMOTL2Q9Y2J4 779 aa18.7■□□□□ 0.58
SCAP-210ENST00000468965 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
SCAP-210ENST00000468965 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
SCAP-210ENST00000468965 DLC1Q96QB1 1528 aa18.68■□□□□ 0.58
SCAP-210ENST00000468965 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
SCAP-210ENST00000468965 STK26Q9P289 416 aa18.67■□□□□ 0.58
SCAP-210ENST00000468965 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
SCAP-210ENST00000468965 ROBO2Q9HCK4 1378 aa18.66■□□□□ 0.58
SCAP-210ENST00000468965 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.58
SCAP-210ENST00000468965 TRAK1Q9UPV9 953 aa18.64■□□□□ 0.57
SCAP-210ENST00000468965 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
SCAP-210ENST00000468965 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
SCAP-210ENST00000468965 FAM135BQ49AJ0 1406 aa18.62■□□□□ 0.57
SCAP-210ENST00000468965 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
SCAP-210ENST00000468965 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.62■□□□□ 0.57
SCAP-210ENST00000468965 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
SCAP-210ENST00000468965 WAPLQ7Z5K2 1190 aa18.6■□□□□ 0.57
SCAP-210ENST00000468965 PROSER2Q86WR7 435 aaPredicted RBP18.6■□□□□ 0.57
SCAP-210ENST00000468965 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
SCAP-210ENST00000468965 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
SCAP-210ENST00000468965 SIRT1Q96EB6 747 aa18.59■□□□□ 0.57
SCAP-210ENST00000468965 PRAM1Q96QH2 718 aa18.58■□□□□ 0.56
SCAP-210ENST00000468965 USP47Q96K76 1375 aa18.55■□□□□ 0.56
SCAP-210ENST00000468965 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
SCAP-210ENST00000468965 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
SCAP-210ENST00000468965 POGKQ9P215 609 aa18.54■□□□□ 0.56
SCAP-210ENST00000468965 ADGRL3Q9HAR2 1447 aa18.54■□□□□ 0.56
SCAP-210ENST00000468965 ADGRB2O60241 1585 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms