RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 NEXMIFQ5QGS0 1516 aa16.37■□□□□ 0.21
MSH5-214ENST00000468602 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
MSH5-214ENST00000468602 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
MSH5-214ENST00000468602 PPLO60437 1756 aa16.36■□□□□ 0.21
MSH5-214ENST00000468602 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
MSH5-214ENST00000468602 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.34■□□□□ 0.21
MSH5-214ENST00000468602 MED14O60244 1454 aa16.34■□□□□ 0.21
MSH5-214ENST00000468602 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
MSH5-214ENST00000468602 CERKQ8TCT0 537 aa16.31■□□□□ 0.2
MSH5-214ENST00000468602 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
MSH5-214ENST00000468602 L3MBTL2Q969R5 705 aa16.3■□□□□ 0.2
MSH5-214ENST00000468602 STAG3Q9UJ98 1225 aa16.3■□□□□ 0.2
MSH5-214ENST00000468602 SCAF11Q99590 1463 aaKnown RBP16.29■□□□□ 0.2
MSH5-214ENST00000468602 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
MSH5-214ENST00000468602 PLEKHG1Q9ULL1 1385 aa16.29■□□□□ 0.2
MSH5-214ENST00000468602 SETBP1Q9Y6X0 1596 aa16.28■□□□□ 0.2
MSH5-214ENST00000468602 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
MSH5-214ENST00000468602 ANKLE2Q86XL3 938 aa16.27■□□□□ 0.2
MSH5-214ENST00000468602 POLR1AO95602 1720 aaPredicted RBP16.26■□□□□ 0.19
MSH5-214ENST00000468602 KIAA1210Q9ULL0 1709 aa16.26■□□□□ 0.19
MSH5-214ENST00000468602 LTKP29376 864 aa16.26■□□□□ 0.19
MSH5-214ENST00000468602 NEUROD1Q13562 356 aa16.26■□□□□ 0.19
MSH5-214ENST00000468602 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
MSH5-214ENST00000468602 EID1Q9Y6B2 187 aa16.26■□□□□ 0.19
MSH5-214ENST00000468602 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
MSH5-214ENST00000468602 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
MSH5-214ENST00000468602 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
MSH5-214ENST00000468602 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
MSH5-214ENST00000468602 DIP2AQ14689 1571 aa16.25■□□□□ 0.19
MSH5-214ENST00000468602 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
MSH5-214ENST00000468602 STRCQ7RTU9 1775 aa16.24■□□□□ 0.19
MSH5-214ENST00000468602 RGL3Q3MIN7 710 aa16.24■□□□□ 0.19
MSH5-214ENST00000468602 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
MSH5-214ENST00000468602 LAMC1P11047 1609 aa16.23■□□□□ 0.19
MSH5-214ENST00000468602 TXNDC2Q86VQ3 553 aa16.23■□□□□ 0.19
MSH5-214ENST00000468602 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
MSH5-214ENST00000468602 ADGRF5Q8IZF2 1346 aa16.21■□□□□ 0.19
MSH5-214ENST00000468602 ADAMTS13Q76LX8 1427 aa16.21■□□□□ 0.19
MSH5-214ENST00000468602 C14orf93Q9H972 538 aaKnown RBP16.21■□□□□ 0.19
MSH5-214ENST00000468602 TBX22Q9Y458 520 aa16.21■□□□□ 0.19
MSH5-214ENST00000468602 SETD1AO15047 1707 aaKnown RBP16.21■□□□□ 0.19
MSH5-214ENST00000468602 GPRASP1Q5JY77 1395 aa16.21■□□□□ 0.19
MSH5-214ENST00000468602 PIK3R4Q99570 1358 aa16.21■□□□□ 0.19
MSH5-214ENST00000468602 NPHP4O75161 1426 aaPredicted RBP16.2■□□□□ 0.18
MSH5-214ENST00000468602 IQGAP1P46940 1657 aa16.19■□□□□ 0.18
MSH5-214ENST00000468602 ALKQ9UM73 1620 aa16.19■□□□□ 0.18
MSH5-214ENST00000468602 DMRT2Q9Y5R5 561 aa16.18■□□□□ 0.18
MSH5-214ENST00000468602 TRPM1Q7Z4N2 1603 aa16.18■□□□□ 0.18
MSH5-214ENST00000468602 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
MSH5-214ENST00000468602 RALGAPBQ86X10 1494 aa16.17■□□□□ 0.18
MSH5-214ENST00000468602 HSPA2P54652 639 aa16.17■□□□□ 0.18
MSH5-214ENST00000468602 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
MSH5-214ENST00000468602 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
MSH5-214ENST00000468602 TECPR2O15040 1411 aa16.13■□□□□ 0.17
MSH5-214ENST00000468602 SIRT1Q96EB6 747 aa16.13■□□□□ 0.17
MSH5-214ENST00000468602 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
MSH5-214ENST00000468602 ASXL1Q8IXJ9 1541 aa16.13■□□□□ 0.17
MSH5-214ENST00000468602 NWD1Q149M9 1564 aa16.12■□□□□ 0.17
MSH5-214ENST00000468602 ABCC11Q96J66 1382 aa16.11■□□□□ 0.17
MSH5-214ENST00000468602 CHD2O14647 1828 aaKnown RBP16.1■□□□□ 0.17
MSH5-214ENST00000468602 DLC1Q96QB1 1528 aa16.1■□□□□ 0.17
MSH5-214ENST00000468602 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
MSH5-214ENST00000468602 NUTM2DQ5VT03 806 aaPredicted RBP16.1■□□□□ 0.17
MSH5-214ENST00000468602 KNDC1Q76NI1 1749 aa16.1■□□□□ 0.17
MSH5-214ENST00000468602 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
MSH5-214ENST00000468602 XRN1Q8IZH2 1706 aaKnown RBP16.09■□□□□ 0.17
MSH5-214ENST00000468602 METP08581 1390 aa16.09■□□□□ 0.17
MSH5-214ENST00000468602 PTCH1Q13635 1447 aa16.08■□□□□ 0.16
MSH5-214ENST00000468602 FAM135BQ49AJ0 1406 aa16.07■□□□□ 0.16
MSH5-214ENST00000468602 YTHDC2Q9H6S0 1430 aaKnown RBP16.07■□□□□ 0.16
MSH5-214ENST00000468602 CPS1P31327 1500 aa16.06■□□□□ 0.16
MSH5-214ENST00000468602 NKTRP30414 1462 aaKnown RBP16.06■□□□□ 0.16
MSH5-214ENST00000468602 PTPRUQ92729 1446 aa16.06■□□□□ 0.16
MSH5-214ENST00000468602 KCNA6P17658 529 aa16.06■□□□□ 0.16
MSH5-214ENST00000468602 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
MSH5-214ENST00000468602 ROCK2O75116 1388 aaKnown RBP16.05■□□□□ 0.16
MSH5-214ENST00000468602 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
MSH5-214ENST00000468602 SLC26A8Q96RN1 970 aa16.05■□□□□ 0.16
MSH5-214ENST00000468602 SBNO2Q9Y2G9 1366 aa16.02■□□□□ 0.16
MSH5-214ENST00000468602 ARHGEF28Q8N1W1 1705 aaKnown RBP16■□□□□ 0.15
MSH5-214ENST00000468602 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
MSH5-214ENST00000468602 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
MSH5-214ENST00000468602 STRCP1A6NGW2 1772 aa16■□□□□ 0.15
MSH5-214ENST00000468602 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
MSH5-214ENST00000468602 TMEM132EQ6IEE7 984 aa15.99■□□□□ 0.15
MSH5-214ENST00000468602 BCANQ96GW7 911 aa15.99■□□□□ 0.15
MSH5-214ENST00000468602 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
MSH5-214ENST00000468602 LTBP4Q8N2S1 1624 aa15.98■□□□□ 0.15
MSH5-214ENST00000468602 ROBO2Q9HCK4 1378 aa15.97■□□□□ 0.15
MSH5-214ENST00000468602 USP47Q96K76 1375 aa15.96■□□□□ 0.15
MSH5-214ENST00000468602 ADGRB2O60241 1585 aa15.95■□□□□ 0.14
MSH5-214ENST00000468602 IQSEC2Q5JU85 1478 aa15.94■□□□□ 0.14
MSH5-214ENST00000468602 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
MSH5-214ENST00000468602 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
MSH5-214ENST00000468602 PUS7Q96PZ0 661 aaKnown RBP15.93■□□□□ 0.14
MSH5-214ENST00000468602 DCCP43146 1447 aa15.93■□□□□ 0.14
MSH5-214ENST00000468602 ZNF335Q9H4Z2 1342 aaPredicted RBP15.93■□□□□ 0.14
MSH5-214ENST00000468602 CENPJQ9HC77 1338 aaPredicted RBP15.93■□□□□ 0.14
MSH5-214ENST00000468602 TESK2Q96S53 571 aa15.92■□□□□ 0.14
MSH5-214ENST00000468602 TRAK1Q9UPV9 953 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms