RNA–Protein interactions for RNA: ENST00000468589.5

DENND1B-207, Transcript of DENN domain containing 1B, humanhuman

TSL 1 (best)

Gene DENND1B, Length 2,141 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-207ENST00000468589 ZC3H13Q5T200 1668 aaKnown RBP34.16■■■■□ 3.06
DENND1B-207ENST00000468589 SCAF11Q99590 1463 aaKnown RBP34.14■■■■□ 3.06
DENND1B-207ENST00000468589 MRS2Q9HD23 443 aa34.13■■■■□ 3.05
DENND1B-207ENST00000468589 TMF1P82094 1093 aa34.13■■■■□ 3.05
DENND1B-207ENST00000468589 IDI1Q13907 227 aa34.12■■■■□ 3.05
DENND1B-207ENST00000468589 NUTM2DQ5VT03 806 aaPredicted RBP34.11■■■■□ 3.05
DENND1B-207ENST00000468589 KIAA1210Q9ULL0 1709 aa34.11■■■■□ 3.05
DENND1B-207ENST00000468589 FBXO31Q5XUX0 539 aaPredicted RBP34.1■■■■□ 3.05
DENND1B-207ENST00000468589 NRXN1Q9ULB1 1477 aa34.1■■■■□ 3.05
DENND1B-207ENST00000468589 MLECQ14165 292 aa34.1■■■■□ 3.05
DENND1B-207ENST00000468589 PIK3C2BO00750 1634 aa34.09■■■■□ 3.05
DENND1B-207ENST00000468589 PPLO60437 1756 aa34.08■■■■□ 3.05
DENND1B-207ENST00000468589 FAM9BQ8IZU0 186 aa34.06■■■■□ 3.04
DENND1B-207ENST00000468589 REREQ9P2R6 1566 aa34.05■■■■□ 3.04
DENND1B-207ENST00000468589 AGLP35573 1532 aa34.04■■■■□ 3.04
DENND1B-207ENST00000468589 HNRNPUQ00839 825 aaKnown RBP eCLIP34.03■■■■□ 3.04
DENND1B-207ENST00000468589 PREX1Q8TCU6 1659 aa34.03■■■■□ 3.04
DENND1B-207ENST00000468589 RPGRIP1LQ68CZ1 1315 aa34.02■■■■□ 3.04
DENND1B-207ENST00000468589 PIK3C2GO75747 1445 aa33.99■■■■□ 3.03
DENND1B-207ENST00000468589 PER1O15534 1290 aaPredicted RBP33.99■■■■□ 3.03
DENND1B-207ENST00000468589 PANK3Q9H999 370 aa33.99■■■■□ 3.03
DENND1B-207ENST00000468589 SLC52A1Q9NWF4 448 aa33.99■■■■□ 3.03
DENND1B-207ENST00000468589 SENP3Q9H4L4 574 aaPredicted RBP33.98■■■■□ 3.03
DENND1B-207ENST00000468589 C14orf93Q9H972 538 aaKnown RBP33.98■■■■□ 3.03
DENND1B-207ENST00000468589 ARHGEF40Q8TER5 1519 aa33.98■■■■□ 3.03
DENND1B-207ENST00000468589 EIF3AQ14152 1382 aaKnown RBP33.97■■■■□ 3.03
DENND1B-207ENST00000468589 TMEM132EQ6IEE7 984 aa33.97■■■■□ 3.03
DENND1B-207ENST00000468589 CLTCQ00610 1675 aaKnown RBP33.96■■■■□ 3.03
DENND1B-207ENST00000468589 NEXMIFQ5QGS0 1516 aa33.95■■■■□ 3.02
DENND1B-207ENST00000468589 MYO5BQ9ULV0 1848 aa33.94■■■■□ 3.02
DENND1B-207ENST00000468589 PPP6R1Q9UPN7 881 aa33.92■■■■□ 3.02
DENND1B-207ENST00000468589 ERVK-7P63135 1459 aa33.91■■■■□ 3.02
DENND1B-207ENST00000468589 TRAK1Q9UPV9 953 aa33.91■■■■□ 3.02
DENND1B-207ENST00000468589 VGFO15240 615 aaPredicted RBP33.91■■■■□ 3.02
DENND1B-207ENST00000468589 TMEM131LA2VDJ0 1609 aa33.88■■■■□ 3.01
DENND1B-207ENST00000468589 SETBP1Q9Y6X0 1596 aa33.87■■■■□ 3.01
DENND1B-207ENST00000468589 ADGRB1O14514 1584 aa33.86■■■■□ 3.01
DENND1B-207ENST00000468589 RALBP1Q15311 655 aa33.86■■■■□ 3.01
DENND1B-207ENST00000468589 CC2D1BQ5T0F9 858 aaKnown RBP33.86■■■■□ 3.01
DENND1B-207ENST00000468589 CDCA8Q53HL2 280 aa33.84■■■■□ 3.01
DENND1B-207ENST00000468589 KTN1Q86UP2 1357 aaKnown RBP33.84■■■■□ 3.01
DENND1B-207ENST00000468589 MYBBP1AQ9BQG0 1328 aaKnown RBP33.83■■■■□ 3.01
DENND1B-207ENST00000468589 TMC1Q8TDI8 760 aa33.82■■■■□ 3
DENND1B-207ENST00000468589 PARD3Q8TEW0 1356 aa33.8■■■■□ 3
DENND1B-207ENST00000468589 CENPJQ9HC77 1338 aaPredicted RBP33.8■■■■□ 3
DENND1B-207ENST00000468589 STAG3Q9UJ98 1225 aa33.8■■■■□ 3
DENND1B-207ENST00000468589 PNISRQ8TF01 805 aaKnown RBP33.77■■■■□ 3
DENND1B-207ENST00000468589 MYO3AQ8NEV4 1616 aa33.76■■■■□ 3
DENND1B-207ENST00000468589 ESF1Q9H501 851 aaKnown RBP33.76■■■■□ 3
DENND1B-207ENST00000468589 TRHP20396 242 aaPredicted RBP33.76■■■□□ 2.99
DENND1B-207ENST00000468589 ZMYM3Q14202 1370 aa33.75■■■□□ 2.99
DENND1B-207ENST00000468589 MYOM1P52179 1685 aa33.75■■■□□ 2.99
DENND1B-207ENST00000468589 ZFYVE9O95405 1425 aa33.75■■■□□ 2.99
DENND1B-207ENST00000468589 KDM5AP29375 1690 aaKnown RBP33.74■■■□□ 2.99
DENND1B-207ENST00000468589 SPATA31D1Q6ZQQ2 1576 aa33.74■■■□□ 2.99
DENND1B-207ENST00000468589 BRD4O60885 1362 aaPredicted RBP33.72■■■□□ 2.99
DENND1B-207ENST00000468589 SENP3-EIF4A1A0A087X0R7 540 aa33.71■■■□□ 2.99
DENND1B-207ENST00000468589 KNSTRNQ9Y448 316 aa33.71■■■□□ 2.99
DENND1B-207ENST00000468589 STK26Q9P289 416 aa33.69■■■□□ 2.98
DENND1B-207ENST00000468589 SBNO2Q9Y2G9 1366 aa33.69■■■□□ 2.98
DENND1B-207ENST00000468589 SLC24A1O60721 1099 aa33.68■■■□□ 2.98
DENND1B-207ENST00000468589 SUPT16HQ9Y5B9 1047 aaKnown RBP33.68■■■□□ 2.98
DENND1B-207ENST00000468589 QRICH2Q9H0J4 1663 aa33.68■■■□□ 2.98
DENND1B-207ENST00000468589 NLRP13Q86W25 1043 aa33.68■■■□□ 2.98
DENND1B-207ENST00000468589 A2ML1A8K2U0 1454 aa33.66■■■□□ 2.98
DENND1B-207ENST00000468589 AMER1Q5JTC6 1135 aaPredicted RBP33.65■■■□□ 2.98
DENND1B-207ENST00000468589 ASXL1Q8IXJ9 1541 aa33.65■■■□□ 2.98
DENND1B-207ENST00000468589 ZBED9Q6R2W3 1325 aa33.64■■■□□ 2.98
DENND1B-207ENST00000468589 SAFB2Q14151 953 aaKnown RBP eCLIP33.64■■■□□ 2.98
DENND1B-207ENST00000468589 ARHGEF28Q8N1W1 1705 aaKnown RBP33.62■■■□□ 2.97
DENND1B-207ENST00000468589 CARD14Q9BXL6 1004 aa33.6■■■□□ 2.97
DENND1B-207ENST00000468589 LRPPRCP42704 1394 aaKnown RBP33.58■■■□□ 2.97
DENND1B-207ENST00000468589 RIMS2Q9UQ26 1411 aa33.57■■■□□ 2.97
DENND1B-207ENST00000468589 ALKQ9UM73 1620 aa33.56■■■□□ 2.96
DENND1B-207ENST00000468589 FKBP8Q14318 412 aa33.55■■■□□ 2.96
DENND1B-207ENST00000468589 SLC12A5Q9H2X9 1139 aa33.55■■■□□ 2.96
DENND1B-207ENST00000468589 CEBPAP49715 358 aaPredicted RBP33.53■■■□□ 2.96
DENND1B-207ENST00000468589 TNRQ92752 1358 aa33.52■■■□□ 2.96
DENND1B-207ENST00000468589 PPP2R1AP30153 589 aa33.51■■■□□ 2.95
DENND1B-207ENST00000468589 YTHDC2Q9H6S0 1430 aaKnown RBP33.51■■■□□ 2.95
DENND1B-207ENST00000468589 TULP4Q9NRJ4 1543 aa33.49■■■□□ 2.95
DENND1B-207ENST00000468589 EVC2Q86UK5 1308 aa33.49■■■□□ 2.95
DENND1B-207ENST00000468589 PRAM1Q96QH2 718 aa33.49■■■□□ 2.95
DENND1B-207ENST00000468589 CABP2Q9NPB3 220 aa33.49■■■□□ 2.95
DENND1B-207ENST00000468589 PLPPR3Q6T4P5 718 aa33.48■■■□□ 2.95
DENND1B-207ENST00000468589 PTPRMP28827 1452 aa33.47■■■□□ 2.95
DENND1B-207ENST00000468589 MINK1Q8N4C8 1332 aaPredicted RBP33.45■■■□□ 2.94
DENND1B-207ENST00000468589 BCANQ96GW7 911 aa33.44■■■□□ 2.94
DENND1B-207ENST00000468589 POGKQ9P215 609 aa33.44■■■□□ 2.94
DENND1B-207ENST00000468589 NPC1L1Q9UHC9 1359 aa33.44■■■□□ 2.94
DENND1B-207ENST00000468589 NEFLP07196 543 aa33.41■■■□□ 2.94
DENND1B-207ENST00000468589 NSD3Q9BZ95 1437 aa33.39■■■□□ 2.94
DENND1B-207ENST00000468589 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.38■■■□□ 2.93
DENND1B-207ENST00000468589 SALL2Q9Y467 1007 aaPredicted RBP33.38■■■□□ 2.93
DENND1B-207ENST00000468589 SRPK2P78362 688 aaKnown RBP33.37■■■□□ 2.93
DENND1B-207ENST00000468589 WAPLQ7Z5K2 1190 aa33.37■■■□□ 2.93
DENND1B-207ENST00000468589 SETD1AO15047 1707 aaKnown RBP33.36■■■□□ 2.93
DENND1B-207ENST00000468589 NRXN3Q9Y4C0 1643 aa33.35■■■□□ 2.93
DENND1B-207ENST00000468589 PUS7Q96PZ0 661 aaKnown RBP33.35■■■□□ 2.93
DENND1B-207ENST00000468589 UBR1Q8IWV7 1749 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms