RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 SOCS7O14512 581 aa22.16■■□□□ 1.14
COL16A1-208ENST00000468459 TMEM94Q12767 1356 aa22.15■■□□□ 1.14
COL16A1-208ENST00000468459 PLEKHG1Q9ULL1 1385 aa22.14■■□□□ 1.14
COL16A1-208ENST00000468459 RIMS2Q9UQ26 1411 aa22.14■■□□□ 1.13
COL16A1-208ENST00000468459 TMEM131LA2VDJ0 1609 aa22.13■■□□□ 1.13
COL16A1-208ENST00000468459 IQGAP3Q86VI3 1631 aa22.13■■□□□ 1.13
COL16A1-208ENST00000468459 HDGFP51858 240 aaKnown RBP22.11■■□□□ 1.13
COL16A1-208ENST00000468459 E9PCH4 1651 aa22.11■■□□□ 1.13
COL16A1-208ENST00000468459 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
COL16A1-208ENST00000468459 RBM33Q96EV2 1170 aaKnown RBP22.09■■□□□ 1.13
COL16A1-208ENST00000468459 TBX22Q9Y458 520 aa22.09■■□□□ 1.13
COL16A1-208ENST00000468459 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.08■■□□□ 1.13
COL16A1-208ENST00000468459 NKTRP30414 1462 aaKnown RBP22.08■■□□□ 1.12
COL16A1-208ENST00000468459 NWD1Q149M9 1564 aa22.08■■□□□ 1.12
COL16A1-208ENST00000468459 FAM135BQ49AJ0 1406 aa22.07■■□□□ 1.12
COL16A1-208ENST00000468459 CHGAP10645 457 aaKnown RBP22.07■■□□□ 1.12
COL16A1-208ENST00000468459 BCANQ96GW7 911 aa22.07■■□□□ 1.12
COL16A1-208ENST00000468459 XIRP1Q702N8 1843 aaKnown RBP22.07■■□□□ 1.12
COL16A1-208ENST00000468459 MED1Q15648 1581 aaPredicted RBP22.07■■□□□ 1.12
COL16A1-208ENST00000468459 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
COL16A1-208ENST00000468459 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
COL16A1-208ENST00000468459 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
COL16A1-208ENST00000468459 SETD5Q9C0A6 1442 aa22.05■■□□□ 1.12
COL16A1-208ENST00000468459 NUTM2DQ5VT03 806 aaPredicted RBP22.04■■□□□ 1.12
COL16A1-208ENST00000468459 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
COL16A1-208ENST00000468459 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
COL16A1-208ENST00000468459 MYO5BQ9ULV0 1848 aa22■■□□□ 1.11
COL16A1-208ENST00000468459 PIK3R4Q99570 1358 aa21.99■■□□□ 1.11
COL16A1-208ENST00000468459 TRIM52Q96A61 297 aa21.98■■□□□ 1.11
COL16A1-208ENST00000468459 MSH6P52701 1360 aa21.98■■□□□ 1.11
COL16A1-208ENST00000468459 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
COL16A1-208ENST00000468459 SLAIN2Q9P270 581 aa21.95■■□□□ 1.1
COL16A1-208ENST00000468459 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
COL16A1-208ENST00000468459 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
COL16A1-208ENST00000468459 PTPRUQ92729 1446 aa21.93■■□□□ 1.1
COL16A1-208ENST00000468459 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
COL16A1-208ENST00000468459 RGS17Q9UGC6 210 aaPredicted RBP21.91■■□□□ 1.1
COL16A1-208ENST00000468459 AMOTL2Q9Y2J4 779 aa21.91■■□□□ 1.1
COL16A1-208ENST00000468459 C19orf44Q9H6X5 657 aa21.89■■□□□ 1.09
COL16A1-208ENST00000468459 ROBO1Q9Y6N7 1651 aa21.88■■□□□ 1.09
COL16A1-208ENST00000468459 TRPM2O94759 1503 aa21.88■■□□□ 1.09
COL16A1-208ENST00000468459 SPHKAPQ2M3C7 1700 aa21.88■■□□□ 1.09
COL16A1-208ENST00000468459 SETBP1Q9Y6X0 1596 aa21.87■■□□□ 1.09
COL16A1-208ENST00000468459 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
COL16A1-208ENST00000468459 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
COL16A1-208ENST00000468459 NRXN3Q9Y4C0 1643 aa21.86■■□□□ 1.09
COL16A1-208ENST00000468459 METP08581 1390 aa21.86■■□□□ 1.09
COL16A1-208ENST00000468459 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
COL16A1-208ENST00000468459 CLTCL1P53675 1640 aa21.84■■□□□ 1.09
COL16A1-208ENST00000468459 FOXD1Q16676 465 aa21.83■■□□□ 1.09
COL16A1-208ENST00000468459 C14orf37Q86TY3 774 aa21.83■■□□□ 1.09
COL16A1-208ENST00000468459 NEXMIFQ5QGS0 1516 aa21.83■■□□□ 1.09
COL16A1-208ENST00000468459 MPHOSPH9Q99550 1183 aa21.82■■□□□ 1.08
COL16A1-208ENST00000468459 ATF3P18847 181 aa21.8■■□□□ 1.08
COL16A1-208ENST00000468459 HRCP23327 699 aa21.8■■□□□ 1.08
COL16A1-208ENST00000468459 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
COL16A1-208ENST00000468459 XRN1Q8IZH2 1706 aaKnown RBP21.78■■□□□ 1.08
COL16A1-208ENST00000468459 JCADQ9P266 1359 aa21.78■■□□□ 1.08
COL16A1-208ENST00000468459 DCCP43146 1447 aa21.77■■□□□ 1.08
COL16A1-208ENST00000468459 BRINP3Q76B58 766 aa21.76■■□□□ 1.07
COL16A1-208ENST00000468459 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
COL16A1-208ENST00000468459 RPGRIP1LQ68CZ1 1315 aa21.76■■□□□ 1.07
COL16A1-208ENST00000468459 ACIN1Q9UKV3 1341 aaKnown RBP21.76■■□□□ 1.07
COL16A1-208ENST00000468459 VGFO15240 615 aaPredicted RBP21.75■■□□□ 1.07
COL16A1-208ENST00000468459 POTEAQ6S8J7 498 aa21.74■■□□□ 1.07
COL16A1-208ENST00000468459 COL16A1Q07092 1604 aaPredicted RBP21.73■■□□□ 1.07
COL16A1-208ENST00000468459 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
COL16A1-208ENST00000468459 MST1RQ04912 1400 aa21.72■■□□□ 1.07
COL16A1-208ENST00000468459 PHLPP1O60346 1717 aa21.7■■□□□ 1.06
COL16A1-208ENST00000468459 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
COL16A1-208ENST00000468459 PRAG1Q86YV5 1406 aa21.69■■□□□ 1.06
COL16A1-208ENST00000468459 SPATA31A6Q5VVP1 1343 aa21.68■■□□□ 1.06
COL16A1-208ENST00000468459 ROBO2Q9HCK4 1378 aa21.68■■□□□ 1.06
COL16A1-208ENST00000468459 PTCH1Q13635 1447 aa21.68■■□□□ 1.06
COL16A1-208ENST00000468459 KIF1BO60333 1816 aa21.66■■□□□ 1.06
COL16A1-208ENST00000468459 SPATA31E1Q6ZUB1 1445 aa21.66■■□□□ 1.06
COL16A1-208ENST00000468459 LRP6O75581 1613 aa21.66■■□□□ 1.06
COL16A1-208ENST00000468459 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
COL16A1-208ENST00000468459 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
COL16A1-208ENST00000468459 ANKRD30BQ9BXX2 1392 aa21.63■■□□□ 1.05
COL16A1-208ENST00000468459 ADGRF5Q8IZF2 1346 aa21.63■■□□□ 1.05
COL16A1-208ENST00000468459 SETD1AO15047 1707 aaKnown RBP21.63■■□□□ 1.05
COL16A1-208ENST00000468459 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
COL16A1-208ENST00000468459 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
COL16A1-208ENST00000468459 C1orf167Q5SNV9 1468 aa21.59■■□□□ 1.05
COL16A1-208ENST00000468459 DDX17Q92841 729 aaKnown RBP21.59■■□□□ 1.05
COL16A1-208ENST00000468459 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.04
COL16A1-208ENST00000468459 PPLO60437 1756 aa21.57■■□□□ 1.04
COL16A1-208ENST00000468459 LRRC59Q96AG4 307 aaKnown RBP21.57■■□□□ 1.04
COL16A1-208ENST00000468459 SHPRHQ149N8 1683 aa21.56■■□□□ 1.04
COL16A1-208ENST00000468459 ORAI2Q96SN7 254 aa21.55■■□□□ 1.04
COL16A1-208ENST00000468459 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
COL16A1-208ENST00000468459 TECPR2O15040 1411 aa21.54■■□□□ 1.04
COL16A1-208ENST00000468459 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
COL16A1-208ENST00000468459 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
COL16A1-208ENST00000468459 PIK3C2GO75747 1445 aa21.53■■□□□ 1.04
COL16A1-208ENST00000468459 SOS2Q07890 1332 aaPredicted RBP21.53■■□□□ 1.04
COL16A1-208ENST00000468459 LRPPRCP42704 1394 aaKnown RBP21.52■■□□□ 1.04
COL16A1-208ENST00000468459 PNPLA6Q8IY17 1366 aa21.52■■□□□ 1.04
COL16A1-208ENST00000468459 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms