RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 PROX2Q3B8N5 592 aa9.29□□□□□ -0.92
U2AF1-207ENST00000468039 TJAP1Q5JTD0 557 aa9.29□□□□□ -0.92
U2AF1-207ENST00000468039 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
U2AF1-207ENST00000468039 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.29□□□□□ -0.92
U2AF1-207ENST00000468039 LRCH3Q96II8 777 aa9.27□□□□□ -0.93
U2AF1-207ENST00000468039 PTGDRQ13258 359 aa9.26□□□□□ -0.93
U2AF1-207ENST00000468039 HIC1Q14526 733 aa9.26□□□□□ -0.93
U2AF1-207ENST00000468039 SMARCA4P51532 1647 aa9.25□□□□□ -0.93
U2AF1-207ENST00000468039 COL9A1P20849 921 aa9.25□□□□□ -0.93
U2AF1-207ENST00000468039 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
U2AF1-207ENST00000468039 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
U2AF1-207ENST00000468039 ONECUT3O60422 494 aaPredicted RBP9.24□□□□□ -0.93
U2AF1-207ENST00000468039 ZC3H15Q8WU90 426 aaKnown RBP9.24□□□□□ -0.93
U2AF1-207ENST00000468039 GNPATO15228 680 aa9.23□□□□□ -0.93
U2AF1-207ENST00000468039 GGCXP38435 758 aa9.23□□□□□ -0.93
U2AF1-207ENST00000468039 PRSS12P56730 875 aa9.23□□□□□ -0.93
U2AF1-207ENST00000468039 CDCA7LQ96GN5 454 aa9.23□□□□□ -0.93
U2AF1-207ENST00000468039 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
U2AF1-207ENST00000468039 BAZ1AQ9NRL2 1556 aaPredicted RBP9.23□□□□□ -0.93
U2AF1-207ENST00000468039 MROH2BQ7Z745 1585 aa9.22□□□□□ -0.93
U2AF1-207ENST00000468039 FAM98CQ17RN3 349 aaKnown RBP9.22□□□□□ -0.93
U2AF1-207ENST00000468039 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
U2AF1-207ENST00000468039 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
U2AF1-207ENST00000468039 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
U2AF1-207ENST00000468039 PACS2Q86VP3 889 aa9.21□□□□□ -0.94
U2AF1-207ENST00000468039 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
U2AF1-207ENST00000468039 ATAD2BQ9ULI0 1458 aa9.21□□□□□ -0.94
U2AF1-207ENST00000468039 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
U2AF1-207ENST00000468039 TPRNQ4KMQ1 711 aa9.2□□□□□ -0.94
U2AF1-207ENST00000468039 GPR37O15354 613 aa9.19□□□□□ -0.94
U2AF1-207ENST00000468039 PPP4CP60510 307 aa9.19□□□□□ -0.94
U2AF1-207ENST00000468039 NFX1Q12986 1120 aaKnown RBP9.19□□□□□ -0.94
U2AF1-207ENST00000468039 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
U2AF1-207ENST00000468039 MTRQ99707 1265 aa9.19□□□□□ -0.94
U2AF1-207ENST00000468039 PRR20EP86478 221 aa9.18□□□□□ -0.94
U2AF1-207ENST00000468039 PRR20CP86479 221 aa9.18□□□□□ -0.94
U2AF1-207ENST00000468039 PRR20DP86480 221 aa9.18□□□□□ -0.94
U2AF1-207ENST00000468039 PRR20BP86481 221 aa9.18□□□□□ -0.94
U2AF1-207ENST00000468039 PRR20AP86496 221 aa9.18□□□□□ -0.94
U2AF1-207ENST00000468039 SEPT9Q9UHD8 586 aaPredicted RBP9.18□□□□□ -0.94
U2AF1-207ENST00000468039 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
U2AF1-207ENST00000468039 ZMYND10O75800 440 aa9.17□□□□□ -0.94
U2AF1-207ENST00000468039 NCAPD3P42695 1498 aa9.16□□□□□ -0.94
U2AF1-207ENST00000468039 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
U2AF1-207ENST00000468039 BARGINQ6ZT62 677 aa9.16□□□□□ -0.94
U2AF1-207ENST00000468039 TMUB1Q9BVT8 246 aa9.16□□□□□ -0.94
U2AF1-207ENST00000468039 TSKSQ9UJT2 592 aa9.16□□□□□ -0.94
U2AF1-207ENST00000468039 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
U2AF1-207ENST00000468039 MINK1Q8N4C8 1332 aaPredicted RBP9.15□□□□□ -0.94
U2AF1-207ENST00000468039 FAM187AA6NFU0 413 aa9.14□□□□□ -0.95
U2AF1-207ENST00000468039 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
U2AF1-207ENST00000468039 PNMA3Q9UL41 463 aa9.14□□□□□ -0.95
U2AF1-207ENST00000468039 PEG3Q9GZU2 1588 aa9.13□□□□□ -0.95
U2AF1-207ENST00000468039 OATP04181 439 aa9.13□□□□□ -0.95
U2AF1-207ENST00000468039 FECHP22830 423 aa9.13□□□□□ -0.95
U2AF1-207ENST00000468039 TTC13Q8NBP0 860 aa9.13□□□□□ -0.95
U2AF1-207ENST00000468039 AAASQ9NRG9 546 aa9.13□□□□□ -0.95
U2AF1-207ENST00000468039 BAZ1BQ9UIG0 1483 aaKnown RBP9.13□□□□□ -0.95
U2AF1-207ENST00000468039 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
U2AF1-207ENST00000468039 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
U2AF1-207ENST00000468039 TATDN2Q93075 761 aa9.12□□□□□ -0.95
U2AF1-207ENST00000468039 WIZO95785 1651 aa9.12□□□□□ -0.95
U2AF1-207ENST00000468039 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
U2AF1-207ENST00000468039 IRF6O14896 467 aa9.11□□□□□ -0.95
U2AF1-207ENST00000468039 FAM198AQ9UFP1 575 aa9.11□□□□□ -0.95
U2AF1-207ENST00000468039 ST8SIA5O15466 376 aa9.1□□□□□ -0.95
U2AF1-207ENST00000468039 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
U2AF1-207ENST00000468039 SLC19A1P41440 591 aa9.09□□□□□ -0.95
U2AF1-207ENST00000468039 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
U2AF1-207ENST00000468039 ZNF516Q92618 1163 aa9.09□□□□□ -0.95
U2AF1-207ENST00000468039 AK7Q96M32 723 aa9.09□□□□□ -0.95
U2AF1-207ENST00000468039 SMAPO00193 183 aa9.08□□□□□ -0.96
U2AF1-207ENST00000468039 FAM161AQ3B820 660 aa9.08□□□□□ -0.96
U2AF1-207ENST00000468039 CCDC102AQ96A19 550 aa9.08□□□□□ -0.96
U2AF1-207ENST00000468039 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
U2AF1-207ENST00000468039 ZNF598Q86UK7 904 aaKnown RBP9.07□□□□□ -0.96
U2AF1-207ENST00000468039 C11orf95C9JLR9 678 aaPredicted RBP9.06□□□□□ -0.96
U2AF1-207ENST00000468039 SLC4A3P48751 1232 aa9.06□□□□□ -0.96
U2AF1-207ENST00000468039 METTL3Q86U44 580 aaKnown RBP9.06□□□□□ -0.96
U2AF1-207ENST00000468039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.05□□□□□ -0.96
U2AF1-207ENST00000468039 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-207ENST00000468039 DNAJB2P25686 324 aa9.05□□□□□ -0.96
U2AF1-207ENST00000468039 SPRYD7Q5W111 196 aa9.05□□□□□ -0.96
U2AF1-207ENST00000468039 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
U2AF1-207ENST00000468039 EYA1Q99502 592 aa9.05□□□□□ -0.96
U2AF1-207ENST00000468039 CRIPAKQ8N1N5 446 aa9.04□□□□□ -0.96
U2AF1-207ENST00000468039 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
U2AF1-207ENST00000468039 RCCD1A6NED2 376 aa9.03□□□□□ -0.96
U2AF1-207ENST00000468039 C3orf80F5H4A9 247 aa9.02□□□□□ -0.97
U2AF1-207ENST00000468039 TOP2AP11388 1531 aaKnown RBP9□□□□□ -0.97
U2AF1-207ENST00000468039 TRIM66O15016 1216 aa9□□□□□ -0.97
U2AF1-207ENST00000468039 TTLL12Q14166 644 aaPredicted RBP9□□□□□ -0.97
U2AF1-207ENST00000468039 NESP48681 1621 aa9□□□□□ -0.97
U2AF1-207ENST00000468039 CLCN1P35523 988 aa8.99□□□□□ -0.97
U2AF1-207ENST00000468039 TMEM134Q9H6X4 195 aa8.99□□□□□ -0.97
U2AF1-207ENST00000468039 GMPR2Q9P2T1 348 aaKnown RBP8.99□□□□□ -0.97
U2AF1-207ENST00000468039 TERTO14746 1132 aaKnown RBP8.98□□□□□ -0.97
U2AF1-207ENST00000468039 GDF9O60383 454 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 RNF40O75150 1001 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 MDM2Q00987 491 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms