RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
LCA5-203ENST00000467898 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
LCA5-203ENST00000467898 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
LCA5-203ENST00000467898 TONSLQ96HA7 1378 aa11.84□□□□□ -0.51
LCA5-203ENST00000467898 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.84□□□□□ -0.51
LCA5-203ENST00000467898 ANKRD30BQ9BXX2 1392 aa11.82□□□□□ -0.52
LCA5-203ENST00000467898 MYO5CQ9NQX4 1742 aa11.82□□□□□ -0.52
LCA5-203ENST00000467898 VGLL3A8MV65 326 aa11.82□□□□□ -0.52
LCA5-203ENST00000467898 XRCC6P12956 609 aaKnown RBP eCLIP11.82□□□□□ -0.52
LCA5-203ENST00000467898 GRIPAP1Q4V328 841 aa11.82□□□□□ -0.52
LCA5-203ENST00000467898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.82□□□□□ -0.52
LCA5-203ENST00000467898 C9orf84Q5VXU9 1444 aa11.81□□□□□ -0.52
LCA5-203ENST00000467898 RIPK4P57078 832 aa11.81□□□□□ -0.52
LCA5-203ENST00000467898 DNTTIP2Q5QJE6 756 aaKnown RBP11.81□□□□□ -0.52
LCA5-203ENST00000467898 CCDC94Q9BW85 323 aaPredicted RBP11.81□□□□□ -0.52
LCA5-203ENST00000467898 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
LCA5-203ENST00000467898 RPRD2Q5VT52 1461 aaKnown RBP11.8□□□□□ -0.52
LCA5-203ENST00000467898 KDM5DQ9BY66 1539 aa11.8□□□□□ -0.52
LCA5-203ENST00000467898 MRE11P49959 708 aa11.8□□□□□ -0.52
LCA5-203ENST00000467898 MAST1Q9Y2H9 1570 aa11.8□□□□□ -0.52
LCA5-203ENST00000467898 ANKRD30AQ9BXX3 1397 aa11.8□□□□□ -0.52
LCA5-203ENST00000467898 OFD1O75665 1012 aa11.8□□□□□ -0.52
LCA5-203ENST00000467898 DNAJC2Q99543 621 aaKnown RBP11.8□□□□□ -0.52
LCA5-203ENST00000467898 YY1AP1Q9H869 796 aa11.79□□□□□ -0.52
LCA5-203ENST00000467898 TEX14Q8IWB6 1497 aa11.79□□□□□ -0.52
LCA5-203ENST00000467898 WWC1Q8IX03 1113 aa11.79□□□□□ -0.52
LCA5-203ENST00000467898 DYNC1I1O14576 645 aa11.78□□□□□ -0.52
LCA5-203ENST00000467898 CCDC141Q6ZP82 1450 aa11.78□□□□□ -0.52
LCA5-203ENST00000467898 POGKQ9P215 609 aa11.78□□□□□ -0.52
LCA5-203ENST00000467898 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
LCA5-203ENST00000467898 ANKRD50Q9ULJ7 1429 aa11.78□□□□□ -0.52
LCA5-203ENST00000467898 SYCP2Q9BX26 1530 aa11.78□□□□□ -0.52
LCA5-203ENST00000467898 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.52
LCA5-203ENST00000467898 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
LCA5-203ENST00000467898 FAM193AP78312 1265 aa11.76□□□□□ -0.53
LCA5-203ENST00000467898 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
LCA5-203ENST00000467898 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
LCA5-203ENST00000467898 PSEN1P49768 467 aa11.76□□□□□ -0.53
LCA5-203ENST00000467898 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
LCA5-203ENST00000467898 HNRNPMP52272 730 aaKnown RBP eCLIP11.75□□□□□ -0.53
LCA5-203ENST00000467898 PLXNC1O60486 1568 aa11.75□□□□□ -0.53
LCA5-203ENST00000467898 KIAA1107Q9UPP5 1409 aa11.75□□□□□ -0.53
LCA5-203ENST00000467898 MCCP23508 829 aa11.74□□□□□ -0.53
LCA5-203ENST00000467898 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
LCA5-203ENST00000467898 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
LCA5-203ENST00000467898 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
LCA5-203ENST00000467898 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
LCA5-203ENST00000467898 GEMIN8Q9NWZ8 242 aaKnown RBP11.73□□□□□ -0.53
LCA5-203ENST00000467898 HMGB1P09429 215 aaKnown RBP11.73□□□□□ -0.53
LCA5-203ENST00000467898 PLCH2O75038 1416 aa11.73□□□□□ -0.53
LCA5-203ENST00000467898 UNC13BO14795 1591 aa11.73□□□□□ -0.53
LCA5-203ENST00000467898 KIF15Q9NS87 1388 aa11.72□□□□□ -0.53
LCA5-203ENST00000467898 PHF14O94880 888 aa11.72□□□□□ -0.53
LCA5-203ENST00000467898 L3MBTL2Q969R5 705 aa11.72□□□□□ -0.53
LCA5-203ENST00000467898 ABCC1P33527 1531 aa11.72□□□□□ -0.53
LCA5-203ENST00000467898 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
LCA5-203ENST00000467898 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
LCA5-203ENST00000467898 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.53
LCA5-203ENST00000467898 PLEKHH2Q8IVE3 1493 aa11.71□□□□□ -0.53
LCA5-203ENST00000467898 ARAP3Q8WWN8 1544 aa11.71□□□□□ -0.54
LCA5-203ENST00000467898 APPP05067 770 aa11.71□□□□□ -0.54
LCA5-203ENST00000467898 TSPYL1Q9H0U9 437 aa11.7□□□□□ -0.54
LCA5-203ENST00000467898 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.7□□□□□ -0.54
LCA5-203ENST00000467898 CLSTN1O94985 981 aa11.69□□□□□ -0.54
LCA5-203ENST00000467898 TSPY4P0CV99 314 aa11.69□□□□□ -0.54
LCA5-203ENST00000467898 TSPY10P0CW01 314 aa11.69□□□□□ -0.54
LCA5-203ENST00000467898 CEP120Q8N960 986 aa11.69□□□□□ -0.54
LCA5-203ENST00000467898 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
LCA5-203ENST00000467898 ABCA9Q8IUA7 1624 aa11.68□□□□□ -0.54
LCA5-203ENST00000467898 RALBP1Q15311 655 aa11.68□□□□□ -0.54
LCA5-203ENST00000467898 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
LCA5-203ENST00000467898 VIRMAQ69YN4 1812 aaKnown RBP11.68□□□□□ -0.54
LCA5-203ENST00000467898 FAM135AQ9P2D6 1515 aa11.68□□□□□ -0.54
LCA5-203ENST00000467898 PANK2Q9BZ23 570 aa11.68□□□□□ -0.54
LCA5-203ENST00000467898 NUP155O75694 1391 aa11.67□□□□□ -0.54
LCA5-203ENST00000467898 WDR7Q9Y4E6 1490 aa11.67□□□□□ -0.54
LCA5-203ENST00000467898 POLR1AO95602 1720 aaPredicted RBP11.67□□□□□ -0.54
LCA5-203ENST00000467898 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
LCA5-203ENST00000467898 SLC52A1Q9NWF4 448 aa11.67□□□□□ -0.54
LCA5-203ENST00000467898 IQGAP3Q86VI3 1631 aa11.67□□□□□ -0.54
LCA5-203ENST00000467898 MAGI2Q86UL8 1455 aa11.67□□□□□ -0.54
LCA5-203ENST00000467898 PKD2Q13563 968 aa11.67□□□□□ -0.54
LCA5-203ENST00000467898 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
LCA5-203ENST00000467898 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
LCA5-203ENST00000467898 POLR3GLQ9BT43 218 aa11.65□□□□□ -0.54
LCA5-203ENST00000467898 GRPEL1Q9HAV7 217 aa11.65□□□□□ -0.54
LCA5-203ENST00000467898 DUOX2Q9NRD8 1548 aa11.65□□□□□ -0.54
LCA5-203ENST00000467898 UQCRHLA0A096LP55 91 aa11.65□□□□□ -0.54
LCA5-203ENST00000467898 UQCRHP07919 91 aa11.65□□□□□ -0.54
LCA5-203ENST00000467898 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
LCA5-203ENST00000467898 SPATA31E1Q6ZUB1 1445 aa11.65□□□□□ -0.54
LCA5-203ENST00000467898 TRAPPC8Q9Y2L5 1435 aa11.64□□□□□ -0.55
LCA5-203ENST00000467898 SOX12O15370 315 aa11.64□□□□□ -0.55
LCA5-203ENST00000467898 HS1BP3Q53T59 392 aa11.64□□□□□ -0.55
LCA5-203ENST00000467898 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
LCA5-203ENST00000467898 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
LCA5-203ENST00000467898 UHRF1BP1Q6BDS2 1440 aa11.63□□□□□ -0.55
LCA5-203ENST00000467898 ERBINQ96RT1 1412 aa11.63□□□□□ -0.55
LCA5-203ENST00000467898 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
LCA5-203ENST00000467898 PLCD4Q9BRC7 762 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms