RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 GJA5P36382 358 aa10.08□□□□□ -0.8
GAPVD1-211ENST00000467707 SMAPO00193 183 aa10.07□□□□□ -0.8
GAPVD1-211ENST00000467707 CLK2P49760 499 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-211ENST00000467707 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-211ENST00000467707 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
GAPVD1-211ENST00000467707 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
GAPVD1-211ENST00000467707 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
GAPVD1-211ENST00000467707 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
GAPVD1-211ENST00000467707 TK2O00142 265 aa10.06□□□□□ -0.8
GAPVD1-211ENST00000467707 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
GAPVD1-211ENST00000467707 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
GAPVD1-211ENST00000467707 VPS9D1Q9Y2B5 631 aa10.06□□□□□ -0.8
GAPVD1-211ENST00000467707 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
GAPVD1-211ENST00000467707 POTEEQ6S8J3 1075 aa10.05□□□□□ -0.8
GAPVD1-211ENST00000467707 MARVELD3Q96A59 401 aa10.05□□□□□ -0.8
GAPVD1-211ENST00000467707 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
GAPVD1-211ENST00000467707 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
GAPVD1-211ENST00000467707 USP46P62068 366 aa10.04□□□□□ -0.8
GAPVD1-211ENST00000467707 DMRTA1Q5VZB9 504 aa10.04□□□□□ -0.8
GAPVD1-211ENST00000467707 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
GAPVD1-211ENST00000467707 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
GAPVD1-211ENST00000467707 AXIN2Q9Y2T1 843 aa10.03□□□□□ -0.8
GAPVD1-211ENST00000467707 SPTLC1O15269 473 aa10.02□□□□□ -0.81
GAPVD1-211ENST00000467707 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.81
GAPVD1-211ENST00000467707 SLF2Q8IX21 1173 aa10.02□□□□□ -0.81
GAPVD1-211ENST00000467707 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
GAPVD1-211ENST00000467707 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-211ENST00000467707 KDM4AO75164 1064 aa10.01□□□□□ -0.81
GAPVD1-211ENST00000467707 SWT1Q5T5J6 900 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-211ENST00000467707 PROCA1Q8NCQ7 364 aaPredicted RBP10.01□□□□□ -0.81
GAPVD1-211ENST00000467707 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
GAPVD1-211ENST00000467707 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
GAPVD1-211ENST00000467707 GCGRP47871 477 aa10□□□□□ -0.81
GAPVD1-211ENST00000467707 BHMG1C9JSJ3 638 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-211ENST00000467707 PPP2R2DQ66LE6 453 aa9.99□□□□□ -0.81
GAPVD1-211ENST00000467707 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-211ENST00000467707 BANK1Q8NDB2 785 aa9.99□□□□□ -0.81
GAPVD1-211ENST00000467707 TMEM259Q4ZIN3 620 aa9.98□□□□□ -0.81
GAPVD1-211ENST00000467707 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
GAPVD1-211ENST00000467707 GRIPAP1Q4V328 841 aa9.97□□□□□ -0.81
GAPVD1-211ENST00000467707 MRPL50Q8N5N7 158 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-211ENST00000467707 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
GAPVD1-211ENST00000467707 MOXD2PA6NHM9 499 aa9.96□□□□□ -0.82
GAPVD1-211ENST00000467707 MCM6Q14566 821 aa9.96□□□□□ -0.82
GAPVD1-211ENST00000467707 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
GAPVD1-211ENST00000467707 SLC10A3P09131 477 aa9.95□□□□□ -0.82
GAPVD1-211ENST00000467707 RFC5P40937 340 aa9.95□□□□□ -0.82
GAPVD1-211ENST00000467707 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
GAPVD1-211ENST00000467707 SAMD7Q7Z3H4 446 aa9.95□□□□□ -0.82
GAPVD1-211ENST00000467707 SPDYE5A6NIY4 337 aa9.94□□□□□ -0.82
GAPVD1-211ENST00000467707 HOXA2O43364 376 aa9.94□□□□□ -0.82
GAPVD1-211ENST00000467707 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
GAPVD1-211ENST00000467707 SOCS7O14512 581 aa9.93□□□□□ -0.82
GAPVD1-211ENST00000467707 UBTFP17480 764 aaKnown RBP9.93□□□□□ -0.82
GAPVD1-211ENST00000467707 A6NJR5 290 aa9.92□□□□□ -0.82
GAPVD1-211ENST00000467707 APBB1O00213 710 aa9.92□□□□□ -0.82
GAPVD1-211ENST00000467707 LILRB3O75022 631 aa9.92□□□□□ -0.82
GAPVD1-211ENST00000467707 KMT5BQ4FZB7 885 aa9.92□□□□□ -0.82
GAPVD1-211ENST00000467707 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
GAPVD1-211ENST00000467707 STAC3Q96MF2 364 aa9.92□□□□□ -0.82
GAPVD1-211ENST00000467707 PRR14Q9BWN1 585 aa9.92□□□□□ -0.82
GAPVD1-211ENST00000467707 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
GAPVD1-211ENST00000467707 FDX1P10109 184 aa9.91□□□□□ -0.82
GAPVD1-211ENST00000467707 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
GAPVD1-211ENST00000467707 ZBTB3Q9H5J0 574 aa9.91□□□□□ -0.82
GAPVD1-211ENST00000467707 HRO43593 1189 aa9.9□□□□□ -0.82
GAPVD1-211ENST00000467707 CFHP08603 1231 aa9.9□□□□□ -0.82
GAPVD1-211ENST00000467707 NDUFV2P19404 249 aa9.9□□□□□ -0.82
GAPVD1-211ENST00000467707 NUTM2BA6NNL0 878 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-211ENST00000467707 NUTM2EB1AL46 878 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-211ENST00000467707 RAD21O60216 631 aa9.89□□□□□ -0.83
GAPVD1-211ENST00000467707 LCE2DQ5TA82 110 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-211ENST00000467707 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-211ENST00000467707 NUTM2AQ8IVF1 878 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-211ENST00000467707 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-211ENST00000467707 SUPT5HO00267 1087 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-211ENST00000467707 RNF40O75150 1001 aa9.88□□□□□ -0.83
GAPVD1-211ENST00000467707 ATP6V1AP38606 617 aa9.88□□□□□ -0.83
GAPVD1-211ENST00000467707 CSPP1Q1MSJ5 1256 aa9.88□□□□□ -0.83
GAPVD1-211ENST00000467707 ANKK1Q8NFD2 765 aa9.88□□□□□ -0.83
GAPVD1-211ENST00000467707 PCDHB15Q9Y5E8 787 aa9.88□□□□□ -0.83
GAPVD1-211ENST00000467707 GOLGA8CPA6NN73 597 aa9.87□□□□□ -0.83
GAPVD1-211ENST00000467707 FUT2Q10981 343 aa9.87□□□□□ -0.83
GAPVD1-211ENST00000467707 QPCTQ16769 361 aa9.87□□□□□ -0.83
GAPVD1-211ENST00000467707 ARXQ96QS3 562 aa9.87□□□□□ -0.83
GAPVD1-211ENST00000467707 MTMR2Q13614 643 aa9.86□□□□□ -0.83
GAPVD1-211ENST00000467707 PRM3Q9NNZ6 103 aa9.86□□□□□ -0.83
GAPVD1-211ENST00000467707 ACTN4O43707 911 aaKnown RBP9.85□□□□□ -0.83
GAPVD1-211ENST00000467707 HRCP23327 699 aa9.85□□□□□ -0.83
GAPVD1-211ENST00000467707 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
GAPVD1-211ENST00000467707 SOWAHBA6NEL2 793 aa9.83□□□□□ -0.84
GAPVD1-211ENST00000467707 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-211ENST00000467707 FBXO31Q5XUX0 539 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-211ENST00000467707 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
GAPVD1-211ENST00000467707 AP1G2O75843 785 aa9.82□□□□□ -0.84
GAPVD1-211ENST00000467707 Q3C1V9 767 aa9.82□□□□□ -0.84
GAPVD1-211ENST00000467707 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-211ENST00000467707 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
GAPVD1-211ENST00000467707 CLUAP1Q96AJ1 413 aa9.82□□□□□ -0.84
GAPVD1-211ENST00000467707 TRAK2O60296 914 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms