RNA–Protein interactions for RNA: ENST00000467706.1

NOD1-207, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-207ENST00000467706 A2ML1A8K2U0 1454 aa17.27■□□□□ 0.36
NOD1-207ENST00000467706 NLRP1Q9C000 1473 aa17.27■□□□□ 0.36
NOD1-207ENST00000467706 NRXN1Q9ULB1 1477 aa17.27■□□□□ 0.36
NOD1-207ENST00000467706 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
NOD1-207ENST00000467706 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.35
NOD1-207ENST00000467706 KDM5AP29375 1690 aaKnown RBP17.26■□□□□ 0.35
NOD1-207ENST00000467706 LAMC1P11047 1609 aa17.26■□□□□ 0.35
NOD1-207ENST00000467706 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
NOD1-207ENST00000467706 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
NOD1-207ENST00000467706 CARD11Q9BXL7 1154 aa17.25■□□□□ 0.35
NOD1-207ENST00000467706 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
NOD1-207ENST00000467706 USP47Q96K76 1375 aa17.24■□□□□ 0.35
NOD1-207ENST00000467706 UBR1Q8IWV7 1749 aa17.24■□□□□ 0.35
NOD1-207ENST00000467706 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
NOD1-207ENST00000467706 MYO3AQ8NEV4 1616 aa17.23■□□□□ 0.35
NOD1-207ENST00000467706 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
NOD1-207ENST00000467706 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
NOD1-207ENST00000467706 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
NOD1-207ENST00000467706 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
NOD1-207ENST00000467706 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.34
NOD1-207ENST00000467706 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
NOD1-207ENST00000467706 PTPRMP28827 1452 aa17.18■□□□□ 0.34
NOD1-207ENST00000467706 CFAP70Q5T0N1 1121 aa17.17■□□□□ 0.34
NOD1-207ENST00000467706 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
NOD1-207ENST00000467706 SETBP1Q9Y6X0 1596 aa17.17■□□□□ 0.34
NOD1-207ENST00000467706 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
NOD1-207ENST00000467706 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
NOD1-207ENST00000467706 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
NOD1-207ENST00000467706 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
NOD1-207ENST00000467706 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
NOD1-207ENST00000467706 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
NOD1-207ENST00000467706 ZNF142P52746 1687 aaPredicted RBP17.14■□□□□ 0.33
NOD1-207ENST00000467706 ADGRB1O14514 1584 aa17.12■□□□□ 0.33
NOD1-207ENST00000467706 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
NOD1-207ENST00000467706 EIF3AQ14152 1382 aaKnown RBP17.12■□□□□ 0.33
NOD1-207ENST00000467706 SLIT1O75093 1534 aa17.11■□□□□ 0.33
NOD1-207ENST00000467706 POLR1AO95602 1720 aaPredicted RBP17.11■□□□□ 0.33
NOD1-207ENST00000467706 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
NOD1-207ENST00000467706 THEMISQ8N1K5 641 aaPredicted RBP17.11■□□□□ 0.33
NOD1-207ENST00000467706 SETD1BQ9UPS6 1966 aaKnown RBP17.11■□□□□ 0.33
NOD1-207ENST00000467706 ARHGAP23Q9P227 1491 aa17.11■□□□□ 0.33
NOD1-207ENST00000467706 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
NOD1-207ENST00000467706 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
NOD1-207ENST00000467706 EID1Q9Y6B2 187 aa17.08■□□□□ 0.32
NOD1-207ENST00000467706 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
NOD1-207ENST00000467706 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
NOD1-207ENST00000467706 WASHC2AQ641Q2 1341 aa17.07■□□□□ 0.32
NOD1-207ENST00000467706 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
NOD1-207ENST00000467706 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
NOD1-207ENST00000467706 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
NOD1-207ENST00000467706 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
NOD1-207ENST00000467706 PLEKHG1Q9ULL1 1385 aa17.05■□□□□ 0.32
NOD1-207ENST00000467706 BCANQ96GW7 911 aa17.05■□□□□ 0.32
NOD1-207ENST00000467706 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
NOD1-207ENST00000467706 C11orf95C9JLR9 678 aaPredicted RBP17.04■□□□□ 0.32
NOD1-207ENST00000467706 LTKP29376 864 aa17.04■□□□□ 0.32
NOD1-207ENST00000467706 DDX10Q13206 875 aaKnown RBP17.04■□□□□ 0.32
NOD1-207ENST00000467706 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.32
NOD1-207ENST00000467706 KDM4FA0A1W2PPD8 638 aa17.02■□□□□ 0.32
NOD1-207ENST00000467706 TESK2Q96S53 571 aa17.02■□□□□ 0.32
NOD1-207ENST00000467706 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
NOD1-207ENST00000467706 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
NOD1-207ENST00000467706 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
NOD1-207ENST00000467706 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
NOD1-207ENST00000467706 TMF1P82094 1093 aa17■□□□□ 0.31
NOD1-207ENST00000467706 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
NOD1-207ENST00000467706 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
NOD1-207ENST00000467706 STK26Q9P289 416 aa16.99■□□□□ 0.31
NOD1-207ENST00000467706 DISP3Q9P2K9 1392 aa16.99■□□□□ 0.31
NOD1-207ENST00000467706 DIP2AQ14689 1571 aa16.98■□□□□ 0.31
NOD1-207ENST00000467706 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
NOD1-207ENST00000467706 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
NOD1-207ENST00000467706 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
NOD1-207ENST00000467706 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
NOD1-207ENST00000467706 METP08581 1390 aa16.97■□□□□ 0.31
NOD1-207ENST00000467706 MED14O60244 1454 aa16.97■□□□□ 0.31
NOD1-207ENST00000467706 DLC1Q96QB1 1528 aa16.96■□□□□ 0.31
NOD1-207ENST00000467706 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.3
NOD1-207ENST00000467706 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
NOD1-207ENST00000467706 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
NOD1-207ENST00000467706 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
NOD1-207ENST00000467706 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
NOD1-207ENST00000467706 PRAM1Q96QH2 718 aa16.92■□□□□ 0.3
NOD1-207ENST00000467706 POGKQ9P215 609 aa16.92■□□□□ 0.3
NOD1-207ENST00000467706 TECPR2O15040 1411 aa16.92■□□□□ 0.3
NOD1-207ENST00000467706 CPS1P31327 1500 aa16.91■□□□□ 0.3
NOD1-207ENST00000467706 NPHP4O75161 1426 aaPredicted RBP16.9■□□□□ 0.3
NOD1-207ENST00000467706 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
NOD1-207ENST00000467706 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
NOD1-207ENST00000467706 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
NOD1-207ENST00000467706 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
NOD1-207ENST00000467706 PTPRUQ92729 1446 aa16.87■□□□□ 0.29
NOD1-207ENST00000467706 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
NOD1-207ENST00000467706 MIER1Q8N108 512 aa16.87■□□□□ 0.29
NOD1-207ENST00000467706 EVC2Q86UK5 1308 aa16.87■□□□□ 0.29
NOD1-207ENST00000467706 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
NOD1-207ENST00000467706 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
NOD1-207ENST00000467706 XRN1Q8IZH2 1706 aaKnown RBP16.86■□□□□ 0.29
NOD1-207ENST00000467706 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
NOD1-207ENST00000467706 WAPLQ7Z5K2 1190 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms