RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 IFT172Q9UG01 1749 aa23.9■■□□□ 1.42
NELFA-213ENST00000467661 ABCA6Q8N139 1617 aa23.9■■□□□ 1.42
NELFA-213ENST00000467661 YEATS2Q9ULM3 1422 aa23.89■■□□□ 1.41
NELFA-213ENST00000467661 EIF3AQ14152 1382 aaKnown RBP23.88■■□□□ 1.41
NELFA-213ENST00000467661 PARD3Q8TEW0 1356 aa23.88■■□□□ 1.41
NELFA-213ENST00000467661 ARHGEF40Q8TER5 1519 aa23.87■■□□□ 1.41
NELFA-213ENST00000467661 DIP2CQ9Y2E4 1556 aa23.87■■□□□ 1.41
NELFA-213ENST00000467661 PNISRQ8TF01 805 aaKnown RBP23.87■■□□□ 1.41
NELFA-213ENST00000467661 ERICH6BQ5W0A0 696 aa23.85■■□□□ 1.41
NELFA-213ENST00000467661 UGGT1Q9NYU2 1555 aa23.85■■□□□ 1.41
NELFA-213ENST00000467661 CDCA8Q53HL2 280 aa23.84■■□□□ 1.41
NELFA-213ENST00000467661 MROH2AA6NES4 1674 aa23.84■■□□□ 1.41
NELFA-213ENST00000467661 PER1O15534 1290 aaPredicted RBP23.84■■□□□ 1.41
NELFA-213ENST00000467661 LRPPRCP42704 1394 aaKnown RBP23.83■■□□□ 1.41
NELFA-213ENST00000467661 NLRP13Q86W25 1043 aa23.83■■□□□ 1.41
NELFA-213ENST00000467661 ADGRB3O60242 1522 aa23.83■■□□□ 1.41
NELFA-213ENST00000467661 SLC24A1O60721 1099 aa23.81■■□□□ 1.4
NELFA-213ENST00000467661 SYNMO15061 1565 aa23.81■■□□□ 1.4
NELFA-213ENST00000467661 SMG6Q86US8 1419 aaKnown RBP23.8■■□□□ 1.4
NELFA-213ENST00000467661 ABCC3O15438 1527 aa23.8■■□□□ 1.4
NELFA-213ENST00000467661 SIGLEC1Q9BZZ2 1709 aa23.79■■□□□ 1.4
NELFA-213ENST00000467661 CAMSAP1Q5T5Y3 1602 aa23.79■■□□□ 1.4
NELFA-213ENST00000467661 NPATQ14207 1427 aa23.79■■□□□ 1.4
NELFA-213ENST00000467661 NRXN1Q9ULB1 1477 aa23.79■■□□□ 1.4
NELFA-213ENST00000467661 PANK3Q9H999 370 aa23.79■■□□□ 1.4
NELFA-213ENST00000467661 REREQ9P2R6 1566 aa23.78■■□□□ 1.4
NELFA-213ENST00000467661 ZC3H13Q5T200 1668 aaKnown RBP23.77■■□□□ 1.4
NELFA-213ENST00000467661 KDM5AP29375 1690 aaKnown RBP23.76■■□□□ 1.39
NELFA-213ENST00000467661 GGT6Q6P531 493 aa23.76■■□□□ 1.39
NELFA-213ENST00000467661 PPLO60437 1756 aa23.74■■□□□ 1.39
NELFA-213ENST00000467661 SETBP1Q9Y6X0 1596 aa23.74■■□□□ 1.39
NELFA-213ENST00000467661 NUDCQ9Y266 331 aa23.73■■□□□ 1.39
NELFA-213ENST00000467661 MYO3AQ8NEV4 1616 aa23.73■■□□□ 1.39
NELFA-213ENST00000467661 INSRP06213 1382 aa23.71■■□□□ 1.39
NELFA-213ENST00000467661 ADGRF5Q8IZF2 1346 aa23.71■■□□□ 1.39
NELFA-213ENST00000467661 MYOM1P52179 1685 aa23.7■■□□□ 1.39
NELFA-213ENST00000467661 RPGRIP1LQ68CZ1 1315 aa23.7■■□□□ 1.38
NELFA-213ENST00000467661 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
NELFA-213ENST00000467661 NOS1P29475 1434 aa23.7■■□□□ 1.38
NELFA-213ENST00000467661 CC2D1BQ5T0F9 858 aaKnown RBP23.69■■□□□ 1.38
NELFA-213ENST00000467661 TSHZ2Q9NRE2 1034 aa23.69■■□□□ 1.38
NELFA-213ENST00000467661 AGLP35573 1532 aa23.69■■□□□ 1.38
NELFA-213ENST00000467661 PIK3C2BO00750 1634 aa23.68■■□□□ 1.38
NELFA-213ENST00000467661 ARHGAP31Q2M1Z3 1444 aa23.68■■□□□ 1.38
NELFA-213ENST00000467661 KNSTRNQ9Y448 316 aa23.67■■□□□ 1.38
NELFA-213ENST00000467661 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
NELFA-213ENST00000467661 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
NELFA-213ENST00000467661 IRX6P78412 446 aaPredicted RBP23.66■■□□□ 1.38
NELFA-213ENST00000467661 SBNO2Q9Y2G9 1366 aa23.65■■□□□ 1.38
NELFA-213ENST00000467661 PPP4R2Q9NY27 417 aa23.65■■□□□ 1.38
NELFA-213ENST00000467661 ASXL1Q8IXJ9 1541 aa23.65■■□□□ 1.38
NELFA-213ENST00000467661 PIK3C2GO75747 1445 aa23.65■■□□□ 1.38
NELFA-213ENST00000467661 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
NELFA-213ENST00000467661 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
NELFA-213ENST00000467661 BLMP54132 1417 aaPredicted RBP23.6■■□□□ 1.37
NELFA-213ENST00000467661 PDE3BQ13370 1112 aa23.59■■□□□ 1.37
NELFA-213ENST00000467661 C14orf93Q9H972 538 aaKnown RBP23.59■■□□□ 1.37
NELFA-213ENST00000467661 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.37
NELFA-213ENST00000467661 RNF123Q5XPI4 1314 aa23.58■■□□□ 1.36
NELFA-213ENST00000467661 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
NELFA-213ENST00000467661 CENPJQ9HC77 1338 aaPredicted RBP23.56■■□□□ 1.36
NELFA-213ENST00000467661 QRICH2Q9H0J4 1663 aa23.56■■□□□ 1.36
NELFA-213ENST00000467661 NEXMIFQ5QGS0 1516 aa23.56■■□□□ 1.36
NELFA-213ENST00000467661 PREX1Q8TCU6 1659 aa23.54■■□□□ 1.36
NELFA-213ENST00000467661 VGFO15240 615 aaPredicted RBP23.53■■□□□ 1.36
NELFA-213ENST00000467661 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
NELFA-213ENST00000467661 SLC52A1Q9NWF4 448 aa23.53■■□□□ 1.36
NELFA-213ENST00000467661 ADAMTSL3P82987 1691 aa23.51■■□□□ 1.35
NELFA-213ENST00000467661 MLECQ14165 292 aa23.5■■□□□ 1.35
NELFA-213ENST00000467661 FER1L4A9Z1Z3 1794 aa23.5■■□□□ 1.35
NELFA-213ENST00000467661 ZFYVE9O95405 1425 aa23.5■■□□□ 1.35
NELFA-213ENST00000467661 TRAK1Q9UPV9 953 aa23.47■■□□□ 1.35
NELFA-213ENST00000467661 CLTCQ00610 1675 aaKnown RBP23.47■■□□□ 1.35
NELFA-213ENST00000467661 WDR43Q15061 677 aaKnown RBP eCLIP23.46■■□□□ 1.35
NELFA-213ENST00000467661 ARHGEF28Q8N1W1 1705 aaKnown RBP23.46■■□□□ 1.35
NELFA-213ENST00000467661 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
NELFA-213ENST00000467661 TMEM131LA2VDJ0 1609 aa23.45■■□□□ 1.34
NELFA-213ENST00000467661 SENP3-EIF4A1A0A087X0R7 540 aa23.45■■□□□ 1.34
NELFA-213ENST00000467661 IDI1Q13907 227 aa23.44■■□□□ 1.34
NELFA-213ENST00000467661 MYO5BQ9ULV0 1848 aa23.43■■□□□ 1.34
NELFA-213ENST00000467661 PUS7Q96PZ0 661 aaKnown RBP23.42■■□□□ 1.34
NELFA-213ENST00000467661 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
NELFA-213ENST00000467661 TMEM132EQ6IEE7 984 aa23.41■■□□□ 1.34
NELFA-213ENST00000467661 ADAMTS8Q9UP79 889 aa23.4■■□□□ 1.34
NELFA-213ENST00000467661 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
NELFA-213ENST00000467661 USP32Q8NFA0 1604 aa23.4■■□□□ 1.34
NELFA-213ENST00000467661 RCAN3Q9UKA8 241 aa23.39■■□□□ 1.34
NELFA-213ENST00000467661 B4GALNT3Q6L9W6 998 aa23.39■■□□□ 1.33
NELFA-213ENST00000467661 CARD14Q9BXL6 1004 aa23.37■■□□□ 1.33
NELFA-213ENST00000467661 EVC2Q86UK5 1308 aa23.36■■□□□ 1.33
NELFA-213ENST00000467661 RRP1P56182 461 aaKnown RBP23.36■■□□□ 1.33
NELFA-213ENST00000467661 ESF1Q9H501 851 aaKnown RBP23.36■■□□□ 1.33
NELFA-213ENST00000467661 C3P01024 1663 aa23.35■■□□□ 1.33
NELFA-213ENST00000467661 KDM4FA0A1W2PPD8 638 aa23.35■■□□□ 1.33
NELFA-213ENST00000467661 NSD3Q9BZ95 1437 aa23.34■■□□□ 1.33
NELFA-213ENST00000467661 RBM19Q9Y4C8 960 aaKnown RBP23.34■■□□□ 1.33
NELFA-213ENST00000467661 NUTM2DQ5VT03 806 aaPredicted RBP23.33■■□□□ 1.33
NELFA-213ENST00000467661 TULP4Q9NRJ4 1543 aa23.33■■□□□ 1.32
NELFA-213ENST00000467661 ZMYM3Q14202 1370 aa23.32■■□□□ 1.32
NELFA-213ENST00000467661 SPATA31D1Q6ZQQ2 1576 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms