RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 TMEM131LA2VDJ0 1609 aa22.58■■□□□ 1.21
ATPAF2-204ENST00000467560 XIRP1Q702N8 1843 aaKnown RBP22.58■■□□□ 1.21
ATPAF2-204ENST00000467560 MYO5BQ9ULV0 1848 aa22.58■■□□□ 1.21
ATPAF2-204ENST00000467560 KCNA6P17658 529 aa22.56■■□□□ 1.2
ATPAF2-204ENST00000467560 RBM33Q96EV2 1170 aaKnown RBP22.56■■□□□ 1.2
ATPAF2-204ENST00000467560 RIMS2Q9UQ26 1411 aa22.56■■□□□ 1.2
ATPAF2-204ENST00000467560 CHGAP10645 457 aaKnown RBP22.54■■□□□ 1.2
ATPAF2-204ENST00000467560 TMEM94Q12767 1356 aa22.53■■□□□ 1.2
ATPAF2-204ENST00000467560 NUTM2DQ5VT03 806 aaPredicted RBP22.53■■□□□ 1.2
ATPAF2-204ENST00000467560 PLEKHG1Q9ULL1 1385 aa22.52■■□□□ 1.2
ATPAF2-204ENST00000467560 BCANQ96GW7 911 aa22.52■■□□□ 1.2
ATPAF2-204ENST00000467560 NAIPQ13075 1403 aa22.49■■□□□ 1.19
ATPAF2-204ENST00000467560 PPP1R15AO75807 674 aaPredicted RBP22.49■■□□□ 1.19
ATPAF2-204ENST00000467560 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
ATPAF2-204ENST00000467560 PROSER2Q86WR7 435 aaPredicted RBP22.48■■□□□ 1.19
ATPAF2-204ENST00000467560 ADAMTS13Q76LX8 1427 aa22.46■■□□□ 1.19
ATPAF2-204ENST00000467560 MED1Q15648 1581 aaPredicted RBP22.46■■□□□ 1.19
ATPAF2-204ENST00000467560 NKTRP30414 1462 aaKnown RBP22.44■■□□□ 1.18
ATPAF2-204ENST00000467560 HDGFP51858 240 aaKnown RBP22.43■■□□□ 1.18
ATPAF2-204ENST00000467560 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.43■■□□□ 1.18
ATPAF2-204ENST00000467560 TBX22Q9Y458 520 aa22.43■■□□□ 1.18
ATPAF2-204ENST00000467560 SOCS7O14512 581 aa22.41■■□□□ 1.18
ATPAF2-204ENST00000467560 CHD2O14647 1828 aaKnown RBP22.41■■□□□ 1.18
ATPAF2-204ENST00000467560 SPHKAPQ2M3C7 1700 aa22.4■■□□□ 1.18
ATPAF2-204ENST00000467560 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
ATPAF2-204ENST00000467560 HFM1A2PYH4 1435 aa22.38■■□□□ 1.17
ATPAF2-204ENST00000467560 CLTCL1P53675 1640 aa22.36■■□□□ 1.17
ATPAF2-204ENST00000467560 PTPRUQ92729 1446 aa22.36■■□□□ 1.17
ATPAF2-204ENST00000467560 MSH6P52701 1360 aa22.34■■□□□ 1.17
ATPAF2-204ENST00000467560 NRXN3Q9Y4C0 1643 aa22.34■■□□□ 1.17
ATPAF2-204ENST00000467560 ROBO1Q9Y6N7 1651 aa22.33■■□□□ 1.17
ATPAF2-204ENST00000467560 TRPM2O94759 1503 aa22.33■■□□□ 1.17
ATPAF2-204ENST00000467560 ZNF326Q5BKZ1 582 aaKnown RBP22.33■■□□□ 1.17
ATPAF2-204ENST00000467560 DIP2AQ14689 1571 aa22.33■■□□□ 1.16
ATPAF2-204ENST00000467560 TRIM52Q96A61 297 aa22.32■■□□□ 1.16
ATPAF2-204ENST00000467560 PIK3R4Q99570 1358 aa22.31■■□□□ 1.16
ATPAF2-204ENST00000467560 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
ATPAF2-204ENST00000467560 AMOTL2Q9Y2J4 779 aa22.3■■□□□ 1.16
ATPAF2-204ENST00000467560 NEXMIFQ5QGS0 1516 aa22.29■■□□□ 1.16
ATPAF2-204ENST00000467560 SETBP1Q9Y6X0 1596 aa22.29■■□□□ 1.16
ATPAF2-204ENST00000467560 METP08581 1390 aa22.28■■□□□ 1.16
ATPAF2-204ENST00000467560 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
ATPAF2-204ENST00000467560 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
ATPAF2-204ENST00000467560 FOXD1Q16676 465 aa22.25■■□□□ 1.15
ATPAF2-204ENST00000467560 C14orf37Q86TY3 774 aa22.25■■□□□ 1.15
ATPAF2-204ENST00000467560 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
ATPAF2-204ENST00000467560 RGS17Q9UGC6 210 aaPredicted RBP22.25■■□□□ 1.15
ATPAF2-204ENST00000467560 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
ATPAF2-204ENST00000467560 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.23■■□□□ 1.15
ATPAF2-204ENST00000467560 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
ATPAF2-204ENST00000467560 KIF1BO60333 1816 aa22.2■■□□□ 1.14
ATPAF2-204ENST00000467560 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
ATPAF2-204ENST00000467560 ATF3P18847 181 aa22.17■■□□□ 1.14
ATPAF2-204ENST00000467560 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
ATPAF2-204ENST00000467560 COL16A1Q07092 1604 aaPredicted RBP22.15■■□□□ 1.14
ATPAF2-204ENST00000467560 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
ATPAF2-204ENST00000467560 BRINP3Q76B58 766 aa22.13■■□□□ 1.13
ATPAF2-204ENST00000467560 SETD1AO15047 1707 aaKnown RBP22.12■■□□□ 1.13
ATPAF2-204ENST00000467560 VGFO15240 615 aaPredicted RBP22.12■■□□□ 1.13
ATPAF2-204ENST00000467560 JCADQ9P266 1359 aa22.12■■□□□ 1.13
ATPAF2-204ENST00000467560 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
ATPAF2-204ENST00000467560 MST1RQ04912 1400 aa22.11■■□□□ 1.13
ATPAF2-204ENST00000467560 DCCP43146 1447 aa22.1■■□□□ 1.13
ATPAF2-204ENST00000467560 AHDC1Q5TGY3 1603 aaPredicted RBP22.09■■□□□ 1.13
ATPAF2-204ENST00000467560 POTEAQ6S8J7 498 aa22.09■■□□□ 1.13
ATPAF2-204ENST00000467560 PPLO60437 1756 aa22.09■■□□□ 1.13
ATPAF2-204ENST00000467560 ROBO2Q9HCK4 1378 aa22.09■■□□□ 1.13
ATPAF2-204ENST00000467560 SPATA31E1Q6ZUB1 1445 aa22.08■■□□□ 1.13
ATPAF2-204ENST00000467560 ADGRL3Q9HAR2 1447 aa22.08■■□□□ 1.13
ATPAF2-204ENST00000467560 ADGRF5Q8IZF2 1346 aa22.07■■□□□ 1.12
ATPAF2-204ENST00000467560 NALCNQ8IZF0 1738 aa22.07■■□□□ 1.12
ATPAF2-204ENST00000467560 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
ATPAF2-204ENST00000467560 ASXL1Q8IXJ9 1541 aa22.06■■□□□ 1.12
ATPAF2-204ENST00000467560 LRP6O75581 1613 aa22.06■■□□□ 1.12
ATPAF2-204ENST00000467560 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
ATPAF2-204ENST00000467560 PTCH1Q13635 1447 aa22.05■■□□□ 1.12
ATPAF2-204ENST00000467560 DDX17Q92841 729 aaKnown RBP22.04■■□□□ 1.12
ATPAF2-204ENST00000467560 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
ATPAF2-204ENST00000467560 PRAG1Q86YV5 1406 aa22.02■■□□□ 1.12
ATPAF2-204ENST00000467560 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
ATPAF2-204ENST00000467560 SPATA31A6Q5VVP1 1343 aa21.99■■□□□ 1.11
ATPAF2-204ENST00000467560 C1orf167Q5SNV9 1468 aa21.98■■□□□ 1.11
ATPAF2-204ENST00000467560 NHSL1Q5SYE7 1610 aa21.98■■□□□ 1.11
ATPAF2-204ENST00000467560 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
ATPAF2-204ENST00000467560 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
ATPAF2-204ENST00000467560 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
ATPAF2-204ENST00000467560 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
ATPAF2-204ENST00000467560 ORAI2Q96SN7 254 aa21.95■■□□□ 1.1
ATPAF2-204ENST00000467560 STK26Q9P289 416 aa21.94■■□□□ 1.1
ATPAF2-204ENST00000467560 PIK3C2GO75747 1445 aa21.94■■□□□ 1.1
ATPAF2-204ENST00000467560 NUTM2BA6NNL0 878 aaPredicted RBP21.93■■□□□ 1.1
ATPAF2-204ENST00000467560 NUTM2EB1AL46 878 aaPredicted RBP21.93■■□□□ 1.1
ATPAF2-204ENST00000467560 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
ATPAF2-204ENST00000467560 NUTM2AQ8IVF1 878 aaPredicted RBP21.93■■□□□ 1.1
ATPAF2-204ENST00000467560 PLEKHH1Q9ULM0 1364 aa21.91■■□□□ 1.1
ATPAF2-204ENST00000467560 MEX3CQ5U5Q3 659 aaKnown RBP21.91■■□□□ 1.1
ATPAF2-204ENST00000467560 TECPR2O15040 1411 aa21.9■■□□□ 1.1
ATPAF2-204ENST00000467560 LRPPRCP42704 1394 aaKnown RBP21.9■■□□□ 1.1
ATPAF2-204ENST00000467560 LRRC59Q96AG4 307 aaKnown RBP21.9■■□□□ 1.1
ATPAF2-204ENST00000467560 PNPLA6Q8IY17 1366 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms