RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 PADI6Q6TGC4 694 aa7.24□□□□□ -1.25
MSH2-205ENST00000467323 NUTM1Q86Y26 1132 aa7.24□□□□□ -1.25
MSH2-205ENST00000467323 ZNF710Q8N1W2 664 aa7.24□□□□□ -1.25
MSH2-205ENST00000467323 RBM46Q8TBY0 533 aaKnown RBP7.24□□□□□ -1.25
MSH2-205ENST00000467323 PCDHGA10Q9Y5H3 936 aa7.24□□□□□ -1.25
MSH2-205ENST00000467323 SLC34A2O95436 690 aa7.23□□□□□ -1.25
MSH2-205ENST00000467323 HMGB1P09429 215 aaKnown RBP7.23□□□□□ -1.25
MSH2-205ENST00000467323 PLCG2P16885 1265 aa7.23□□□□□ -1.25
MSH2-205ENST00000467323 CFAP70Q5T0N1 1121 aa7.23□□□□□ -1.25
MSH2-205ENST00000467323 RSBN1LQ6PCB5 846 aaPredicted RBP7.23□□□□□ -1.25
MSH2-205ENST00000467323 TMEM92Q6UXU6 159 aa7.23□□□□□ -1.25
MSH2-205ENST00000467323 IVNS1ABPQ9Y6Y0 642 aa7.23□□□□□ -1.25
MSH2-205ENST00000467323 USP17L8P0C7I0 530 aa7.22□□□□□ -1.25
MSH2-205ENST00000467323 PPP1R12CQ9BZL4 782 aa7.22□□□□□ -1.25
MSH2-205ENST00000467323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.21□□□□□ -1.26
MSH2-205ENST00000467323 LILRB3O75022 631 aa7.21□□□□□ -1.26
MSH2-205ENST00000467323 SRPK2P78362 688 aaKnown RBP7.21□□□□□ -1.26
MSH2-205ENST00000467323 CSPP1Q1MSJ5 1256 aa7.21□□□□□ -1.26
MSH2-205ENST00000467323 SULF1Q8IWU6 871 aa7.21□□□□□ -1.26
MSH2-205ENST00000467323 VRTNQ9H8Y1 702 aa7.21□□□□□ -1.26
MSH2-205ENST00000467323 NUTM2BA6NNL0 878 aaPredicted RBP7.2□□□□□ -1.26
MSH2-205ENST00000467323 NUTM2EB1AL46 878 aaPredicted RBP7.2□□□□□ -1.26
MSH2-205ENST00000467323 CD46P15529 392 aa7.2□□□□□ -1.26
MSH2-205ENST00000467323 NUTM2DQ5VT03 806 aaPredicted RBP7.2□□□□□ -1.26
MSH2-205ENST00000467323 B4GALNT3Q6L9W6 998 aa7.2□□□□□ -1.26
MSH2-205ENST00000467323 NUTM2AQ8IVF1 878 aaPredicted RBP7.2□□□□□ -1.26
MSH2-205ENST00000467323 JPH4Q96JJ6 628 aa7.2□□□□□ -1.26
MSH2-205ENST00000467323 C19orf67A6NJJ6 358 aa7.19□□□□□ -1.26
MSH2-205ENST00000467323 PRPF38BQ5VTL8 546 aaKnown RBP7.19□□□□□ -1.26
MSH2-205ENST00000467323 TTC13Q8NBP0 860 aa7.19□□□□□ -1.26
MSH2-205ENST00000467323 ADAMTS19Q8TE59 1207 aa7.19□□□□□ -1.26
MSH2-205ENST00000467323 MOXD2PA6NHM9 499 aa7.18□□□□□ -1.26
MSH2-205ENST00000467323 CLCN6P51797 869 aa7.18□□□□□ -1.26
MSH2-205ENST00000467323 ATN1P54259 1190 aaPredicted RBP7.18□□□□□ -1.26
MSH2-205ENST00000467323 QPCTQ16769 361 aa7.18□□□□□ -1.26
MSH2-205ENST00000467323 PALM3A6NDB9 673 aaPredicted RBP7.17□□□□□ -1.26
MSH2-205ENST00000467323 GALR2O43603 387 aaPredicted RBP7.17□□□□□ -1.26
MSH2-205ENST00000467323 ATG7O95352 703 aa7.17□□□□□ -1.26
MSH2-205ENST00000467323 LMOD1P29536 600 aaPredicted RBP7.17□□□□□ -1.26
MSH2-205ENST00000467323 RTL5Q5HYW3 569 aaPredicted RBP7.17□□□□□ -1.26
MSH2-205ENST00000467323 C6orf132Q5T0Z8 1188 aa7.17□□□□□ -1.26
MSH2-205ENST00000467323 GJD4Q96KN9 370 aaPredicted RBP7.17□□□□□ -1.26
MSH2-205ENST00000467323 SOX11P35716 441 aa7.16□□□□□ -1.26
MSH2-205ENST00000467323 PRSS12P56730 875 aa7.16□□□□□ -1.26
MSH2-205ENST00000467323 USP35Q9P2H5 1018 aa7.16□□□□□ -1.26
MSH2-205ENST00000467323 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
MSH2-205ENST00000467323 ALG2Q9H553 416 aa7.15□□□□□ -1.26
MSH2-205ENST00000467323 ZBTB3Q9H5J0 574 aa7.15□□□□□ -1.26
MSH2-205ENST00000467323 RCCD1A6NED2 376 aa7.14□□□□□ -1.27
MSH2-205ENST00000467323 TMEM88BA6NKF7 163 aa7.14□□□□□ -1.27
MSH2-205ENST00000467323 NDUFV2P19404 249 aa7.14□□□□□ -1.27
MSH2-205ENST00000467323 VAC14Q08AM6 782 aa7.14□□□□□ -1.27
MSH2-205ENST00000467323 PCDHB15Q9Y5E8 787 aa7.14□□□□□ -1.27
MSH2-205ENST00000467323 CARNS1A5YM72 827 aa7.13□□□□□ -1.27
MSH2-205ENST00000467323 DDX11L8A8MPP1 907 aa7.13□□□□□ -1.27
MSH2-205ENST00000467323 ATMINO43313 823 aaPredicted RBP7.13□□□□□ -1.27
MSH2-205ENST00000467323 HSP90B1P14625 803 aaKnown RBP7.13□□□□□ -1.27
MSH2-205ENST00000467323 FOSBP53539 338 aa7.13□□□□□ -1.27
MSH2-205ENST00000467323 RSPH4AQ5TD94 716 aa7.13□□□□□ -1.27
MSH2-205ENST00000467323 ZDHHC16Q969W1 377 aa7.13□□□□□ -1.27
MSH2-205ENST00000467323 CDCA7LQ96GN5 454 aa7.13□□□□□ -1.27
MSH2-205ENST00000467323 TFIP11Q9UBB9 837 aaKnown RBP7.13□□□□□ -1.27
MSH2-205ENST00000467323 RBM47A0AV96 593 aaKnown RBP7.12□□□□□ -1.27
MSH2-205ENST00000467323 ERCC3P19447 782 aa7.12□□□□□ -1.27
MSH2-205ENST00000467323 USP46P62068 366 aa7.12□□□□□ -1.27
MSH2-205ENST00000467323 ASTLQ6HA08 431 aaPredicted RBP7.12□□□□□ -1.27
MSH2-205ENST00000467323 CCER1Q8TC90 406 aaPredicted RBP7.12□□□□□ -1.27
MSH2-205ENST00000467323 CABLES1Q8TDN4 633 aa7.12□□□□□ -1.27
MSH2-205ENST00000467323 PCDHGA4Q9Y5G9 962 aa7.12□□□□□ -1.27
MSH2-205ENST00000467323 SEC24BO95487 1268 aa7.11□□□□□ -1.27
MSH2-205ENST00000467323 C3orf67Q6ZVT6 689 aa7.11□□□□□ -1.27
MSH2-205ENST00000467323 HELBQ8NG08 1087 aaPredicted RBP7.11□□□□□ -1.27
MSH2-205ENST00000467323 KDM4AO75164 1064 aa7.1□□□□□ -1.27
MSH2-205ENST00000467323 DNAJB2P25686 324 aa7.1□□□□□ -1.27
MSH2-205ENST00000467323 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
MSH2-205ENST00000467323 EYA1Q99502 592 aa7.1□□□□□ -1.27
MSH2-205ENST00000467323 TRIM34Q9BYJ4 488 aa7.1□□□□□ -1.27
MSH2-205ENST00000467323 CDCA8Q53HL2 280 aa7.09□□□□□ -1.27
MSH2-205ENST00000467323 PNMA1Q8ND90 353 aa7.09□□□□□ -1.27
MSH2-205ENST00000467323 PUS7Q96PZ0 661 aaKnown RBP7.09□□□□□ -1.27
MSH2-205ENST00000467323 UCN2Q96RP3 112 aa7.09□□□□□ -1.27
MSH2-205ENST00000467323 MAFBQ9Y5Q3 323 aaPredicted RBP7.09□□□□□ -1.27
MSH2-205ENST00000467323 UNCXA6NJT0 531 aa7.08□□□□□ -1.28
MSH2-205ENST00000467323 GPR37L1O60883 481 aa7.08□□□□□ -1.28
MSH2-205ENST00000467323 CTDSPL2Q05D32 466 aa7.08□□□□□ -1.28
MSH2-205ENST00000467323 ZNF454Q8N9F8 522 aa7.08□□□□□ -1.28
MSH2-205ENST00000467323 RDH13Q8NBN7 331 aa7.08□□□□□ -1.28
MSH2-205ENST00000467323 PRR7Q8TB68 274 aa7.08□□□□□ -1.28
MSH2-205ENST00000467323 HMX1Q9NP08 348 aaPredicted RBP7.08□□□□□ -1.28
MSH2-205ENST00000467323 FDX1P10109 184 aa7.07□□□□□ -1.28
MSH2-205ENST00000467323 ELOAQ14241 798 aaKnown RBP7.07□□□□□ -1.28
MSH2-205ENST00000467323 KDM4FA0A1W2PPD8 638 aa7.06□□□□□ -1.28
MSH2-205ENST00000467323 NBPF26B4DH59 902 aa7.06□□□□□ -1.28
MSH2-205ENST00000467323 HOXA2O43364 376 aa7.06□□□□□ -1.28
MSH2-205ENST00000467323 ATP9BO43861 1147 aa7.06□□□□□ -1.28
MSH2-205ENST00000467323 CDK11BP21127 795 aaKnown RBP7.06□□□□□ -1.28
MSH2-205ENST00000467323 ADAM33Q9BZ11 813 aa7.06□□□□□ -1.28
MSH2-205ENST00000467323 TMEM134Q9H6X4 195 aa7.06□□□□□ -1.28
MSH2-205ENST00000467323 CDK11AQ9UQ88 783 aaPredicted RBP7.06□□□□□ -1.28
MSH2-205ENST00000467323 EIF4G2P78344 907 aaKnown RBP eCLIP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms